EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000028591 (Gene tree)
Gene ID: 110211552
Gene Symbol: -
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 22216 bases
Position: chrFUWB01002208.1:326902-349117
Accession: 110211552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038887	RRM_1	PF00076.22	4e-16	1	1
ENSPCIP00000038889	RRM_1	PF00076.22	4.1e-16	1	1
ENSPCIP00000038889	RRM_3	PF08777.11	4.7e-31	1	1
ENSPCIP00000038887	RRM_3	PF08777.11	5e-31	1	1
ENSPCIP00000038887	La	PF05383.17	3.4e-21	1	1
ENSPCIP00000038889	La	PF05383.17	3.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000047890	-	1567	XM_020990936	ENSPCIP00000038889	406 (aa)	XP_020846595	UPI000A28B6CC
ENSPCIT00000047888	-	4908	-	ENSPCIP00000038887	402 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028591's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028591's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028591	-	100	82.641	ENSG00000138385	SSB	100	85.870	Homo_sapiens
ENSPCIG00000028591	-	99	56.158	ENSAPOG00000003448	ssb	99	56.667	Acanthochromis_polyacanthus
ENSPCIG00000028591	-	100	80.285	ENSAMEG00000010507	SSB	100	78.333	Ailuropoda_melanoleuca
ENSPCIG00000028591	-	93	58.245	ENSACIG00000001738	ssb	97	58.245	Amphilophus_citrinellus
ENSPCIG00000028591	-	99	56.404	ENSAOCG00000020398	ssb	99	56.923	Amphiprion_ocellaris
ENSPCIG00000028591	-	99	56.650	ENSAPEG00000020395	ssb	99	57.179	Amphiprion_percula
ENSPCIG00000028591	-	99	59.606	ENSATEG00000016884	ssb	99	58.438	Anabas_testudineus
ENSPCIG00000028591	-	100	71.934	ENSAPLG00000006109	SSB	100	69.976	Anas_platyrhynchos
ENSPCIG00000028591	-	100	68.370	ENSACAG00000017008	SSB	99	67.883	Anolis_carolinensis
ENSPCIG00000028591	-	100	72.167	ENSANAG00000027195	-	100	72.660	Aotus_nancymaae
ENSPCIG00000028591	-	99	53.827	ENSACLG00000010798	ssb	100	53.827	Astatotilapia_calliptera
ENSPCIG00000028591	-	98	55.392	ENSAMXG00000012606	ssb	96	55.611	Astyanax_mexicanus
ENSPCIG00000028591	-	100	83.005	ENSBTAG00000008716	SSB	100	82.512	Bos_taurus
ENSPCIG00000028591	-	75	36.928	WBGene00016653	C44E4.4	77	37.582	Caenorhabditis_elegans
ENSPCIG00000028591	-	100	82.512	ENSCJAG00000045073	SSB	100	82.266	Callithrix_jacchus
ENSPCIG00000028591	-	100	83.292	ENSCAFG00000012418	SSB	100	82.555	Canis_familiaris
ENSPCIG00000028591	-	100	83.292	ENSCAFG00020002900	SSB	100	82.555	Canis_lupus_dingo
ENSPCIG00000028591	-	100	83.251	ENSCHIG00000022624	-	100	83.005	Capra_hircus
ENSPCIG00000028591	-	100	77.340	ENSCHIG00000022196	-	100	77.094	Capra_hircus
ENSPCIG00000028591	-	100	83.251	ENSTSYG00000000097	SSB	100	83.005	Carlito_syrichta
ENSPCIG00000028591	-	100	84.729	ENSCPOG00000003338	SSB	100	84.483	Cavia_porcellus
ENSPCIG00000028591	-	100	83.251	ENSCCAG00000035147	SSB	100	83.251	Cebus_capucinus
ENSPCIG00000028591	-	78	75.380	ENSCATG00000036701	SSB	93	75.076	Cercocebus_atys
ENSPCIG00000028591	-	100	61.330	ENSCATG00000042909	-	100	61.084	Cercocebus_atys
ENSPCIG00000028591	-	100	85.222	ENSCLAG00000015617	-	100	84.975	Chinchilla_lanigera
ENSPCIG00000028591	-	98	75.628	ENSCSAG00000018390	-	96	76.302	Chlorocebus_sabaeus
ENSPCIG00000028591	-	100	83.005	ENSCSAG00000015200	SSB	89	82.759	Chlorocebus_sabaeus
ENSPCIG00000028591	-	100	84.729	ENSCHOG00000007763	SSB	100	84.483	Choloepus_hoffmanni
ENSPCIG00000028591	-	100	78.537	ENSCPBG00000006519	SSB	100	78.049	Chrysemys_picta_bellii
ENSPCIG00000028591	-	99	63.750	ENSCANG00000028838	-	95	62.000	Colobus_angolensis_palliatus
ENSPCIG00000028591	-	100	82.759	ENSCANG00000027695	SSB	100	80.296	Colobus_angolensis_palliatus
ENSPCIG00000028591	-	100	70.443	ENSCANG00000033240	-	100	70.443	Colobus_angolensis_palliatus
ENSPCIG00000028591	-	100	71.220	ENSCGRG00001024831	Ssb	100	73.479	Cricetulus_griseus_chok1gshd
ENSPCIG00000028591	-	100	71.220	ENSCGRG00000005387	Ssb	100	73.479	Cricetulus_griseus_crigri
ENSPCIG00000028591	-	98	57.143	ENSCSEG00000011599	ssb	98	56.489	Cynoglossus_semilaevis
ENSPCIG00000028591	-	99	57.494	ENSCVAG00000021558	ssb	94	58.421	Cyprinodon_variegatus
ENSPCIG00000028591	-	98	57.468	ENSDARG00000029252	ssb	96	56.784	Danio_rerio
ENSPCIG00000028591	-	100	84.483	ENSDNOG00000013450	SSB	100	82.020	Dasypus_novemcinctus
ENSPCIG00000028591	-	100	74.696	ENSDORG00000005543	Ssb	100	74.696	Dipodomys_ordii
ENSPCIG00000028591	-	88	33.067	FBgn0011638	La	84	34.770	Drosophila_melanogaster
ENSPCIG00000028591	-	57	84.080	ENSETEG00000004614	-	52	84.080	Echinops_telfairi
ENSPCIG00000028591	-	96	46.292	ENSEBUG00000001237	ssb	94	47.826	Eptatretus_burgeri
ENSPCIG00000028591	-	100	83.498	ENSEASG00005022835	SSB	100	83.251	Equus_asinus_asinus
ENSPCIG00000028591	-	100	83.744	ENSECAG00000018495	SSB	100	83.498	Equus_caballus
ENSPCIG00000028591	-	76	68.627	ENSEEUG00000008077	SSB	78	68.627	Erinaceus_europaeus
ENSPCIG00000028591	-	99	60.488	ENSELUG00000020929	ssb	94	61.039	Esox_lucius
ENSPCIG00000028591	-	100	82.801	ENSFCAG00000011601	SSB	100	82.064	Felis_catus
ENSPCIG00000028591	-	100	74.817	ENSFALG00000000930	SSB	100	74.328	Ficedula_albicollis
ENSPCIG00000028591	-	100	84.236	ENSFDAG00000000598	SSB	100	83.990	Fukomys_damarensis
ENSPCIG00000028591	-	73	55.333	ENSFHEG00000003268	ssb	96	54.839	Fundulus_heteroclitus
ENSPCIG00000028591	-	97	56.188	ENSGMOG00000002664	ssb	99	56.188	Gadus_morhua
ENSPCIG00000028591	-	100	75.795	ENSGALG00000009677	SSB	100	74.083	Gallus_gallus
ENSPCIG00000028591	-	99	55.419	ENSGAFG00000002749	ssb	100	55.419	Gambusia_affinis
ENSPCIG00000028591	-	99	55.340	ENSGACG00000005107	ssb	94	56.168	Gasterosteus_aculeatus
ENSPCIG00000028591	-	100	78.293	ENSGAGG00000007807	SSB	100	77.805	Gopherus_agassizii
ENSPCIG00000028591	-	55	79.204	ENSGGOG00000023471	-	92	79.295	Gorilla_gorilla
ENSPCIG00000028591	-	100	68.227	ENSGGOG00000024891	-	100	66.010	Gorilla_gorilla
ENSPCIG00000028591	-	99	53.333	ENSHBUG00000006584	ssb	93	55.348	Haplochromis_burtoni
ENSPCIG00000028591	-	100	82.809	ENSHGLG00000017580	-	100	82.039	Heterocephalus_glaber_female
ENSPCIG00000028591	-	100	76.716	ENSHGLG00000004478	-	100	74.510	Heterocephalus_glaber_female
ENSPCIG00000028591	-	100	75.676	ENSHGLG00000005832	-	100	75.123	Heterocephalus_glaber_female
ENSPCIG00000028591	-	100	72.906	ENSHGLG00100008767	-	100	71.990	Heterocephalus_glaber_male
ENSPCIG00000028591	-	100	82.809	ENSHGLG00100003084	-	100	82.039	Heterocephalus_glaber_male
ENSPCIG00000028591	-	98	55.528	ENSHCOG00000019011	ssb	95	55.703	Hippocampus_comes
ENSPCIG00000028591	-	96	59.432	ENSIPUG00000003681	SSB	94	58.974	Ictalurus_punctatus
ENSPCIG00000028591	-	100	83.005	ENSSTOG00000008416	SSB	100	83.005	Ictidomys_tridecemlineatus
ENSPCIG00000028591	-	100	70.047	ENSJJAG00000023158	-	100	67.849	Jaculus_jaculus
ENSPCIG00000028591	-	99	59.553	ENSJJAG00000016250	-	99	59.553	Jaculus_jaculus
ENSPCIG00000028591	-	99	56.897	ENSKMAG00000017317	ssb	93	58.667	Kryptolebias_marmoratus
ENSPCIG00000028591	-	99	55.172	ENSLBEG00000017345	ssb	99	55.556	Labrus_bergylta
ENSPCIG00000028591	-	99	67.476	ENSLACG00000014056	SSB	99	68.627	Latimeria_chalumnae
ENSPCIG00000028591	-	98	66.833	ENSLOCG00000007933	ssb	99	66.085	Lepisosteus_oculatus
ENSPCIG00000028591	-	100	77.014	ENSLAFG00000000867	-	100	77.488	Loxodonta_africana
ENSPCIG00000028591	-	75	64.570	ENSLAFG00000026721	-	99	64.570	Loxodonta_africana
ENSPCIG00000028591	-	100	69.704	ENSLAFG00000028909	-	100	68.719	Loxodonta_africana
ENSPCIG00000028591	-	89	72.067	ENSMFAG00000041478	-	91	74.006	Macaca_fascicularis
ENSPCIG00000028591	-	100	82.759	ENSMFAG00000039066	SSB	100	82.512	Macaca_fascicularis
ENSPCIG00000028591	-	99	57.921	ENSMMUG00000039889	-	100	58.168	Macaca_mulatta
ENSPCIG00000028591	-	100	70.197	ENSMMUG00000011724	-	97	70.197	Macaca_mulatta
ENSPCIG00000028591	-	100	82.759	ENSMMUG00000023051	SSB	100	82.512	Macaca_mulatta
ENSPCIG00000028591	-	89	72.067	ENSMNEG00000034698	-	91	74.006	Macaca_nemestrina
ENSPCIG00000028591	-	100	71.602	ENSMNEG00000028321	SSB	100	71.046	Macaca_nemestrina
ENSPCIG00000028591	-	100	82.759	ENSMLEG00000035717	SSB	100	82.512	Mandrillus_leucophaeus
ENSPCIG00000028591	-	100	59.360	ENSMLEG00000042644	-	100	58.867	Mandrillus_leucophaeus
ENSPCIG00000028591	-	99	59.360	ENSMAMG00000004800	ssb	93	61.067	Mastacembelus_armatus
ENSPCIG00000028591	-	99	53.827	ENSMZEG00005005749	ssb	100	53.827	Maylandia_zebra
ENSPCIG00000028591	-	100	76.039	ENSMGAG00000010328	SSB	100	77.670	Meleagris_gallopavo
ENSPCIG00000028591	-	98	75.628	ENSMICG00000033304	-	93	79.452	Microcebus_murinus
ENSPCIG00000028591	-	99	83.416	ENSMICG00000028252	-	99	83.168	Microcebus_murinus
ENSPCIG00000028591	-	100	90.120	ENSMODG00000008227	-	100	90.120	Monodelphis_domestica
ENSPCIG00000028591	-	100	79.803	ENSMODG00000019271	-	100	65.854	Monodelphis_domestica
ENSPCIG00000028591	-	100	72.660	ENSMODG00000007027	-	100	71.182	Monodelphis_domestica
ENSPCIG00000028591	-	91	58.856	ENSMALG00000008045	ssb	90	58.824	Monopterus_albus
ENSPCIG00000028591	-	100	72.275	MGP_CAROLIEiJ_G0023629	-	100	83.152	Mus_caroli
ENSPCIG00000028591	-	100	71.801	ENSMUSG00000068882	Ssb	100	83.152	Mus_musculus
ENSPCIG00000028591	-	100	71.090	MGP_PahariEiJ_G0025081	-	100	82.065	Mus_pahari
ENSPCIG00000028591	-	100	71.801	MGP_SPRETEiJ_G0024551	Ssb	100	83.152	Mus_spretus
ENSPCIG00000028591	-	100	83.251	ENSMPUG00000000785	SSB	100	83.005	Mustela_putorius_furo
ENSPCIG00000028591	-	100	79.572	ENSMLUG00000016316	SSB	100	77.619	Myotis_lucifugus
ENSPCIG00000028591	-	99	53.827	ENSNBRG00000012661	ssb	100	53.827	Neolamprologus_brichardi
ENSPCIG00000028591	-	100	83.005	ENSNLEG00000004958	SSB	100	82.759	Nomascus_leucogenys
ENSPCIG00000028591	-	100	62.287	ENSNLEG00000028754	-	100	62.654	Nomascus_leucogenys
ENSPCIG00000028591	-	62	100.000	ENSMEUG00000001650	-	100	100.000	Notamacropus_eugenii
ENSPCIG00000028591	-	53	89.677	ENSOPRG00000008475	-	76	89.677	Ochotona_princeps
ENSPCIG00000028591	-	93	81.003	ENSODEG00000004202	-	100	80.475	Octodon_degus
ENSPCIG00000028591	-	99	54.321	ENSONIG00000008776	ssb	93	55.882	Oreochromis_niloticus
ENSPCIG00000028591	-	100	86.946	ENSOANG00000008543	SSB	100	86.946	Ornithorhynchus_anatinus
ENSPCIG00000028591	-	100	83.744	ENSOCUG00000010396	SSB	100	81.281	Oryctolagus_cuniculus
ENSPCIG00000028591	-	99	56.650	ENSORLG00000017208	ssb	95	56.995	Oryzias_latipes
ENSPCIG00000028591	-	99	56.650	ENSORLG00020022574	ssb	99	56.140	Oryzias_latipes_hni
ENSPCIG00000028591	-	99	56.897	ENSORLG00015016592	ssb	95	57.662	Oryzias_latipes_hsok
ENSPCIG00000028591	-	99	58.272	ENSOMEG00000003193	ssb	95	58.854	Oryzias_melastigma
ENSPCIG00000028591	-	100	78.251	ENSOGAG00000029768	SSB	100	77.014	Otolemur_garnettii
ENSPCIG00000028591	-	100	83.498	ENSOARG00000002906	SSB	100	83.251	Ovis_aries
ENSPCIG00000028591	-	100	82.641	ENSPPAG00000042673	SSB	100	82.396	Pan_paniscus
ENSPCIG00000028591	-	100	67.488	ENSPPAG00000032427	-	100	74.419	Pan_paniscus
ENSPCIG00000028591	-	91	68.097	ENSPPAG00000006189	-	96	65.952	Pan_paniscus
ENSPCIG00000028591	-	100	82.801	ENSPPRG00000006599	SSB	100	82.064	Panthera_pardus
ENSPCIG00000028591	-	100	82.555	ENSPTIG00000011021	SSB	97	82.064	Panthera_tigris_altaica
ENSPCIG00000028591	-	100	82.641	ENSPTRG00000012620	SSB	100	82.396	Pan_troglodytes
ENSPCIG00000028591	-	100	64.286	ENSPTRG00000042880	-	100	62.069	Pan_troglodytes
ENSPCIG00000028591	-	100	60.099	ENSPANG00000034126	-	100	59.413	Papio_anubis
ENSPCIG00000028591	-	100	82.759	ENSPANG00000007440	SSB	100	82.512	Papio_anubis
ENSPCIG00000028591	-	98	57.750	ENSPANG00000031877	-	95	54.774	Papio_anubis
ENSPCIG00000028591	-	99	62.222	ENSPKIG00000019325	ssb	99	61.728	Paramormyrops_kingsleyae
ENSPCIG00000028591	-	100	76.098	ENSPSIG00000002265	SSB	93	75.610	Pelodiscus_sinensis
ENSPCIG00000028591	-	85	56.196	ENSPMGG00000020075	ssb	93	55.556	Periophthalmus_magnuspinnatus
ENSPCIG00000028591	-	82	53.030	ENSPMAG00000002982	ssb	89	50.392	Petromyzon_marinus
ENSPCIG00000028591	-	99	56.650	ENSPFOG00000009650	ssb	95	57.812	Poecilia_formosa
ENSPCIG00000028591	-	99	56.650	ENSPLAG00000020498	ssb	95	57.812	Poecilia_latipinna
ENSPCIG00000028591	-	99	56.404	ENSPMEG00000001051	ssb	95	57.552	Poecilia_mexicana
ENSPCIG00000028591	-	92	58.713	ENSPREG00000003708	ssb	97	58.713	Poecilia_reticulata
ENSPCIG00000028591	-	100	83.005	ENSPPYG00000012919	SSB	100	82.759	Pongo_abelii
ENSPCIG00000028591	-	95	79.167	ENSPCAG00000010276	SSB	100	79.167	Procavia_capensis
ENSPCIG00000028591	-	100	80.542	ENSPCOG00000015741	-	100	80.296	Propithecus_coquereli
ENSPCIG00000028591	-	100	72.167	ENSPCOG00000023189	-	100	71.921	Propithecus_coquereli
ENSPCIG00000028591	-	88	85.836	ENSPVAG00000006615	SSB	99	84.136	Pteropus_vampyrus
ENSPCIG00000028591	-	99	53.827	ENSPNYG00000006444	ssb	100	53.827	Pundamilia_nyererei
ENSPCIG00000028591	-	98	56.757	ENSPNAG00000011708	ssb	96	57.320	Pygocentrus_nattereri
ENSPCIG00000028591	-	100	71.327	ENSRNOG00000007998	Ssb	100	70.379	Rattus_norvegicus
ENSPCIG00000028591	-	100	71.883	ENSRNOG00000011606	AABR07061825.1	100	70.905	Rattus_norvegicus
ENSPCIG00000028591	-	89	75.482	ENSRBIG00000041608	-	98	73.003	Rhinopithecus_bieti
ENSPCIG00000028591	-	94	69.211	ENSRBIG00000041232	-	98	69.211	Rhinopithecus_bieti
ENSPCIG00000028591	-	100	60.197	ENSRBIG00000029918	-	100	57.985	Rhinopithecus_bieti
ENSPCIG00000028591	-	100	68.856	ENSRBIG00000041972	SSB	88	83.478	Rhinopithecus_bieti
ENSPCIG00000028591	-	100	68.550	ENSRROG00000007149	-	100	66.339	Rhinopithecus_roxellana
ENSPCIG00000028591	-	100	82.759	ENSRROG00000040346	SSB	100	80.296	Rhinopithecus_roxellana
ENSPCIG00000028591	-	97	75.188	ENSRROG00000034102	-	97	72.544	Rhinopithecus_roxellana
ENSPCIG00000028591	-	98	69.773	ENSRROG00000031684	-	100	69.773	Rhinopithecus_roxellana
ENSPCIG00000028591	-	100	83.251	ENSSBOG00000027204	SSB	100	83.005	Saimiri_boliviensis_boliviensis
ENSPCIG00000028591	-	100	97.537	ENSSHAG00000018062	SSB	100	97.537	Sarcophilus_harrisii
ENSPCIG00000028591	-	99	63.081	ENSSFOG00015000550	ssb	100	63.081	Scleropages_formosus
ENSPCIG00000028591	-	98	55.000	ENSSMAG00000013885	ssb	99	58.289	Scophthalmus_maximus
ENSPCIG00000028591	-	99	58.128	ENSSDUG00000020117	ssb	99	57.538	Seriola_dumerili
ENSPCIG00000028591	-	99	55.693	ENSSLDG00000002525	ssb	99	55.556	Seriola_lalandi_dorsalis
ENSPCIG00000028591	-	95	76.042	ENSSARG00000007747	SSB	100	75.521	Sorex_araneus
ENSPCIG00000028591	-	100	78.676	ENSSPUG00000012112	SSB	100	77.451	Sphenodon_punctatus
ENSPCIG00000028591	-	99	55.665	ENSSPAG00000005696	ssb	99	56.667	Stegastes_partitus
ENSPCIG00000028591	-	98	70.603	ENSSSCG00000015938	SSB	95	71.354	Sus_scrofa
ENSPCIG00000028591	-	100	73.659	ENSTGUG00000007942	SSB	100	73.171	Taeniopygia_guttata
ENSPCIG00000028591	-	99	57.037	ENSTRUG00000017839	ssb	99	56.962	Takifugu_rubripes
ENSPCIG00000028591	-	91	58.266	ENSTNIG00000000915	ssb	100	56.915	Tetraodon_nigroviridis
ENSPCIG00000028591	-	83	83.478	ENSTBEG00000009056	SSB	82	83.478	Tupaia_belangeri
ENSPCIG00000028591	-	100	82.801	ENSTTRG00000002152	SSB	100	82.310	Tursiops_truncatus
ENSPCIG00000028591	-	94	84.656	ENSUAMG00000027833	SSB	99	84.392	Ursus_americanus
ENSPCIG00000028591	-	100	83.784	ENSUMAG00000013907	SSB	100	83.292	Ursus_maritimus
ENSPCIG00000028591	-	100	83.498	ENSVPAG00000007183	SSB	100	83.251	Vicugna_pacos
ENSPCIG00000028591	-	100	83.292	ENSVVUG00000016573	SSB	78	82.555	Vulpes_vulpes
ENSPCIG00000028591	-	99	61.713	ENSXETG00000025402	ssb	92	61.713	Xenopus_tropicalis
ENSPCIG00000028591	-	94	56.053	ENSXCOG00000019109	ssb	98	56.267	Xiphophorus_couchianus
ENSPCIG00000028591	-	99	55.911	ENSXMAG00000004888	ssb	100	55.911	Xiphophorus_maculatus