EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000029047 (Gene tree)
Gene ID: 110216539
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 37479 bases
Position: chrFUWB01002234.1:118312-155790
Accession: 110216539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000039593	MRP-S27	PF10037.9	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000048776	PTCD2-201	1152	-	ENSPCIP00000039593	383 (aa)	XP_020854034	UPI000A289CEF

Gene Model

Click here to download ENSPCIG00000029047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000029047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000029047	PTCD2	100	60.156	ENSG00000049883	PTCD2	99	60.156	Homo_sapiens
ENSPCIG00000029047	PTCD2	92	48.315	ENSAPOG00000020682	ptcd2	93	48.315	Acanthochromis_polyacanthus
ENSPCIG00000029047	PTCD2	100	59.375	ENSAMEG00000007194	PTCD2	99	59.375	Ailuropoda_melanoleuca
ENSPCIG00000029047	PTCD2	90	42.693	ENSACIG00000002053	ptcd2	100	42.693	Amphilophus_citrinellus
ENSPCIG00000029047	PTCD2	92	48.034	ENSAOCG00000006616	ptcd2	91	48.034	Amphiprion_ocellaris
ENSPCIG00000029047	PTCD2	92	48.034	ENSAPEG00000022926	ptcd2	91	48.034	Amphiprion_percula
ENSPCIG00000029047	PTCD2	94	58.726	ENSACAG00000009747	PTCD2	92	58.726	Anolis_carolinensis
ENSPCIG00000029047	PTCD2	100	59.375	ENSANAG00000029353	PTCD2	99	59.375	Aotus_nancymaae
ENSPCIG00000029047	PTCD2	93	45.961	ENSACLG00000027742	ptcd2	91	45.961	Astatotilapia_calliptera
ENSPCIG00000029047	PTCD2	89	43.860	ENSAMXG00000029404	ptcd2	91	43.860	Astyanax_mexicanus
ENSPCIG00000029047	PTCD2	100	59.635	ENSBTAG00000014675	PTCD2	100	59.635	Bos_taurus
ENSPCIG00000029047	PTCD2	100	59.635	ENSCJAG00000016364	PTCD2	99	59.635	Callithrix_jacchus
ENSPCIG00000029047	PTCD2	100	60.156	ENSCAFG00000007982	PTCD2	90	60.156	Canis_familiaris
ENSPCIG00000029047	PTCD2	90	62.717	ENSCAFG00020019147	PTCD2	97	62.717	Canis_lupus_dingo
ENSPCIG00000029047	PTCD2	100	59.375	ENSCHIG00000017118	PTCD2	100	59.375	Capra_hircus
ENSPCIG00000029047	PTCD2	93	58.101	ENSCPOG00000040168	PTCD2	93	58.101	Cavia_porcellus
ENSPCIG00000029047	PTCD2	100	59.115	ENSCCAG00000029389	-	99	59.115	Cebus_capucinus
ENSPCIG00000029047	PTCD2	76	59.044	ENSCCAG00000021996	-	90	59.386	Cebus_capucinus
ENSPCIG00000029047	PTCD2	100	59.635	ENSCATG00000019069	PTCD2	100	59.635	Cercocebus_atys
ENSPCIG00000029047	PTCD2	100	57.292	ENSCLAG00000000072	PTCD2	100	57.292	Chinchilla_lanigera
ENSPCIG00000029047	PTCD2	100	60.156	ENSCSAG00000015623	PTCD2	100	60.677	Chlorocebus_sabaeus
ENSPCIG00000029047	PTCD2	74	64.118	ENSCHOG00000010634	PTCD2	82	64.118	Choloepus_hoffmanni
ENSPCIG00000029047	PTCD2	99	53.525	ENSCPBG00000000216	PTCD2	98	53.525	Chrysemys_picta_bellii
ENSPCIG00000029047	PTCD2	100	59.635	ENSCANG00000035636	PTCD2	99	59.635	Colobus_angolensis_palliatus
ENSPCIG00000029047	PTCD2	93	58.939	ENSCGRG00001015289	Ptcd2	79	58.939	Cricetulus_griseus_chok1gshd
ENSPCIG00000029047	PTCD2	93	58.939	ENSCGRG00000006193	Ptcd2	79	58.939	Cricetulus_griseus_crigri
ENSPCIG00000029047	PTCD2	92	49.157	ENSCVAG00000001285	ptcd2	91	49.157	Cyprinodon_variegatus
ENSPCIG00000029047	PTCD2	98	45.238	ENSDARG00000035391	ptcd2	98	45.238	Danio_rerio
ENSPCIG00000029047	PTCD2	100	60.417	ENSDNOG00000008719	PTCD2	100	60.417	Dasypus_novemcinctus
ENSPCIG00000029047	PTCD2	100	60.724	ENSDORG00000004921	Ptcd2	100	60.724	Dipodomys_ordii
ENSPCIG00000029047	PTCD2	100	54.663	ENSETEG00000016542	PTCD2	99	54.404	Echinops_telfairi
ENSPCIG00000029047	PTCD2	92	61.017	ENSEASG00005018038	PTCD2	93	61.017	Equus_asinus_asinus
ENSPCIG00000029047	PTCD2	100	58.854	ENSECAG00000007022	PTCD2	98	58.854	Equus_caballus
ENSPCIG00000029047	PTCD2	100	57.292	ENSEEUG00000014031	PTCD2	99	57.292	Erinaceus_europaeus
ENSPCIG00000029047	PTCD2	92	48.442	ENSELUG00000003584	ptcd2	91	48.442	Esox_lucius
ENSPCIG00000029047	PTCD2	100	54.688	ENSFCAG00000045432	PTCD2	82	54.688	Felis_catus
ENSPCIG00000029047	PTCD2	85	50.305	ENSFALG00000010299	PTCD2	100	50.305	Ficedula_albicollis
ENSPCIG00000029047	PTCD2	93	61.173	ENSFDAG00000018461	PTCD2	93	61.173	Fukomys_damarensis
ENSPCIG00000029047	PTCD2	91	49.716	ENSGMOG00000003637	ptcd2	91	49.716	Gadus_morhua
ENSPCIG00000029047	PTCD2	93	50.140	ENSGALG00000038260	PTCD2	100	49.610	Gallus_gallus
ENSPCIG00000029047	PTCD2	99	57.702	ENSGAGG00000021952	PTCD2	98	57.702	Gopherus_agassizii
ENSPCIG00000029047	PTCD2	100	60.156	ENSGGOG00000010695	PTCD2	99	60.156	Gorilla_gorilla
ENSPCIG00000029047	PTCD2	93	45.682	ENSHBUG00000009191	ptcd2	91	45.682	Haplochromis_burtoni
ENSPCIG00000029047	PTCD2	93	59.218	ENSHGLG00000001234	PTCD2	93	59.218	Heterocephalus_glaber_female
ENSPCIG00000029047	PTCD2	93	59.218	ENSHGLG00100015419	PTCD2	93	59.218	Heterocephalus_glaber_male
ENSPCIG00000029047	PTCD2	92	47.339	ENSHCOG00000001703	ptcd2	92	47.339	Hippocampus_comes
ENSPCIG00000029047	PTCD2	92	43.944	ENSIPUG00000006080	ptcd2	97	44.355	Ictalurus_punctatus
ENSPCIG00000029047	PTCD2	100	58.418	ENSSTOG00000006596	PTCD2	100	58.418	Ictidomys_tridecemlineatus
ENSPCIG00000029047	PTCD2	100	57.812	ENSJJAG00000024388	Ptcd2	100	57.812	Jaculus_jaculus
ENSPCIG00000029047	PTCD2	90	46.264	ENSKMAG00000009329	ptcd2	91	46.264	Kryptolebias_marmoratus
ENSPCIG00000029047	PTCD2	92	44.652	ENSLBEG00000024871	ptcd2	96	44.652	Labrus_bergylta
ENSPCIG00000029047	PTCD2	98	52.381	ENSLOCG00000011122	ptcd2	97	52.381	Lepisosteus_oculatus
ENSPCIG00000029047	PTCD2	81	62.821	ENSLAFG00000004115	PTCD2	100	62.821	Loxodonta_africana
ENSPCIG00000029047	PTCD2	100	59.375	ENSMFAG00000031516	PTCD2	99	59.375	Macaca_fascicularis
ENSPCIG00000029047	PTCD2	100	59.635	ENSMNEG00000007537	PTCD2	100	59.635	Macaca_nemestrina
ENSPCIG00000029047	PTCD2	100	59.896	ENSMLEG00000031093	PTCD2	99	59.896	Mandrillus_leucophaeus
ENSPCIG00000029047	PTCD2	98	47.733	ENSMAMG00000018529	ptcd2	97	47.733	Mastacembelus_armatus
ENSPCIG00000029047	PTCD2	93	45.961	ENSMZEG00005003625	ptcd2	91	45.961	Maylandia_zebra
ENSPCIG00000029047	PTCD2	91	51.149	ENSMGAG00000005033	PTCD2	100	51.149	Meleagris_gallopavo
ENSPCIG00000029047	PTCD2	100	61.719	ENSMICG00000004535	PTCD2	99	61.719	Microcebus_murinus
ENSPCIG00000029047	PTCD2	100	55.990	ENSMOCG00000019985	Ptcd2	100	55.990	Microtus_ochrogaster
ENSPCIG00000029047	PTCD2	100	78.125	ENSMODG00000001695	PTCD2	100	78.125	Monodelphis_domestica
ENSPCIG00000029047	PTCD2	92	49.014	ENSMALG00000022372	ptcd2	93	49.014	Monopterus_albus
ENSPCIG00000029047	PTCD2	100	56.250	MGP_CAROLIEiJ_G0018829	Ptcd2	100	56.250	Mus_caroli
ENSPCIG00000029047	PTCD2	100	56.250	ENSMUSG00000021650	Ptcd2	100	56.250	Mus_musculus
ENSPCIG00000029047	PTCD2	100	56.250	MGP_PahariEiJ_G0015904	Ptcd2	100	56.250	Mus_pahari
ENSPCIG00000029047	PTCD2	100	56.250	MGP_SPRETEiJ_G0019711	Ptcd2	100	56.250	Mus_spretus
ENSPCIG00000029047	PTCD2	100	59.896	ENSMPUG00000014401	PTCD2	100	59.896	Mustela_putorius_furo
ENSPCIG00000029047	PTCD2	92	61.364	ENSMLUG00000007374	PTCD2	92	60.615	Myotis_lucifugus
ENSPCIG00000029047	PTCD2	93	58.939	ENSNGAG00000005027	Ptcd2	93	58.939	Nannospalax_galili
ENSPCIG00000029047	PTCD2	93	46.240	ENSNBRG00000008174	ptcd2	93	46.240	Neolamprologus_brichardi
ENSPCIG00000029047	PTCD2	86	45.152	ENSNBRG00000000092	-	100	45.152	Neolamprologus_brichardi
ENSPCIG00000029047	PTCD2	100	60.677	ENSNLEG00000004516	PTCD2	99	60.677	Nomascus_leucogenys
ENSPCIG00000029047	PTCD2	100	60.207	ENSMEUG00000014012	-	99	60.207	Notamacropus_eugenii
ENSPCIG00000029047	PTCD2	100	54.688	ENSOPRG00000007290	PTCD2	99	54.688	Ochotona_princeps
ENSPCIG00000029047	PTCD2	94	59.444	ENSODEG00000016417	PTCD2	94	59.444	Octodon_degus
ENSPCIG00000029047	PTCD2	78	47.492	ENSONIG00000011269	ptcd2	87	47.492	Oreochromis_niloticus
ENSPCIG00000029047	PTCD2	93	58.939	ENSOCUG00000007970	PTCD2	100	57.031	Oryctolagus_cuniculus
ENSPCIG00000029047	PTCD2	100	45.619	ENSORLG00000003851	ptcd2	98	45.876	Oryzias_latipes
ENSPCIG00000029047	PTCD2	100	45.103	ENSORLG00020009823	ptcd2	100	45.361	Oryzias_latipes_hni
ENSPCIG00000029047	PTCD2	90	47.143	ENSORLG00015016777	ptcd2	99	47.429	Oryzias_latipes_hsok
ENSPCIG00000029047	PTCD2	100	45.876	ENSOMEG00000012396	ptcd2	93	45.876	Oryzias_melastigma
ENSPCIG00000029047	PTCD2	93	60.335	ENSOGAG00000008390	PTCD2	92	60.335	Otolemur_garnettii
ENSPCIG00000029047	PTCD2	100	59.115	ENSOARG00000005087	PTCD2	99	59.115	Ovis_aries
ENSPCIG00000029047	PTCD2	100	60.156	ENSPPAG00000028480	PTCD2	99	60.156	Pan_paniscus
ENSPCIG00000029047	PTCD2	100	59.896	ENSPTRG00000016968	PTCD2	99	59.126	Pan_troglodytes
ENSPCIG00000029047	PTCD2	90	62.319	ENSPANG00000006611	PTCD2	89	62.319	Papio_anubis
ENSPCIG00000029047	PTCD2	92	48.169	ENSPKIG00000019896	ptcd2	92	48.169	Paramormyrops_kingsleyae
ENSPCIG00000029047	PTCD2	82	60.759	ENSPSIG00000014559	PTCD2	98	60.759	Pelodiscus_sinensis
ENSPCIG00000029047	PTCD2	100	56.995	ENSPEMG00000000884	Ptcd2	100	56.995	Peromyscus_maniculatus_bairdii
ENSPCIG00000029047	PTCD2	92	48.169	ENSPLAG00000010456	ptcd2	92	48.169	Poecilia_latipinna
ENSPCIG00000029047	PTCD2	92	48.169	ENSPREG00000021797	ptcd2	90	48.169	Poecilia_reticulata
ENSPCIG00000029047	PTCD2	100	53.906	ENSPPYG00000015543	PTCD2	99	53.906	Pongo_abelii
ENSPCIG00000029047	PTCD2	74	55.282	ENSPCAG00000006806	PTCD2	90	55.282	Procavia_capensis
ENSPCIG00000029047	PTCD2	100	56.771	ENSPVAG00000010935	PTCD2	99	56.771	Pteropus_vampyrus
ENSPCIG00000029047	PTCD2	93	45.961	ENSPNYG00000003122	ptcd2	91	45.961	Pundamilia_nyererei
ENSPCIG00000029047	PTCD2	92	48.739	ENSPNAG00000021490	ptcd2	93	49.441	Pygocentrus_nattereri
ENSPCIG00000029047	PTCD2	93	58.659	ENSRNOG00000028403	Ptcd2	94	58.659	Rattus_norvegicus
ENSPCIG00000029047	PTCD2	100	55.729	ENSRBIG00000032929	PTCD2	99	55.729	Rhinopithecus_bieti
ENSPCIG00000029047	PTCD2	100	59.635	ENSRROG00000000080	PTCD2	100	59.635	Rhinopithecus_roxellana
ENSPCIG00000029047	PTCD2	100	60.156	ENSSBOG00000018911	PTCD2	100	60.156	Saimiri_boliviensis_boliviensis
ENSPCIG00000029047	PTCD2	100	80.208	ENSSHAG00000003833	PTCD2	99	80.208	Sarcophilus_harrisii
ENSPCIG00000029047	PTCD2	92	46.742	ENSSFOG00015015415	ptcd2	91	46.742	Scleropages_formosus
ENSPCIG00000029047	PTCD2	98	44.828	ENSSMAG00000010350	ptcd2	97	44.828	Scophthalmus_maximus
ENSPCIG00000029047	PTCD2	94	48.485	ENSSDUG00000008142	ptcd2	90	48.485	Seriola_dumerili
ENSPCIG00000029047	PTCD2	94	48.209	ENSSLDG00000015284	ptcd2	95	48.209	Seriola_lalandi_dorsalis
ENSPCIG00000029047	PTCD2	81	54.693	ENSSARG00000004983	PTCD2	99	54.693	Sorex_araneus
ENSPCIG00000029047	PTCD2	99	51.429	ENSSPUG00000000176	PTCD2	96	51.429	Sphenodon_punctatus
ENSPCIG00000029047	PTCD2	92	46.910	ENSSPAG00000008591	ptcd2	91	46.910	Stegastes_partitus
ENSPCIG00000029047	PTCD2	100	59.375	ENSSSCG00000016975	PTCD2	90	59.375	Sus_scrofa
ENSPCIG00000029047	PTCD2	90	52.907	ENSTGUG00000005705	PTCD2	99	52.907	Taeniopygia_guttata
ENSPCIG00000029047	PTCD2	99	57.853	ENSTBEG00000016559	PTCD2	98	57.853	Tupaia_belangeri
ENSPCIG00000029047	PTCD2	100	59.115	ENSTTRG00000011851	PTCD2	99	59.115	Tursiops_truncatus
ENSPCIG00000029047	PTCD2	100	59.635	ENSUAMG00000007583	PTCD2	90	59.635	Ursus_americanus
ENSPCIG00000029047	PTCD2	100	59.375	ENSUMAG00000007666	PTCD2	100	59.375	Ursus_maritimus
ENSPCIG00000029047	PTCD2	100	58.333	ENSVPAG00000009597	PTCD2	99	58.333	Vicugna_pacos
ENSPCIG00000029047	PTCD2	100	59.896	ENSVVUG00000007299	-	100	59.896	Vulpes_vulpes
ENSPCIG00000029047	PTCD2	92	52.809	ENSXETG00000031652	PTCD2	92	52.809	Xenopus_tropicalis
ENSPCIG00000029047	PTCD2	86	47.416	ENSXMAG00000005940	ptcd2	84	46.761	Xiphophorus_maculatus