EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000029949 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 26514 bases
Position: chrFUWB01000262.1:1916297-1942810
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000040935	CSD	PF00313.22	8.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000050423	YBX3-201	979	-	ENSPCIP00000040935	252 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000029949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000029949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000029949	YBX3	100	44.689	ENSPCIG00000009151	YBX1	73	47.510

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000029949	YBX3	100	79.615	ENSG00000060138	YBX3	85	97.436	Homo_sapiens
ENSPCIG00000029949	YBX3	100	82.946	ENSAMEG00000009393	YBX3	73	82.946	Ailuropoda_melanoleuca
ENSPCIG00000029949	YBX3	100	65.000	ENSAPLG00000003147	YBX3	91	64.615	Anas_platyrhynchos
ENSPCIG00000029949	YBX3	60	91.304	ENSANAG00000033366	-	56	84.615	Aotus_nancymaae
ENSPCIG00000029949	YBX3	100	78.846	ENSANAG00000024492	-	82	80.769	Aotus_nancymaae
ENSPCIG00000029949	YBX3	100	79.457	ENSBTAG00000009663	YBX3	68	78.125	Bos_taurus
ENSPCIG00000029949	YBX3	65	82.828	ENSCJAG00000033824	-	68	80.583	Callithrix_jacchus
ENSPCIG00000029949	YBX3	100	78.846	ENSCJAG00000021660	-	70	80.769	Callithrix_jacchus
ENSPCIG00000029949	YBX3	100	82.558	ENSCAFG00000013401	YBX3	75	85.294	Canis_familiaris
ENSPCIG00000029949	YBX3	97	82.072	ENSCAFG00020006412	YBX3	69	82.072	Canis_lupus_dingo
ENSPCIG00000029949	YBX3	100	79.845	ENSCHIG00000010863	YBX3	72	79.845	Capra_hircus
ENSPCIG00000029949	YBX3	100	46.484	ENSTSYG00000035821	-	62	93.333	Carlito_syrichta
ENSPCIG00000029949	YBX3	100	79.615	ENSTSYG00000004204	-	79	81.538	Carlito_syrichta
ENSPCIG00000029949	YBX3	93	82.427	ENSCAPG00000015039	YBX3	84	79.923	Cavia_aperea
ENSPCIG00000029949	YBX3	93	82.427	ENSCPOG00000011329	YBX3	76	79.923	Cavia_porcellus
ENSPCIG00000029949	YBX3	100	77.692	ENSCCAG00000016469	YBX3	70	79.615	Cebus_capucinus
ENSPCIG00000029949	YBX3	100	79.615	ENSCATG00000034411	YBX3	69	81.538	Cercocebus_atys
ENSPCIG00000029949	YBX3	100	80.695	ENSCLAG00000016030	YBX3	85	80.695	Chinchilla_lanigera
ENSPCIG00000029949	YBX3	100	79.231	ENSCSAG00000008744	YBX3	69	81.154	Chlorocebus_sabaeus
ENSPCIG00000029949	YBX3	74	97.436	ENSCHOG00000011988	YBX3	51	97.436	Choloepus_hoffmanni
ENSPCIG00000029949	YBX3	100	76.953	ENSCPBG00000014147	YBX3	72	76.953	Chrysemys_picta_bellii
ENSPCIG00000029949	YBX3	100	79.231	ENSCANG00000036801	YBX3	82	81.154	Colobus_angolensis_palliatus
ENSPCIG00000029949	YBX3	100	81.853	ENSCGRG00001016148	Ybx3	71	81.853	Cricetulus_griseus_chok1gshd
ENSPCIG00000029949	YBX3	100	81.853	ENSCGRG00000004563	Ybx3	87	81.853	Cricetulus_griseus_crigri
ENSPCIG00000029949	YBX3	100	81.467	ENSDORG00000009103	Ybx3	73	81.467	Dipodomys_ordii
ENSPCIG00000029949	YBX3	100	71.264	ENSETEG00000002557	YBX3	91	69.231	Echinops_telfairi
ENSPCIG00000029949	YBX3	97	80.800	ENSEASG00005014726	YBX3	62	89.231	Equus_asinus_asinus
ENSPCIG00000029949	YBX3	97	82.869	ENSECAG00000013777	YBX3	69	82.869	Equus_caballus
ENSPCIG00000029949	YBX3	100	76.923	ENSEEUG00000010415	YBX3	91	78.846	Erinaceus_europaeus
ENSPCIG00000029949	YBX3	100	79.923	ENSFCAG00000027748	YBX3	69	81.853	Felis_catus
ENSPCIG00000029949	YBX3	100	56.420	ENSFALG00000003661	YBX3	91	60.311	Ficedula_albicollis
ENSPCIG00000029949	YBX3	93	79.498	ENSFDAG00000021192	YBX3	83	77.220	Fukomys_damarensis
ENSPCIG00000029949	YBX3	100	54.086	ENSGALG00000031890	YBX3	65	54.724	Gallus_gallus
ENSPCIG00000029949	YBX3	100	75.781	ENSGAGG00000017780	YBX3	72	75.781	Gopherus_agassizii
ENSPCIG00000029949	YBX3	100	79.615	ENSGGOG00000001352	YBX3	69	81.538	Gorilla_gorilla
ENSPCIG00000029949	YBX3	93	68.724	ENSHGLG00000014798	-	76	69.318	Heterocephalus_glaber_female
ENSPCIG00000029949	YBX3	92	75.417	ENSHGLG00000015495	-	69	74.583	Heterocephalus_glaber_female
ENSPCIG00000029949	YBX3	64	98.592	ENSHGLG00100003589	YBX3	76	60.784	Heterocephalus_glaber_male
ENSPCIG00000029949	YBX3	100	76.062	ENSSTOG00000032577	-	73	75.194	Ictidomys_tridecemlineatus
ENSPCIG00000029949	YBX3	100	76.062	ENSSTOG00000002108	-	79	76.062	Ictidomys_tridecemlineatus
ENSPCIG00000029949	YBX3	100	58.846	ENSJJAG00000014239	Ybx3	77	75.000	Jaculus_jaculus
ENSPCIG00000029949	YBX3	100	82.239	ENSLAFG00000017247	YBX3	77	82.239	Loxodonta_africana
ENSPCIG00000029949	YBX3	100	79.231	ENSMFAG00000039369	YBX3	70	81.154	Macaca_fascicularis
ENSPCIG00000029949	YBX3	100	79.231	ENSMMUG00000022469	YBX3	80	81.154	Macaca_mulatta
ENSPCIG00000029949	YBX3	100	79.231	ENSMNEG00000045109	YBX3	70	81.154	Macaca_nemestrina
ENSPCIG00000029949	YBX3	100	81.853	ENSMLEG00000033618	YBX3	73	81.853	Mandrillus_leucophaeus
ENSPCIG00000029949	YBX3	100	62.109	ENSMGAG00000014224	YBX3	90	62.109	Meleagris_gallopavo
ENSPCIG00000029949	YBX3	100	81.467	ENSMAUG00000012185	Ybx3	80	81.467	Mesocricetus_auratus
ENSPCIG00000029949	YBX3	100	83.398	ENSMICG00000038002	-	70	83.398	Microcebus_murinus
ENSPCIG00000029949	YBX3	80	78.947	ENSMICG00000031459	-	66	48.425	Microcebus_murinus
ENSPCIG00000029949	YBX3	100	81.853	ENSMOCG00000016291	Ybx3	84	81.853	Microtus_ochrogaster
ENSPCIG00000029949	YBX3	100	89.370	ENSMODG00000018248	YBX3	82	89.370	Monodelphis_domestica
ENSPCIG00000029949	YBX3	100	82.625	MGP_CAROLIEiJ_G0028947	Ybx3	71	82.625	Mus_caroli
ENSPCIG00000029949	YBX3	100	83.398	ENSMUSG00000030189	Ybx3	71	83.398	Mus_musculus
ENSPCIG00000029949	YBX3	100	82.625	MGP_PahariEiJ_G0022709	Ybx3	71	82.625	Mus_pahari
ENSPCIG00000029949	YBX3	100	83.012	MGP_SPRETEiJ_G0029994	Ybx3	71	83.012	Mus_spretus
ENSPCIG00000029949	YBX3	100	65.918	ENSMPUG00000011810	YBX3	70	68.914	Mustela_putorius_furo
ENSPCIG00000029949	YBX3	100	80.228	ENSMLUG00000007476	YBX3	98	80.228	Myotis_lucifugus
ENSPCIG00000029949	YBX3	100	82.239	ENSNGAG00000000710	Ybx3	57	82.239	Nannospalax_galili
ENSPCIG00000029949	YBX3	100	75.385	ENSNLEG00000034844	YBX3	73	75.385	Nomascus_leucogenys
ENSPCIG00000029949	YBX3	54	97.778	ENSMEUG00000002507	-	65	97.778	Notamacropus_eugenii
ENSPCIG00000029949	YBX3	93	75.314	ENSODEG00000017957	YBX3	76	72.587	Octodon_degus
ENSPCIG00000029949	YBX3	100	83.398	ENSOCUG00000001889	YBX3	75	83.398	Oryctolagus_cuniculus
ENSPCIG00000029949	YBX3	100	80.755	ENSOGAG00000013245	YBX3	70	80.755	Otolemur_garnettii
ENSPCIG00000029949	YBX3	100	72.973	ENSOARG00000020919	YBX3	87	70.656	Ovis_aries
ENSPCIG00000029949	YBX3	100	79.615	ENSPPAG00000039068	YBX3	72	81.538	Pan_paniscus
ENSPCIG00000029949	YBX3	100	80.309	ENSPPRG00000005859	YBX3	69	82.239	Panthera_pardus
ENSPCIG00000029949	YBX3	100	82.558	ENSPTIG00000005322	YBX3	73	82.558	Panthera_tigris_altaica
ENSPCIG00000029949	YBX3	100	79.615	ENSPTRG00000004681	YBX3	69	81.538	Pan_troglodytes
ENSPCIG00000029949	YBX3	100	79.615	ENSPANG00000010280	YBX3	70	81.538	Papio_anubis
ENSPCIG00000029949	YBX3	73	96.154	ENSPSIG00000009247	YBX3	88	54.724	Pelodiscus_sinensis
ENSPCIG00000029949	YBX3	71	98.592	ENSPEMG00000010391	-	71	58.268	Peromyscus_maniculatus_bairdii
ENSPCIG00000029949	YBX3	100	81.853	ENSPEMG00000012132	-	81	81.853	Peromyscus_maniculatus_bairdii
ENSPCIG00000029949	YBX3	100	79.231	ENSPPYG00000004279	YBX3	70	81.154	Pongo_abelii
ENSPCIG00000029949	YBX3	69	82.222	ENSPCAG00000001397	YBX3	62	82.222	Procavia_capensis
ENSPCIG00000029949	YBX3	54	87.857	ENSPCOG00000011663	YBX3	59	86.111	Propithecus_coquereli
ENSPCIG00000029949	YBX3	100	65.637	ENSPVAG00000006740	YBX3	69	65.637	Pteropus_vampyrus
ENSPCIG00000029949	YBX3	100	83.012	ENSRNOG00000005480	Ybx3	71	83.012	Rattus_norvegicus
ENSPCIG00000029949	YBX3	100	78.462	ENSRBIG00000039208	YBX3	70	80.385	Rhinopithecus_bieti
ENSPCIG00000029949	YBX3	100	78.462	ENSRROG00000029638	YBX3	70	80.385	Rhinopithecus_roxellana
ENSPCIG00000029949	YBX3	100	80.695	ENSSBOG00000030573	YBX3	76	80.385	Saimiri_boliviensis_boliviensis
ENSPCIG00000029949	YBX3	100	88.679	ENSSHAG00000003262	YBX3	89	89.811	Sarcophilus_harrisii
ENSPCIG00000029949	YBX3	100	80.695	ENSSSCG00000000633	YBX3	66	85.356	Sus_scrofa
ENSPCIG00000029949	YBX3	100	61.538	ENSTGUG00000012047	YBX3	91	61.538	Taeniopygia_guttata
ENSPCIG00000029949	YBX3	100	80.000	ENSTBEG00000012570	YBX3	71	81.923	Tupaia_belangeri
ENSPCIG00000029949	YBX3	100	74.046	ENSTTRG00000008045	YBX3	98	75.191	Tursiops_truncatus
ENSPCIG00000029949	YBX3	99	81.250	ENSUAMG00000016662	YBX3	93	81.250	Ursus_americanus
ENSPCIG00000029949	YBX3	100	82.558	ENSUMAG00000016118	YBX3	85	82.558	Ursus_maritimus
ENSPCIG00000029949	YBX3	100	54.373	ENSVPAG00000000876	YBX3	91	57.795	Vicugna_pacos
ENSPCIG00000029949	YBX3	97	82.470	ENSVVUG00000004956	YBX3	93	82.470	Vulpes_vulpes
ENSPCIG00000029949	YBX3	92	70.248	ENSXETG00000016239	ybx3	81	53.409	Xenopus_tropicalis