EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000028851 (Gene tree)
Gene ID: 110194292
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 30115 bases
Position: chrFUWB01002228.1:289972-320086
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000039309	RNA_pol_Rpb1_5	PF04998.17	8.9e-101	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_4	PF05000.17	5.9e-38	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_2	PF00623.20	1.7e-74	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_3	PF04983.18	1.8e-49	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_1	PF04997.12	2.2e-108	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_7	PF04990.12	3.2e-54	1	1
ENSPCIP00000039309	RNA_pol_Rpb1_6	PF04992.14	6.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000048418	-	6308	-	ENSPCIP00000039309	1961 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000028851	-	51	33.333	ENSPCIG00000004222	POLR1A	63	33.333
ENSPCIG00000028851	-	67	38.546	ENSPCIG00000015842	POLR3A	91	38.546

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028851	-	82	94.169	ENSAPOG00000006552	polr2a	99	94.169	Acanthochromis_polyacanthus
ENSPCIG00000028851	-	96	87.173	ENSAMEG00000016265	-	96	87.173	Ailuropoda_melanoleuca
ENSPCIG00000028851	-	82	91.501	ENSACIG00000015982	polr2a	82	92.122	Amphilophus_citrinellus
ENSPCIG00000028851	-	82	94.293	ENSAOCG00000004255	polr2a	99	94.293	Amphiprion_ocellaris
ENSPCIG00000028851	-	82	94.293	ENSAPEG00000012623	polr2a	86	94.293	Amphiprion_percula
ENSPCIG00000028851	-	82	94.107	ENSATEG00000019644	polr2a	86	94.107	Anabas_testudineus
ENSPCIG00000028851	-	96	86.156	ENSACAG00000014561	POLR2A	96	86.156	Anolis_carolinensis
ENSPCIG00000028851	-	96	87.310	ENSANAG00000020093	-	96	87.310	Aotus_nancymaae
ENSPCIG00000028851	-	82	93.921	ENSACLG00000006735	polr2a	86	93.921	Astatotilapia_calliptera
ENSPCIG00000028851	-	82	94.541	ENSAMXG00000020046	polr2a	86	94.541	Astyanax_mexicanus
ENSPCIG00000028851	-	96	87.310	ENSBTAG00000046765	POLR2A	96	87.310	Bos_taurus
ENSPCIG00000028851	-	81	69.522	WBGene00000123	ama-1	87	69.444	Caenorhabditis_elegans
ENSPCIG00000028851	-	96	87.585	ENSCAFG00000016532	POLR2A	94	99.442	Canis_familiaris
ENSPCIG00000028851	-	96	86.426	ENSCAFG00020007929	-	96	86.426	Canis_lupus_dingo
ENSPCIG00000028851	-	96	87.310	ENSCHIG00000027173	-	96	87.310	Capra_hircus
ENSPCIG00000028851	-	96	84.793	ENSTSYG00000012803	-	96	85.317	Carlito_syrichta
ENSPCIG00000028851	-	81	98.355	ENSCAPG00000001882	-	88	98.355	Cavia_aperea
ENSPCIG00000028851	-	82	98.263	ENSCPOG00000014812	-	88	98.263	Cavia_porcellus
ENSPCIG00000028851	-	96	87.310	ENSCCAG00000020938	-	96	87.310	Cebus_capucinus
ENSPCIG00000028851	-	96	87.310	ENSCATG00000013680	-	96	87.310	Cercocebus_atys
ENSPCIG00000028851	-	96	87.153	ENSCLAG00000012196	-	96	87.153	Chinchilla_lanigera
ENSPCIG00000028851	-	82	90.253	ENSCSAG00000011644	-	86	90.259	Chlorocebus_sabaeus
ENSPCIG00000028851	-	82	94.913	ENSCPBG00000012697	POLR2A	94	94.638	Chrysemys_picta_bellii
ENSPCIG00000028851	-	81	77.421	ENSCING00000007884	-	96	76.594	Ciona_intestinalis
ENSPCIG00000028851	-	82	76.022	ENSCSAVG00000008334	-	94	73.840	Ciona_savignyi
ENSPCIG00000028851	-	96	86.628	ENSCANG00000010622	-	86	97.727	Colobus_angolensis_palliatus
ENSPCIG00000028851	-	82	92.870	ENSCGRG00001003538	Polr2a	85	91.098	Cricetulus_griseus_chok1gshd
ENSPCIG00000028851	-	82	95.583	ENSCGRG00000012105	Polr2a	85	95.524	Cricetulus_griseus_crigri
ENSPCIG00000028851	-	82	93.672	ENSCSEG00000002635	polr2a	86	93.672	Cynoglossus_semilaevis
ENSPCIG00000028851	-	82	94.417	ENSCVAG00000005156	polr2a	86	94.417	Cyprinodon_variegatus
ENSPCIG00000028851	-	96	84.321	ENSDNOG00000016482	-	96	84.321	Dasypus_novemcinctus
ENSPCIG00000028851	-	96	87.310	ENSDORG00000008667	Polr2a	96	87.310	Dipodomys_ordii
ENSPCIG00000028851	-	82	73.951	FBgn0003277	RpII215	84	74.782	Drosophila_melanogaster
ENSPCIG00000028851	-	76	95.798	ENSETEG00000002540	-	79	95.801	Echinops_telfairi
ENSPCIG00000028851	-	82	87.960	ENSEBUG00000013967	polr2a	82	87.376	Eptatretus_burgeri
ENSPCIG00000028851	-	96	85.579	ENSEASG00005019114	-	98	85.579	Equus_asinus_asinus
ENSPCIG00000028851	-	96	87.257	ENSECAG00000018485	POLR2A	96	87.257	Equus_caballus
ENSPCIG00000028851	-	76	99.266	ENSEEUG00000001154	-	92	99.266	Erinaceus_europaeus
ENSPCIG00000028851	-	82	90.136	ENSELUG00000014284	polr2a	84	90.691	Esox_lucius
ENSPCIG00000028851	-	96	87.257	ENSFDAG00000008287	-	96	87.257	Fukomys_damarensis
ENSPCIG00000028851	-	82	94.417	ENSFHEG00000001768	polr2a	88	94.417	Fundulus_heteroclitus
ENSPCIG00000028851	-	82	90.248	ENSGMOG00000007725	polr2a	99	90.248	Gadus_morhua
ENSPCIG00000028851	-	82	94.355	ENSGAFG00000005389	polr2a	93	94.355	Gambusia_affinis
ENSPCIG00000028851	-	82	89.879	ENSGACG00000019366	polr2a	99	89.879	Gasterosteus_aculeatus
ENSPCIG00000028851	-	82	97.215	ENSGGOG00000014800	-	96	97.563	Gorilla_gorilla
ENSPCIG00000028851	-	82	93.921	ENSHBUG00000018937	polr2a	89	93.921	Haplochromis_burtoni
ENSPCIG00000028851	-	96	87.257	ENSHGLG00000012381	POLR2A	96	87.257	Heterocephalus_glaber_female
ENSPCIG00000028851	-	96	87.257	ENSHGLG00100014843	POLR2A	96	87.257	Heterocephalus_glaber_male
ENSPCIG00000028851	-	82	93.859	ENSHCOG00000011874	polr2a	86	93.859	Hippocampus_comes
ENSPCIG00000028851	-	82	94.107	ENSIPUG00000002613	Polr2a	86	94.107	Ictalurus_punctatus
ENSPCIG00000028851	-	96	87.310	ENSSTOG00000001304	-	96	87.310	Ictidomys_tridecemlineatus
ENSPCIG00000028851	-	96	87.205	ENSJJAG00000013049	Polr2a	96	87.205	Jaculus_jaculus
ENSPCIG00000028851	-	81	72.772	ENSKMAG00000016343	polr2a	85	85.104	Kryptolebias_marmoratus
ENSPCIG00000028851	-	82	94.045	ENSLBEG00000027652	polr2a	86	94.045	Labrus_bergylta
ENSPCIG00000028851	-	81	87.034	ENSLACG00000012071	POLR2A	81	87.097	Latimeria_chalumnae
ENSPCIG00000028851	-	81	94.714	ENSLOCG00000013863	polr2a	89	94.355	Lepisosteus_oculatus
ENSPCIG00000028851	-	96	87.257	ENSLAFG00000008626	-	89	99.380	Loxodonta_africana
ENSPCIG00000028851	-	50	97.855	ENSMFAG00000007042	-	99	97.855	Macaca_fascicularis
ENSPCIG00000028851	-	97	88.144	ENSMMUG00000023620	-	99	88.144	Macaca_mulatta
ENSPCIG00000028851	-	96	86.726	ENSMNEG00000040407	-	96	86.726	Macaca_nemestrina
ENSPCIG00000028851	-	96	82.214	ENSMLEG00000030263	-	99	97.855	Mandrillus_leucophaeus
ENSPCIG00000028851	-	82	94.107	ENSMAMG00000003351	polr2a	86	94.107	Mastacembelus_armatus
ENSPCIG00000028851	-	82	93.921	ENSMZEG00005021429	polr2a	86	93.921	Maylandia_zebra
ENSPCIG00000028851	-	50	99.286	ENSMAUG00000021055	-	99	99.286	Mesocricetus_auratus
ENSPCIG00000028851	-	96	87.205	ENSMICG00000013372	-	98	98.158	Microcebus_murinus
ENSPCIG00000028851	-	82	94.256	ENSMOCG00000018279	Polr2a	79	94.743	Microtus_ochrogaster
ENSPCIG00000028851	-	82	93.610	ENSMMOG00000012515	polr2a	86	93.610	Mola_mola
ENSPCIG00000028851	-	96	87.782	ENSMODG00000007009	-	96	87.782	Monodelphis_domestica
ENSPCIG00000028851	-	82	94.169	ENSMALG00000008716	polr2a	84	94.169	Monopterus_albus
ENSPCIG00000028851	-	96	87.619	MGP_CAROLIEiJ_G0016587	Polr2a	96	87.619	Mus_caroli
ENSPCIG00000028851	-	96	87.619	ENSMUSG00000005198	Polr2a	96	87.619	Mus_musculus
ENSPCIG00000028851	-	96	85.475	MGP_PahariEiJ_G0017718	Polr2a	96	85.475	Mus_pahari
ENSPCIG00000028851	-	96	87.619	MGP_SPRETEiJ_G0017423	Polr2a	96	87.619	Mus_spretus
ENSPCIG00000028851	-	96	87.257	ENSMPUG00000009648	-	96	87.257	Mustela_putorius_furo
ENSPCIG00000028851	-	82	98.823	ENSMLUG00000009088	-	86	98.823	Myotis_lucifugus
ENSPCIG00000028851	-	96	87.310	ENSNGAG00000002543	Polr2a	96	87.310	Nannospalax_galili
ENSPCIG00000028851	-	82	91.253	ENSNBRG00000002005	polr2a	82	91.811	Neolamprologus_brichardi
ENSPCIG00000028851	-	96	86.081	ENSNLEG00000009460	-	96	86.081	Nomascus_leucogenys
ENSPCIG00000028851	-	75	100.000	ENSMEUG00000008611	-	88	100.000	Notamacropus_eugenii
ENSPCIG00000028851	-	81	99.242	ENSOPRG00000015116	-	99	99.242	Ochotona_princeps
ENSPCIG00000028851	-	76	99.265	ENSODEG00000017674	-	84	94.493	Octodon_degus
ENSPCIG00000028851	-	82	94.107	ENSONIG00000009231	polr2a	86	94.107	Oreochromis_niloticus
ENSPCIG00000028851	-	82	99.318	ENSOCUG00000017929	-	93	99.318	Oryctolagus_cuniculus
ENSPCIG00000028851	-	82	94.045	ENSORLG00000006431	polr2a	86	94.045	Oryzias_latipes
ENSPCIG00000028851	-	82	94.045	ENSORLG00020010235	polr2a	86	94.045	Oryzias_latipes_hni
ENSPCIG00000028851	-	82	94.045	ENSORLG00015007075	polr2a	86	94.045	Oryzias_latipes_hsok
ENSPCIG00000028851	-	82	94.158	ENSOMEG00000010713	polr2a	100	94.158	Oryzias_melastigma
ENSPCIG00000028851	-	82	99.256	ENSOGAG00000033608	-	86	99.256	Otolemur_garnettii
ENSPCIG00000028851	-	97	87.388	ENSOARG00000013874	-	99	87.388	Ovis_aries
ENSPCIG00000028851	-	97	84.557	ENSPPAG00000043734	-	96	84.934	Pan_paniscus
ENSPCIG00000028851	-	96	86.081	ENSPTRG00000008691	POLR2A	96	86.081	Pan_troglodytes
ENSPCIG00000028851	-	96	86.628	ENSPANG00000024099	-	96	86.628	Papio_anubis
ENSPCIG00000028851	-	78	93.018	ENSPKIG00000005727	polr2a	84	84.136	Paramormyrops_kingsleyae
ENSPCIG00000028851	-	82	96.592	ENSPSIG00000014006	POLR2A	98	96.592	Pelodiscus_sinensis
ENSPCIG00000028851	-	82	94.479	ENSPMGG00000019734	polr2a	97	94.479	Periophthalmus_magnuspinnatus
ENSPCIG00000028851	-	96	87.310	ENSPEMG00000012521	Polr2a	96	87.310	Peromyscus_maniculatus_bairdii
ENSPCIG00000028851	-	82	94.355	ENSPFOG00000007890	polr2a	88	94.355	Poecilia_formosa
ENSPCIG00000028851	-	82	94.355	ENSPLAG00000007399	polr2a	88	94.355	Poecilia_latipinna
ENSPCIG00000028851	-	82	94.355	ENSPMEG00000002071	polr2a	88	94.355	Poecilia_mexicana
ENSPCIG00000028851	-	82	94.293	ENSPREG00000013122	polr2a	86	94.293	Poecilia_reticulata
ENSPCIG00000028851	-	96	87.368	ENSPPYG00000007924	-	95	87.368	Pongo_abelii
ENSPCIG00000028851	-	74	99.211	ENSPCAG00000006951	-	78	99.211	Procavia_capensis
ENSPCIG00000028851	-	96	86.160	ENSPCOG00000025260	-	96	86.160	Propithecus_coquereli
ENSPCIG00000028851	-	96	87.048	ENSPVAG00000005069	-	96	87.048	Pteropus_vampyrus
ENSPCIG00000028851	-	82	93.983	ENSPNYG00000022340	polr2a	86	93.983	Pundamilia_nyererei
ENSPCIG00000028851	-	82	94.355	ENSPNAG00000011237	polr2a	86	94.355	Pygocentrus_nattereri
ENSPCIG00000028851	-	96	87.310	ENSRNOG00000028834	Polr2a	96	87.310	Rattus_norvegicus
ENSPCIG00000028851	-	97	87.087	ENSRBIG00000002471	-	99	85.787	Rhinopithecus_bieti
ENSPCIG00000028851	-	96	87.349	ENSRROG00000029583	-	99	85.388	Rhinopithecus_roxellana
ENSPCIG00000028851	-	81	50.403	YDL140C	RPO21	92	49.668	Saccharomyces_cerevisiae
ENSPCIG00000028851	-	96	87.310	ENSSBOG00000000808	-	96	87.310	Saimiri_boliviensis_boliviensis
ENSPCIG00000028851	-	82	100.000	ENSSHAG00000002858	-	88	100.000	Sarcophilus_harrisii
ENSPCIG00000028851	-	82	94.417	ENSSFOG00015023275	polr2a	86	94.417	Scleropages_formosus
ENSPCIG00000028851	-	82	93.859	ENSSMAG00000009137	polr2a	86	93.859	Scophthalmus_maximus
ENSPCIG00000028851	-	82	94.293	ENSSDUG00000020466	polr2a	86	94.293	Seriola_dumerili
ENSPCIG00000028851	-	82	94.293	ENSSLDG00000020613	polr2a	86	94.293	Seriola_lalandi_dorsalis
ENSPCIG00000028851	-	82	95.474	ENSSARG00000005875	-	96	95.474	Sorex_araneus
ENSPCIG00000028851	-	82	94.293	ENSSPAG00000016741	polr2a	86	94.293	Stegastes_partitus
ENSPCIG00000028851	-	96	86.523	ENSSSCG00000028278	-	96	86.523	Sus_scrofa
ENSPCIG00000028851	-	82	73.110	ENSTRUG00000012320	polr2a	80	73.443	Takifugu_rubripes
ENSPCIG00000028851	-	82	92.680	ENSTNIG00000010136	polr2a	97	92.680	Tetraodon_nigroviridis
ENSPCIG00000028851	-	54	99.441	ENSTBEG00000013294	-	53	99.441	Tupaia_belangeri
ENSPCIG00000028851	-	96	85.737	ENSTTRG00000014273	-	96	85.737	Tursiops_truncatus
ENSPCIG00000028851	-	92	90.719	ENSUAMG00000014866	-	98	90.719	Ursus_americanus
ENSPCIG00000028851	-	89	99.441	ENSUMAG00000015732	-	95	99.441	Ursus_maritimus
ENSPCIG00000028851	-	96	87.342	ENSVVUG00000027878	-	96	87.342	Vulpes_vulpes
ENSPCIG00000028851	-	95	85.144	ENSXETG00000012465	polr2a	96	85.144	Xenopus_tropicalis
ENSPCIG00000028851	-	82	91.501	ENSXCOG00000001804	polr2a	88	92.122	Xiphophorus_couchianus
ENSPCIG00000028851	-	82	94.355	ENSXMAG00000015687	polr2a	86	94.355	Xiphophorus_maculatus