EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000030606 (Gene tree)
Gene ID: 110221664
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 115500 bases
Position: chrFUWB01000187.1:1076287-1191786
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000041953	MTS	PF05175.14	5.3e-07	1	1
ENSPCIP00000041951	MTS	PF05175.14	5.5e-07	1	1
ENSPCIP00000041954	MTS	PF05175.14	6.5e-07	1	1
ENSPCIP00000041952	MTS	PF05175.14	7.9e-07	1	1
ENSPCIP00000041950	MTS	PF05175.14	9.3e-07	1	1
ENSPCIP00000041953	Methyltransf_31	PF13847.6	7.1e-07	1	1
ENSPCIP00000041951	Methyltransf_31	PF13847.6	7.5e-07	1	1
ENSPCIP00000041954	Methyltransf_31	PF13847.6	8.3e-07	1	1
ENSPCIP00000041952	Methyltransf_31	PF13847.6	8.7e-07	1	1
ENSPCIP00000041950	Methyltransf_31	PF13847.6	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000051652	-	1017	-	ENSPCIP00000041953	338 (aa)	-	-
ENSPCIT00000051651	-	1191	-	ENSPCIP00000041952	396 (aa)	-	-
ENSPCIT00000051650	-	1038	-	ENSPCIP00000041951	345 (aa)	-	-
ENSPCIT00000051653	-	1092	-	ENSPCIP00000041954	363 (aa)	-	-
ENSPCIT00000051649	-	1257	-	ENSPCIP00000041950	418 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000030606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000030606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000030606	-	89	36.076	ENSPCIG00000010181	PRMT6	85	35.671
ENSPCIG00000030606	-	98	76.786	ENSPCIG00000017124	CARM1	62	75.623
ENSPCIG00000030606	-	87	34.868	ENSPCIG00000007372	PRMT1	91	33.234
ENSPCIG00000030606	-	90	36.137	ENSPCIG00000001135	PRMT3	57	36.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000030606	-	96	67.385	ENSAPOG00000020684	carm1l	76	65.507	Acanthochromis_polyacanthus
ENSPCIG00000030606	-	100	65.487	ENSACIG00000024292	-	79	64.740	Amphilophus_citrinellus
ENSPCIG00000030606	-	96	67.385	ENSAOCG00000016803	carm1l	79	65.797	Amphiprion_ocellaris
ENSPCIG00000030606	-	96	67.692	ENSAPEG00000011757	carm1l	74	66.087	Amphiprion_percula
ENSPCIG00000030606	-	98	88.690	ENSACAG00000003227	-	80	88.430	Anolis_carolinensis
ENSPCIG00000030606	-	96	68.615	ENSACLG00000009998	-	69	67.155	Astatotilapia_calliptera
ENSPCIG00000030606	-	96	77.846	ENSAMXG00000020903	carm1l	78	74.444	Astyanax_mexicanus
ENSPCIG00000030606	-	93	89.172	ENSCAFG00000002042	-	99	89.172	Canis_familiaris
ENSPCIG00000030606	-	96	91.692	ENSCPBG00000025471	-	77	91.111	Chrysemys_picta_bellii
ENSPCIG00000030606	-	96	77.538	ENSDARG00000091531	carm1l	79	74.238	Danio_rerio
ENSPCIG00000030606	-	96	89.538	ENSEASG00005010358	-	79	87.603	Equus_asinus_asinus
ENSPCIG00000030606	-	96	89.846	ENSECAG00000009736	-	78	88.154	Equus_caballus
ENSPCIG00000030606	-	96	91.692	ENSGAGG00000021536	-	77	91.111	Gopherus_agassizii
ENSPCIG00000030606	-	96	68.615	ENSHBUG00000022386	-	77	65.805	Haplochromis_burtoni
ENSPCIG00000030606	-	96	83.692	ENSHGLG00000019207	-	78	82.369	Heterocephalus_glaber_female
ENSPCIG00000030606	-	96	76.923	ENSIPUG00000024779	co-prmt	86	73.684	Ictalurus_punctatus
ENSPCIG00000030606	-	96	79.385	ENSLOCG00000012543	carm1l	80	76.075	Lepisosteus_oculatus
ENSPCIG00000030606	-	96	68.827	ENSMAMG00000000357	carm1l	74	68.923	Mastacembelus_armatus
ENSPCIG00000030606	-	96	68.615	ENSMZEG00005021030	-	83	67.976	Maylandia_zebra
ENSPCIG00000030606	-	96	88.615	ENSMICG00000029542	-	78	86.777	Microcebus_murinus
ENSPCIG00000030606	-	96	88.923	ENSMLUG00000022735	-	100	86.981	Myotis_lucifugus
ENSPCIG00000030606	-	95	69.470	ENSNBRG00000013194	-	83	69.231	Neolamprologus_brichardi
ENSPCIG00000030606	-	96	68.615	ENSONIG00000016604	-	78	63.989	Oreochromis_niloticus
ENSPCIG00000030606	-	99	61.159	ENSOMEG00000011226	-	67	63.174	Oryzias_melastigma
ENSPCIG00000030606	-	96	87.654	ENSPPRG00000000748	-	78	83.784	Panthera_pardus
ENSPCIG00000030606	-	96	88.000	ENSPTIG00000021167	-	82	86.313	Panthera_tigris_altaica
ENSPCIG00000030606	-	96	77.538	ENSPKIG00000022185	carm1l	79	74.515	Paramormyrops_kingsleyae
ENSPCIG00000030606	-	93	91.401	ENSPSIG00000017939	-	99	91.401	Pelodiscus_sinensis
ENSPCIG00000030606	-	96	68.615	ENSPNYG00000016436	-	83	67.976	Pundamilia_nyererei
ENSPCIG00000030606	-	96	69.916	ENSPNAG00000026491	carm1l	80	67.513	Pygocentrus_nattereri
ENSPCIG00000030606	-	93	99.682	ENSSHAG00000002395	-	99	99.682	Sarcophilus_harrisii
ENSPCIG00000030606	-	96	76.615	ENSSFOG00015018872	carm1l	85	69.289	Scleropages_formosus
ENSPCIG00000030606	-	96	70.769	ENSSDUG00000018596	-	74	70.769	Seriola_dumerili
ENSPCIG00000030606	-	96	70.462	ENSSLDG00000013596	carm1l	75	70.427	Seriola_lalandi_dorsalis
ENSPCIG00000030606	-	96	91.385	ENSSPUG00000001722	-	79	90.278	Sphenodon_punctatus
ENSPCIG00000030606	-	96	63.265	ENSSPAG00000003543	carm1l	77	62.396	Stegastes_partitus
ENSPCIG00000030606	-	96	90.462	ENSSSCG00000039823	-	73	88.430	Sus_scrofa
ENSPCIG00000030606	-	96	88.000	ENSUMAG00000018187	-	82	85.950	Ursus_maritimus
ENSPCIG00000030606	-	96	89.231	ENSVVUG00000006545	-	87	86.777	Vulpes_vulpes