EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000029529 (Gene tree)
Gene ID: 110197357
Gene Symbol: ZC3H13
Alias: -
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 76549 bases
Position: chrFUWB01000252.1:879388-955936
Accession: 110197357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000040365	zf-CCCH	PF00642.24	5.1e-09	1	1
ENSPCIP00000040362	zf-CCCH	PF00642.24	6.7e-09	1	1
ENSPCIP00000040360	zf-CCCH	PF00642.24	7e-09	1	1
ENSPCIP00000040358	zf-CCCH	PF00642.24	7e-09	1	1
ENSPCIP00000040354	zf-CCCH	PF00642.24	7.3e-09	1	1
ENSPCIP00000040351	zf-CCCH	PF00642.24	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000049707	ZC3H13-206	4616	-	ENSPCIP00000040365	1356 (aa)	-	-
ENSPCIT00000049703	ZC3H13-205	5150	-	ENSPCIP00000040362	1533 (aa)	-	-
ENSPCIT00000049701	ZC3H13-204	5324	-	ENSPCIP00000040360	1591 (aa)	-	-
ENSPCIT00000049690	ZC3H13-201	5522	XM_020971196	ENSPCIP00000040351	1657 (aa)	XP_020826855	-
ENSPCIT00000049695	ZC3H13-202	5486	XM_020971204	ENSPCIP00000040354	1645 (aa)	XP_020826863	-
ENSPCIT00000049699	ZC3H13-203	5348	-	ENSPCIP00000040358	1599 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000029529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000029529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000029529	ZC3H13	63	65.108	ENSAPEG00000004887	zc3h13	54	70.130	Amphiprion_percula
ENSPCIG00000029529	ZC3H13	52	42.914	ENSATEG00000003937	zc3h13	54	68.313	Anabas_testudineus
ENSPCIG00000029529	ZC3H13	92	85.498	ENSAPLG00000002707	ZC3H13	66	85.498	Anas_platyrhynchos
ENSPCIG00000029529	ZC3H13	60	70.485	ENSACLG00000027909	zc3h13	53	70.435	Astatotilapia_calliptera
ENSPCIG00000029529	ZC3H13	61	75.850	ENSCCAG00000032728	ZC3H13	50	83.366	Cebus_capucinus
ENSPCIG00000029529	ZC3H13	84	92.035	ENSCHOG00000009724	ZC3H13	87	92.035	Choloepus_hoffmanni
ENSPCIG00000029529	ZC3H13	60	88.696	ENSECAG00000022843	ZC3H13	92	82.819	Equus_caballus
ENSPCIG00000029529	ZC3H13	84	51.608	ENSGACG00000015166	zc3h13	55	73.953	Gasterosteus_aculeatus
ENSPCIG00000029529	ZC3H13	70	65.759	ENSKMAG00000010701	zc3h13	74	49.512	Kryptolebias_marmoratus
ENSPCIG00000029529	ZC3H13	70	73.766	ENSLACG00000003806	ZC3H13	64	84.038	Latimeria_chalumnae
ENSPCIG00000029529	ZC3H13	60	90.213	ENSMLEG00000039387	ZC3H13	69	83.752	Mandrillus_leucophaeus
ENSPCIG00000029529	ZC3H13	60	83.913	ENSMGAG00000014996	ZC3H13	51	77.506	Meleagris_gallopavo
ENSPCIG00000029529	ZC3H13	60	69.565	ENSONIG00000012236	zc3h13	53	70.000	Oreochromis_niloticus
ENSPCIG00000029529	ZC3H13	53	81.785	ENSOANG00000015580	ZC3H13	51	82.152	Ornithorhynchus_anatinus
ENSPCIG00000029529	ZC3H13	65	66.379	ENSORLG00000005201	zc3h13	58	62.069	Oryzias_latipes
ENSPCIG00000029529	ZC3H13	59	70.283	ENSORLG00020016576	zc3h13	54	65.289	Oryzias_latipes_hni
ENSPCIG00000029529	ZC3H13	65	66.379	ENSORLG00015014966	zc3h13	55	65.289	Oryzias_latipes_hsok
ENSPCIG00000029529	ZC3H13	52	84.627	ENSPSIG00000012518	ZC3H13	99	82.953	Pelodiscus_sinensis
ENSPCIG00000029529	ZC3H13	68	91.964	ENSPCAG00000001146	ZC3H13	74	91.964	Procavia_capensis
ENSPCIG00000029529	ZC3H13	56	94.595	ENSPVAG00000012353	ZC3H13	83	77.872	Pteropus_vampyrus
ENSPCIG00000029529	ZC3H13	52	70.000	ENSPNYG00000016000	zc3h13	63	70.435	Pundamilia_nyererei
ENSPCIG00000029529	ZC3H13	53	88.764	ENSSARG00000007106	ZC3H13	50	88.764	Sorex_araneus
ENSPCIG00000029529	ZC3H13	61	69.266	ENSTNIG00000014523	zc3h13	52	69.027	Tetraodon_nigroviridis
ENSPCIG00000029529	ZC3H13	74	82.524	ENSTTRG00000003611	ZC3H13	92	78.346	Tursiops_truncatus
ENSPCIG00000029529	ZC3H13	84	86.486	ENSVPAG00000005179	ZC3H13	84	86.486	Vicugna_pacos
ENSPCIG00000029529	ZC3H13	83	78.544	ENSXETG00000014637	zc3h13	97	72.905	Xenopus_tropicalis