EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000029710 (Gene tree)
Gene ID: 110217827
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 77922 bases
Position: chrFUWB01000168.1:1379861-1457782
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000040621	SpoU_methylase	PF00588.19	3.3e-30	1	1
ENSPCIP00000040620	SpoU_methylase	PF00588.19	3.5e-30	1	1
ENSPCIP00000040618	SpoU_methylase	PF00588.19	3.6e-30	1	1
ENSPCIP00000040615	SpoU_methylase	PF00588.19	3.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000050020	TARBP1-201	4737	-	ENSPCIP00000040615	1578 (aa)	-	-
ENSPCIT00000050023	TARBP1-202	4704	-	ENSPCIP00000040618	1567 (aa)	-	-
ENSPCIT00000050025	TARBP1-203	4464	-	ENSPCIP00000040620	1487 (aa)	-	-
ENSPCIT00000050026	TARBP1-204	4425	-	ENSPCIP00000040621	1474 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000029710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000029710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000029710	TARBP1	99	82.524	ENSG00000059588	TARBP1	92	82.524	Homo_sapiens
ENSPCIG00000029710	TARBP1	98	69.388	ENSAPOG00000016419	si:dkey-85a20.4	76	69.388	Acanthochromis_polyacanthus
ENSPCIG00000029710	TARBP1	82	83.010	ENSAMEG00000003359	TARBP1	91	83.010	Ailuropoda_melanoleuca
ENSPCIG00000029710	TARBP1	83	67.347	ENSATEG00000020266	si:dkey-85a20.4	77	67.347	Anabas_testudineus
ENSPCIG00000029710	TARBP1	81	85.437	ENSAPLG00000007666	TARBP1	90	87.685	Anas_platyrhynchos
ENSPCIG00000029710	TARBP1	97	75.000	ENSACAG00000001142	TARBP1	90	73.514	Anolis_carolinensis
ENSPCIG00000029710	TARBP1	91	81.553	ENSANAG00000022031	TARBP1	91	81.553	Aotus_nancymaae
ENSPCIG00000029710	TARBP1	99	86.634	ENSBTAG00000004517	TARBP1	92	86.634	Bos_taurus
ENSPCIG00000029710	TARBP1	99	80.583	ENSCJAG00000018155	TARBP1	92	80.583	Callithrix_jacchus
ENSPCIG00000029710	TARBP1	87	81.553	ENSCAFG00000011533	TARBP1	91	81.553	Canis_familiaris
ENSPCIG00000029710	TARBP1	99	81.553	ENSCAFG00020027141	TARBP1	92	81.553	Canis_lupus_dingo
ENSPCIG00000029710	TARBP1	99	86.634	ENSCHIG00000011437	TARBP1	91	86.634	Capra_hircus
ENSPCIG00000029710	TARBP1	79	85.366	ENSTSYG00000010382	TARBP1	87	85.366	Carlito_syrichta
ENSPCIG00000029710	TARBP1	74	78.873	ENSCAPG00000010831	TARBP1	92	78.873	Cavia_aperea
ENSPCIG00000029710	TARBP1	99	80.882	ENSCPOG00000013995	TARBP1	91	80.882	Cavia_porcellus
ENSPCIG00000029710	TARBP1	99	82.039	ENSCCAG00000037278	TARBP1	92	82.039	Cebus_capucinus
ENSPCIG00000029710	TARBP1	99	83.495	ENSCATG00000011754	TARBP1	92	83.495	Cercocebus_atys
ENSPCIG00000029710	TARBP1	79	80.882	ENSCLAG00000003655	TARBP1	86	80.882	Chinchilla_lanigera
ENSPCIG00000029710	TARBP1	76	83.981	ENSCSAG00000010100	TARBP1	90	83.981	Chlorocebus_sabaeus
ENSPCIG00000029710	TARBP1	92	85.981	ENSCPBG00000005587	TARBP1	89	85.981	Chrysemys_picta_bellii
ENSPCIG00000029710	TARBP1	81	83.495	ENSCANG00000034343	TARBP1	90	83.495	Colobus_angolensis_palliatus
ENSPCIG00000029710	TARBP1	98	82.051	ENSCGRG00001016690	Tarbp1	90	82.051	Cricetulus_griseus_chok1gshd
ENSPCIG00000029710	TARBP1	87	82.051	ENSCGRG00000016893	Tarbp1	86	82.051	Cricetulus_griseus_crigri
ENSPCIG00000029710	TARBP1	96	69.036	ENSCSEG00000005255	si:dkey-85a20.4	90	69.036	Cynoglossus_semilaevis
ENSPCIG00000029710	TARBP1	97	68.984	ENSDARG00000079055	si:dkey-85a20.4	78	68.984	Danio_rerio
ENSPCIG00000029710	TARBP1	99	86.408	ENSDNOG00000008637	TARBP1	92	86.408	Dasypus_novemcinctus
ENSPCIG00000029710	TARBP1	76	78.947	ENSDORG00000007984	Tarbp1	88	78.947	Dipodomys_ordii
ENSPCIG00000029710	TARBP1	99	85.922	ENSEASG00005000252	TARBP1	92	85.922	Equus_asinus_asinus
ENSPCIG00000029710	TARBP1	99	85.922	ENSECAG00000023673	TARBP1	92	85.922	Equus_caballus
ENSPCIG00000029710	TARBP1	81	69.189	ENSELUG00000012193	si:dkey-85a20.4	77	69.189	Esox_lucius
ENSPCIG00000029710	TARBP1	99	83.010	ENSFCAG00000014183	TARBP1	92	83.010	Felis_catus
ENSPCIG00000029710	TARBP1	77	86.224	ENSFALG00000013565	TARBP1	90	85.714	Ficedula_albicollis
ENSPCIG00000029710	TARBP1	77	80.488	ENSFDAG00000001308	TARBP1	87	80.488	Fukomys_damarensis
ENSPCIG00000029710	TARBP1	91	63.077	ENSFHEG00000007565	si:dkey-85a20.4	83	60.680	Fundulus_heteroclitus
ENSPCIG00000029710	TARBP1	81	67.662	ENSGMOG00000004549	si:dkey-85a20.4	86	67.662	Gadus_morhua
ENSPCIG00000029710	TARBP1	99	83.981	ENSGALG00000011000	TARBP1	92	83.981	Gallus_gallus
ENSPCIG00000029710	TARBP1	98	69.849	ENSGAFG00000007387	si:dkey-85a20.4	76	69.849	Gambusia_affinis
ENSPCIG00000029710	TARBP1	83	66.502	ENSGACG00000005865	si:dkey-85a20.4	89	66.502	Gasterosteus_aculeatus
ENSPCIG00000029710	TARBP1	99	86.893	ENSGAGG00000012102	TARBP1	91	86.893	Gopherus_agassizii
ENSPCIG00000029710	TARBP1	82	81.221	ENSGGOG00000022879	TARBP1	91	81.221	Gorilla_gorilla
ENSPCIG00000029710	TARBP1	83	69.898	ENSHBUG00000008877	si:dkey-85a20.4	76	69.898	Haplochromis_burtoni
ENSPCIG00000029710	TARBP1	99	81.373	ENSHGLG00000011592	TARBP1	91	81.373	Heterocephalus_glaber_female
ENSPCIG00000029710	TARBP1	96	81.373	ENSHGLG00100015169	TARBP1	90	81.373	Heterocephalus_glaber_male
ENSPCIG00000029710	TARBP1	98	70.556	ENSIPUG00000005249	si:dkey-85a20.4	89	70.556	Ictalurus_punctatus
ENSPCIG00000029710	TARBP1	85	77.723	ENSSTOG00000032291	TARBP1	90	77.723	Ictidomys_tridecemlineatus
ENSPCIG00000029710	TARBP1	94	77.000	ENSJJAG00000017840	Tarbp1	89	75.490	Jaculus_jaculus
ENSPCIG00000029710	TARBP1	76	69.072	ENSKMAG00000017546	si:dkey-85a20.4	75	69.072	Kryptolebias_marmoratus
ENSPCIG00000029710	TARBP1	60	69.792	ENSLBEG00000012132	si:dkey-85a20.4	64	69.792	Labrus_bergylta
ENSPCIG00000029710	TARBP1	98	78.218	ENSLACG00000004337	TARBP1	91	78.218	Latimeria_chalumnae
ENSPCIG00000029710	TARBP1	98	73.096	ENSLOCG00000016214	si:dkey-85a20.4	91	73.096	Lepisosteus_oculatus
ENSPCIG00000029710	TARBP1	94	84.848	ENSLAFG00000011394	TARBP1	91	84.848	Loxodonta_africana
ENSPCIG00000029710	TARBP1	99	83.495	ENSMFAG00000041068	TARBP1	91	83.495	Macaca_fascicularis
ENSPCIG00000029710	TARBP1	99	83.495	ENSMMUG00000021703	TARBP1	92	83.495	Macaca_mulatta
ENSPCIG00000029710	TARBP1	99	83.495	ENSMNEG00000045002	TARBP1	92	83.495	Macaca_nemestrina
ENSPCIG00000029710	TARBP1	81	83.495	ENSMLEG00000044182	TARBP1	90	83.495	Mandrillus_leucophaeus
ENSPCIG00000029710	TARBP1	83	67.327	ENSMAMG00000021760	si:dkey-85a20.4	78	67.327	Mastacembelus_armatus
ENSPCIG00000029710	TARBP1	83	69.898	ENSMZEG00005005751	si:dkey-85a20.4	76	69.898	Maylandia_zebra
ENSPCIG00000029710	TARBP1	98	82.051	ENSMAUG00000020968	Tarbp1	90	82.051	Mesocricetus_auratus
ENSPCIG00000029710	TARBP1	98	82.090	ENSMICG00000015280	TARBP1	93	82.090	Microcebus_murinus
ENSPCIG00000029710	TARBP1	98	80.500	ENSMOCG00000004128	Tarbp1	90	80.500	Microtus_ochrogaster
ENSPCIG00000029710	TARBP1	82	67.935	ENSMMOG00000007795	si:dkey-85a20.4	76	67.935	Mola_mola
ENSPCIG00000029710	TARBP1	99	95.146	ENSMODG00000008504	TARBP1	92	95.146	Monodelphis_domestica
ENSPCIG00000029710	TARBP1	82	68.817	ENSMALG00000002916	si:dkey-85a20.4	77	68.817	Monopterus_albus
ENSPCIG00000029710	TARBP1	98	80.500	MGP_CAROLIEiJ_G0031729	Tarbp1	90	80.500	Mus_caroli
ENSPCIG00000029710	TARBP1	98	81.000	ENSMUSG00000090290	Tarbp1	90	81.000	Mus_musculus
ENSPCIG00000029710	TARBP1	98	81.592	MGP_PahariEiJ_G0023326	Tarbp1	90	81.592	Mus_pahari
ENSPCIG00000029710	TARBP1	98	81.500	MGP_SPRETEiJ_G0032846	Tarbp1	90	81.500	Mus_spretus
ENSPCIG00000029710	TARBP1	73	84.653	ENSMPUG00000002802	TARBP1	89	84.653	Mustela_putorius_furo
ENSPCIG00000029710	TARBP1	81	78.218	ENSMLUG00000002414	TARBP1	90	78.218	Myotis_lucifugus
ENSPCIG00000029710	TARBP1	99	82.524	ENSNLEG00000002518	TARBP1	92	82.524	Nomascus_leucogenys
ENSPCIG00000029710	TARBP1	64	96.117	ENSMEUG00000011370	-	58	96.117	Notamacropus_eugenii
ENSPCIG00000029710	TARBP1	67	82.653	ENSOPRG00000013822	TARBP1	62	82.653	Ochotona_princeps
ENSPCIG00000029710	TARBP1	99	80.882	ENSODEG00000005238	TARBP1	91	80.882	Octodon_degus
ENSPCIG00000029710	TARBP1	83	69.898	ENSONIG00000009789	si:dkey-85a20.4	88	69.898	Oreochromis_niloticus
ENSPCIG00000029710	TARBP1	98	81.000	ENSOCUG00000017418	TARBP1	91	81.000	Oryctolagus_cuniculus
ENSPCIG00000029710	TARBP1	98	66.332	ENSORLG00000010529	si:dkey-85a20.4	76	66.332	Oryzias_latipes
ENSPCIG00000029710	TARBP1	98	66.332	ENSORLG00020019264	si:dkey-85a20.4	75	66.332	Oryzias_latipes_hni
ENSPCIG00000029710	TARBP1	98	66.332	ENSORLG00015003276	si:dkey-85a20.4	76	66.332	Oryzias_latipes_hsok
ENSPCIG00000029710	TARBP1	99	72.330	ENSOGAG00000002379	TARBP1	92	72.330	Otolemur_garnettii
ENSPCIG00000029710	TARBP1	91	86.634	ENSOARG00000003434	TARBP1	90	86.634	Ovis_aries
ENSPCIG00000029710	TARBP1	81	82.524	ENSPPAG00000028097	TARBP1	90	82.524	Pan_paniscus
ENSPCIG00000029710	TARBP1	99	83.010	ENSPPRG00000013561	TARBP1	91	83.010	Panthera_pardus
ENSPCIG00000029710	TARBP1	81	83.010	ENSPTIG00000009281	TARBP1	90	83.010	Panthera_tigris_altaica
ENSPCIG00000029710	TARBP1	99	82.524	ENSPTRG00000002124	TARBP1	92	82.524	Pan_troglodytes
ENSPCIG00000029710	TARBP1	99	83.495	ENSPANG00000021933	TARBP1	92	83.495	Papio_anubis
ENSPCIG00000029710	TARBP1	98	68.020	ENSPKIG00000016716	si:dkey-85a20.4	75	68.020	Paramormyrops_kingsleyae
ENSPCIG00000029710	TARBP1	76	86.893	ENSPSIG00000010699	TARBP1	90	86.893	Pelodiscus_sinensis
ENSPCIG00000029710	TARBP1	98	81.633	ENSPEMG00000006888	Tarbp1	89	81.633	Peromyscus_maniculatus_bairdii
ENSPCIG00000029710	TARBP1	83	68.342	ENSPFOG00000013020	si:dkey-85a20.4	88	68.342	Poecilia_formosa
ENSPCIG00000029710	TARBP1	98	70.051	ENSPLAG00000006044	si:dkey-85a20.4	90	70.051	Poecilia_latipinna
ENSPCIG00000029710	TARBP1	98	70.051	ENSPMEG00000017857	si:dkey-85a20.4	90	70.051	Poecilia_mexicana
ENSPCIG00000029710	TARBP1	98	69.347	ENSPREG00000022753	si:dkey-85a20.4	90	69.347	Poecilia_reticulata
ENSPCIG00000029710	TARBP1	89	83.010	ENSPPYG00000000102	TARBP1	91	83.010	Pongo_abelii
ENSPCIG00000029710	TARBP1	89	86.667	ENSPCAG00000004808	TARBP1	82	86.667	Procavia_capensis
ENSPCIG00000029710	TARBP1	99	83.333	ENSPCOG00000005666	TARBP1	91	83.333	Propithecus_coquereli
ENSPCIG00000029710	TARBP1	98	71.859	ENSPVAG00000014798	TARBP1	90	71.859	Pteropus_vampyrus
ENSPCIG00000029710	TARBP1	83	69.192	ENSPNYG00000019135	si:dkey-85a20.4	75	69.192	Pundamilia_nyererei
ENSPCIG00000029710	TARBP1	98	82.000	ENSRNOG00000053574	Tarbp1	90	82.000	Rattus_norvegicus
ENSPCIG00000029710	TARBP1	88	83.981	ENSRBIG00000043362	TARBP1	90	83.981	Rhinopithecus_bieti
ENSPCIG00000029710	TARBP1	99	83.981	ENSRROG00000029527	TARBP1	91	83.981	Rhinopithecus_roxellana
ENSPCIG00000029710	TARBP1	85	82.039	ENSSBOG00000034503	TARBP1	90	82.039	Saimiri_boliviensis_boliviensis
ENSPCIG00000029710	TARBP1	82	95.146	ENSSHAG00000000013	TARBP1	90	95.146	Sarcophilus_harrisii
ENSPCIG00000029710	TARBP1	81	68.718	ENSSFOG00015002660	si:dkey-85a20.4	87	67.839	Scleropages_formosus
ENSPCIG00000029710	TARBP1	81	68.878	ENSSMAG00000007081	si:dkey-85a20.4	74	68.878	Scophthalmus_maximus
ENSPCIG00000029710	TARBP1	82	69.072	ENSSDUG00000023566	si:dkey-85a20.4	76	69.072	Seriola_dumerili
ENSPCIG00000029710	TARBP1	83	68.878	ENSSLDG00000020200	si:dkey-85a20.4	77	68.878	Seriola_lalandi_dorsalis
ENSPCIG00000029710	TARBP1	87	81.373	ENSSARG00000012207	TARBP1	81	81.373	Sorex_araneus
ENSPCIG00000029710	TARBP1	99	84.466	ENSSPUG00000015364	TARBP1	91	84.466	Sphenodon_punctatus
ENSPCIG00000029710	TARBP1	83	68.878	ENSSPAG00000007213	si:dkey-85a20.4	76	68.878	Stegastes_partitus
ENSPCIG00000029710	TARBP1	99	83.333	ENSSSCG00000010160	TARBP1	92	83.333	Sus_scrofa
ENSPCIG00000029710	TARBP1	77	86.000	ENSTGUG00000010214	TARBP1	90	86.000	Taeniopygia_guttata
ENSPCIG00000029710	TARBP1	91	69.036	ENSTNIG00000016586	si:dkey-85a20.4	89	67.822	Tetraodon_nigroviridis
ENSPCIG00000029710	TARBP1	89	84.000	ENSTTRG00000008707	TARBP1	87	84.000	Tursiops_truncatus
ENSPCIG00000029710	TARBP1	80	83.495	ENSUMAG00000006730	TARBP1	89	83.495	Ursus_maritimus
ENSPCIG00000029710	TARBP1	69	82.292	ENSVPAG00000007665	TARBP1	71	82.292	Vicugna_pacos
ENSPCIG00000029710	TARBP1	85	81.553	ENSVVUG00000007460	TARBP1	90	81.553	Vulpes_vulpes
ENSPCIG00000029710	TARBP1	80	71.717	ENSXETG00000016224	tarbp1	90	71.717	Xenopus_tropicalis
ENSPCIG00000029710	TARBP1	75	67.914	ENSXCOG00000011779	si:dkey-85a20.4	81	67.914	Xiphophorus_couchianus
ENSPCIG00000029710	TARBP1	60	63.758	ENSXMAG00000009600	si:dkey-85a20.4	86	63.758	Xiphophorus_maculatus