EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000028612 (Gene tree)
Gene ID: 110223147
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 456028 bases
Position: chrFUWB01000152.1:1354132-1810159
Accession: 110223147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038928	Arb2	PF09757.9	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000047939	FAM172A-204	1050	-	ENSPCIP00000038931	343 (aa)	-	-
ENSPCIT00000047938	FAM172A-203	1077	-	ENSPCIP00000038930	352 (aa)	XP_020864207	UPI000A285701
ENSPCIT00000047937	FAM172A-202	1152	-	ENSPCIP00000038929	377 (aa)	-	-
ENSPCIT00000047936	FAM172A-201	1269	-	ENSPCIP00000038928	416 (aa)	XP_020864172	UPI000A2834D3
ENSPCIT00000047943	FAM172A-206	632	-	ENSPCIP00000038935	114 (aa)	-	-
ENSPCIT00000047941	FAM172A-205	1011	-	ENSPCIP00000038933	330 (aa)	XP_020864214	UPI000A2800F2

Gene Model

Click here to download ENSPCIG00000028612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028612	FAM172A	97	90.594	ENSG00000113391	FAM172A	100	93.671	Homo_sapiens
ENSPCIG00000028612	FAM172A	100	86.298	ENSAPLG00000004055	FAM172A	100	86.298	Anas_platyrhynchos
ENSPCIG00000028612	FAM172A	54	39.823	ENSAPLG00000011555	-	93	39.823	Anas_platyrhynchos
ENSPCIG00000028612	FAM172A	91	87.302	ENSACAG00000013305	FAM172A	98	87.302	Anolis_carolinensis
ENSPCIG00000028612	FAM172A	86	85.475	ENSANAG00000035869	FAM172A	83	95.455	Aotus_nancymaae
ENSPCIG00000028612	FAM172A	97	90.842	ENSBTAG00000050195	FAM172A	100	89.904	Bos_taurus
ENSPCIG00000028612	FAM172A	97	91.089	ENSCJAG00000010444	FAM172A	100	90.144	Callithrix_jacchus
ENSPCIG00000028612	FAM172A	86	91.899	ENSCAFG00000008064	FAM172A	99	90.811	Canis_familiaris
ENSPCIG00000028612	FAM172A	97	89.851	ENSCAFG00020006210	FAM172A	100	88.942	Canis_lupus_dingo
ENSPCIG00000028612	FAM172A	97	90.594	ENSCHIG00000008440	FAM172A	100	89.663	Capra_hircus
ENSPCIG00000028612	FAM172A	64	90.977	ENSTSYG00000006286	FAM172A	85	90.977	Carlito_syrichta
ENSPCIG00000028612	FAM172A	60	82.301	ENSCAPG00000014103	-	100	82.301	Cavia_aperea
ENSPCIG00000028612	FAM172A	97	90.594	ENSCCAG00000023116	FAM172A	100	90.270	Cebus_capucinus
ENSPCIG00000028612	FAM172A	89	88.378	ENSCLAG00000005472	FAM172A	93	93.671	Chinchilla_lanigera
ENSPCIG00000028612	FAM172A	86	43.956	ENSCPBG00000004402	-	94	43.956	Chrysemys_picta_bellii
ENSPCIG00000028612	FAM172A	65	90.000	ENSCANG00000040412	FAM172A	92	90.000	Colobus_angolensis_palliatus
ENSPCIG00000028612	FAM172A	97	90.594	ENSDNOG00000004689	FAM172A	100	89.663	Dasypus_novemcinctus
ENSPCIG00000028612	FAM172A	65	90.370	ENSDORG00000013558	Fam172a	88	90.370	Dipodomys_ordii
ENSPCIG00000028612	FAM172A	79	41.212	ENSEBUG00000016097	-	62	41.212	Eptatretus_burgeri
ENSPCIG00000028612	FAM172A	97	89.356	ENSECAG00000018274	FAM172A	100	88.462	Equus_caballus
ENSPCIG00000028612	FAM172A	96	79.000	ENSEEUG00000002887	FAM172A	100	78.125	Erinaceus_europaeus
ENSPCIG00000028612	FAM172A	97	67.726	ENSELUG00000017647	fam172a	96	67.726	Esox_lucius
ENSPCIG00000028612	FAM172A	97	90.842	ENSFCAG00000025443	FAM172A	100	89.904	Felis_catus
ENSPCIG00000028612	FAM172A	89	86.992	ENSFALG00000009072	FAM172A	99	86.992	Ficedula_albicollis
ENSPCIG00000028612	FAM172A	85	41.292	ENSFALG00000006501	-	99	41.292	Ficedula_albicollis
ENSPCIG00000028612	FAM172A	100	86.779	ENSGALG00000014661	FAM172A	100	86.779	Gallus_gallus
ENSPCIG00000028612	FAM172A	100	91.106	ENSGAGG00000003839	FAM172A	100	91.106	Gopherus_agassizii
ENSPCIG00000028612	FAM172A	83	44.669	ENSGAGG00000022828	-	91	44.669	Gopherus_agassizii
ENSPCIG00000028612	FAM172A	97	90.347	ENSGGOG00000010296	FAM172A	100	89.423	Gorilla_gorilla
ENSPCIG00000028612	FAM172A	97	87.624	ENSHGLG00000011178	FAM172A	100	94.937	Heterocephalus_glaber_female
ENSPCIG00000028612	FAM172A	86	90.196	ENSHGLG00100013340	FAM172A	100	94.937	Heterocephalus_glaber_male
ENSPCIG00000028612	FAM172A	97	90.099	ENSSTOG00000009918	FAM172A	100	89.183	Ictidomys_tridecemlineatus
ENSPCIG00000028612	FAM172A	83	48.127	ENSLACG00000001532	si:ch73-41e3.7	92	48.127	Latimeria_chalumnae
ENSPCIG00000028612	FAM172A	98	75.795	ENSLOCG00000001629	fam172a	98	75.669	Lepisosteus_oculatus
ENSPCIG00000028612	FAM172A	65	90.000	ENSMFAG00000001171	FAM172A	92	90.000	Macaca_fascicularis
ENSPCIG00000028612	FAM172A	92	90.814	ENSMNEG00000039938	FAM172A	92	90.000	Macaca_nemestrina
ENSPCIG00000028612	FAM172A	100	90.144	ENSMICG00000030403	FAM172A	100	90.144	Microcebus_murinus
ENSPCIG00000028612	FAM172A	89	88.108	ENSMOCG00000003613	Fam172a	100	88.108	Microtus_ochrogaster
ENSPCIG00000028612	FAM172A	100	98.317	ENSMODG00000020131	FAM172A	100	98.317	Monodelphis_domestica
ENSPCIG00000028612	FAM172A	75	91.139	MGP_PahariEiJ_G0015818	Fam172a	100	91.139	Mus_pahari
ENSPCIG00000028612	FAM172A	89	90.000	ENSNGAG00000019570	Fam172a	100	90.000	Nannospalax_galili
ENSPCIG00000028612	FAM172A	65	90.000	ENSNLEG00000013903	FAM172A	89	90.000	Nomascus_leucogenys
ENSPCIG00000028612	FAM172A	89	90.270	ENSOANG00000011068	FAM172A	99	90.270	Ornithorhynchus_anatinus
ENSPCIG00000028612	FAM172A	94	90.585	ENSOCUG00000007299	FAM172A	96	89.630	Oryctolagus_cuniculus
ENSPCIG00000028612	FAM172A	97	89.604	ENSOGAG00000015189	FAM172A	100	88.702	Otolemur_garnettii
ENSPCIG00000028612	FAM172A	89	88.410	ENSOARG00000016711	FAM172A	87	87.467	Ovis_aries
ENSPCIG00000028612	FAM172A	65	89.630	ENSPPAG00000030542	FAM172A	92	89.630	Pan_paniscus
ENSPCIG00000028612	FAM172A	97	90.842	ENSPPRG00000006653	FAM172A	100	89.904	Panthera_pardus
ENSPCIG00000028612	FAM172A	97	90.842	ENSPTIG00000012681	FAM172A	100	89.904	Panthera_tigris_altaica
ENSPCIG00000028612	FAM172A	65	89.630	ENSPTRG00000017074	FAM172A	92	89.630	Pan_troglodytes
ENSPCIG00000028612	FAM172A	65	90.000	ENSPANG00000011687	FAM172A	92	90.000	Papio_anubis
ENSPCIG00000028612	FAM172A	97	71.675	ENSPKIG00000012314	fam172a	100	75.728	Paramormyrops_kingsleyae
ENSPCIG00000028612	FAM172A	100	88.221	ENSPEMG00000009604	-	100	93.671	Peromyscus_maniculatus_bairdii
ENSPCIG00000028612	FAM172A	55	89.520	ENSPCOG00000024072	FAM172A	93	89.520	Propithecus_coquereli
ENSPCIG00000028612	FAM172A	65	87.732	ENSRNOG00000013844	Fam172a	99	87.732	Rattus_norvegicus
ENSPCIG00000028612	FAM172A	53	73.182	ENSRBIG00000028680	-	93	73.182	Rhinopithecus_bieti
ENSPCIG00000028612	FAM172A	65	90.000	ENSRROG00000023807	FAM172A	92	90.000	Rhinopithecus_roxellana
ENSPCIG00000028612	FAM172A	97	91.089	ENSSBOG00000019860	FAM172A	100	90.144	Saimiri_boliviensis_boliviensis
ENSPCIG00000028612	FAM172A	100	97.596	ENSSHAG00000013743	FAM172A	100	97.596	Sarcophilus_harrisii
ENSPCIG00000028612	FAM172A	100	87.019	ENSSPUG00000008161	FAM172A	100	87.019	Sphenodon_punctatus
ENSPCIG00000028612	FAM172A	100	90.144	ENSSSCG00000027608	FAM172A	100	91.081	Sus_scrofa
ENSPCIG00000028612	FAM172A	91	86.842	ENSTGUG00000000715	FAM172A	100	86.842	Taeniopygia_guttata
ENSPCIG00000028612	FAM172A	80	45.238	ENSTGUG00000013623	-	100	45.238	Taeniopygia_guttata
ENSPCIG00000028612	FAM172A	79	56.886	ENSTNIG00000009902	fam172a	100	58.929	Tetraodon_nigroviridis
ENSPCIG00000028612	FAM172A	100	86.538	ENSTTRG00000001521	FAM172A	100	86.538	Tursiops_truncatus
ENSPCIG00000028612	FAM172A	97	91.337	ENSUMAG00000005442	FAM172A	100	90.385	Ursus_maritimus
ENSPCIG00000028612	FAM172A	97	89.851	ENSVVUG00000022112	FAM172A	100	88.942	Vulpes_vulpes
ENSPCIG00000028612	FAM172A	91	43.734	ENSXETG00000033027	-	99	43.734	Xenopus_tropicalis
ENSPCIG00000028612	FAM172A	100	80.144	ENSXETG00000011592	fam172a	99	80.144	Xenopus_tropicalis