EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000000676 (Gene tree)
Gene ID: 105812568
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 1149 bases
Position: chrKQ022125.1:1154978-1156126
Accession: 105812568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000000283	RRM_5	PF13893.6	2.2e-11	1	2
ENSPCOP00000000283	RRM_5	PF13893.6	2.2e-11	2	2
ENSPCOP00000000283	RRM_1	PF00076.22	1.1e-77	1	4
ENSPCOP00000000283	RRM_1	PF00076.22	1.1e-77	2	4
ENSPCOP00000000283	RRM_1	PF00076.22	1.1e-77	3	4
ENSPCOP00000000283	RRM_1	PF00076.22	1.1e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000000779	PABPC5-201	1149	XM_012647047	ENSPCOP00000000283	382 (aa)	XP_012502501	A0A2K6EEY5

Gene Model

Click here to download ENSPCOG00000000676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000000676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000000676	PABPC5	96	59.504	ENSPCOG00000020630	PABPC1L	62	59.551
ENSPCOG00000000676	PABPC5	96	62.088	ENSPCOG00000025578	PABPC4L	98	62.079
ENSPCOG00000000676	PABPC5	94	30.216	ENSPCOG00000003300	ELAVL1	92	30.403
ENSPCOG00000000676	PABPC5	93	60.714	ENSPCOG00000026349	-	98	60.417
ENSPCOG00000000676	PABPC5	94	35.802	ENSPCOG00000022819	ELAVL2	87	35.802
ENSPCOG00000000676	PABPC5	96	58.528	ENSPCOG00000025882	-	62	53.371
ENSPCOG00000000676	PABPC5	83	31.737	ENSPCOG00000008197	NONO	55	31.579
ENSPCOG00000000676	PABPC5	61	35.616	ENSPCOG00000004694	CELF3	71	33.333
ENSPCOG00000000676	PABPC5	95	64.516	ENSPCOG00000020234	PABPC1	63	64.516
ENSPCOG00000000676	PABPC5	97	63.612	ENSPCOG00000013197	PABPC3	59	64.607
ENSPCOG00000000676	PABPC5	96	67.218	ENSPCOG00000023725	-	58	67.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000000676	PABPC5	99	97.375	ENSG00000174740	PABPC5	99	97.375	Homo_sapiens
ENSPCOG00000000676	PABPC5	99	97.113	ENSAMEG00000020114	PABPC5	100	97.113	Ailuropoda_melanoleuca
ENSPCOG00000000676	PABPC5	99	97.375	ENSANAG00000005063	PABPC5	99	97.375	Aotus_nancymaae
ENSPCOG00000000676	PABPC5	100	96.335	ENSBTAG00000019942	PABPC5	100	96.335	Bos_taurus
ENSPCOG00000000676	PABPC5	99	96.850	ENSCJAG00000003665	PABPC5	99	96.850	Callithrix_jacchus
ENSPCOG00000000676	PABPC5	100	96.597	ENSCAFG00000017452	PABPC5	100	96.597	Canis_familiaris
ENSPCOG00000000676	PABPC5	100	96.335	ENSCHIG00000019004	PABPC5	100	96.335	Capra_hircus
ENSPCOG00000000676	PABPC5	100	96.859	ENSTSYG00000036351	PABPC5	100	96.859	Carlito_syrichta
ENSPCOG00000000676	PABPC5	99	87.435	ENSCAPG00000010714	PABPC5	100	87.435	Cavia_aperea
ENSPCOG00000000676	PABPC5	100	93.717	ENSCPOG00000002555	PABPC5	100	93.717	Cavia_porcellus
ENSPCOG00000000676	PABPC5	99	97.375	ENSCCAG00000032154	PABPC5	99	97.375	Cebus_capucinus
ENSPCOG00000000676	PABPC5	99	97.113	ENSCATG00000043083	PABPC5	99	97.113	Cercocebus_atys
ENSPCOG00000000676	PABPC5	100	95.026	ENSCLAG00000000647	PABPC5	100	95.026	Chinchilla_lanigera
ENSPCOG00000000676	PABPC5	99	97.113	ENSCSAG00000000065	PABPC5	99	97.113	Chlorocebus_sabaeus
ENSPCOG00000000676	PABPC5	99	97.113	ENSCANG00000011473	PABPC5	99	97.113	Colobus_angolensis_palliatus
ENSPCOG00000000676	PABPC5	100	93.455	ENSCGRG00000018699	Pabpc5	100	93.455	Cricetulus_griseus_crigri
ENSPCOG00000000676	PABPC5	100	78.590	ENSETEG00000011832	PABPC5	100	78.590	Echinops_telfairi
ENSPCOG00000000676	PABPC5	100	97.120	ENSEASG00005014396	PABPC5	100	97.120	Equus_asinus_asinus
ENSPCOG00000000676	PABPC5	100	97.120	ENSECAG00000003452	PABPC5	100	97.120	Equus_caballus
ENSPCOG00000000676	PABPC5	100	96.859	ENSFCAG00000004998	PABPC5	100	96.859	Felis_catus
ENSPCOG00000000676	PABPC5	100	95.812	ENSFDAG00000000126	PABPC5	100	95.812	Fukomys_damarensis
ENSPCOG00000000676	PABPC5	99	97.375	ENSGGOG00000007622	PABPC5	99	97.375	Gorilla_gorilla
ENSPCOG00000000676	PABPC5	95	96.330	ENSJJAG00000011960	Pabpc5	100	96.330	Jaculus_jaculus
ENSPCOG00000000676	PABPC5	99	97.113	ENSMFAG00000024561	PABPC5	99	97.113	Macaca_fascicularis
ENSPCOG00000000676	PABPC5	99	97.113	ENSMMUG00000011562	PABPC5	99	97.113	Macaca_mulatta
ENSPCOG00000000676	PABPC5	99	97.113	ENSMNEG00000037604	PABPC5	99	97.113	Macaca_nemestrina
ENSPCOG00000000676	PABPC5	99	97.113	ENSMLEG00000028318	PABPC5	99	97.113	Mandrillus_leucophaeus
ENSPCOG00000000676	PABPC5	100	98.168	ENSMICG00000041706	PABPC5	100	98.168	Microcebus_murinus
ENSPCOG00000000676	PABPC5	100	95.026	ENSMOCG00000001554	Pabpc5	100	95.026	Microtus_ochrogaster
ENSPCOG00000000676	PABPC5	99	93.684	MGP_CAROLIEiJ_G0033367	Pabpc5	99	93.684	Mus_caroli
ENSPCOG00000000676	PABPC5	99	94.211	ENSMUSG00000034732	Pabpc5	99	94.211	Mus_musculus
ENSPCOG00000000676	PABPC5	100	94.503	MGP_PahariEiJ_G0031908	Pabpc5	100	94.503	Mus_pahari
ENSPCOG00000000676	PABPC5	99	94.211	MGP_SPRETEiJ_G0034533	Pabpc5	99	94.211	Mus_spretus
ENSPCOG00000000676	PABPC5	100	96.073	ENSMPUG00000018465	PABPC5	100	96.073	Mustela_putorius_furo
ENSPCOG00000000676	PABPC5	100	95.288	ENSMLUG00000008244	PABPC5	100	95.288	Myotis_lucifugus
ENSPCOG00000000676	PABPC5	95	95.413	ENSNGAG00000004371	Pabpc5	100	95.413	Nannospalax_galili
ENSPCOG00000000676	PABPC5	99	97.375	ENSNLEG00000035086	PABPC5	99	97.375	Nomascus_leucogenys
ENSPCOG00000000676	PABPC5	98	98.190	ENSOPRG00000000856	PABPC5	100	98.190	Ochotona_princeps
ENSPCOG00000000676	PABPC5	100	97.120	ENSOCUG00000010919	PABPC5	100	97.120	Oryctolagus_cuniculus
ENSPCOG00000000676	PABPC5	100	96.597	ENSOGAG00000006882	PABPC5	100	96.597	Otolemur_garnettii
ENSPCOG00000000676	PABPC5	100	96.597	ENSOARG00000010260	PABPC5	100	96.597	Ovis_aries
ENSPCOG00000000676	PABPC5	99	97.375	ENSPPAG00000007378	PABPC5	99	97.375	Pan_paniscus
ENSPCOG00000000676	PABPC5	100	96.859	ENSPPRG00000010742	PABPC5	100	96.859	Panthera_pardus
ENSPCOG00000000676	PABPC5	100	96.859	ENSPTIG00000001480	PABPC5	100	96.859	Panthera_tigris_altaica
ENSPCOG00000000676	PABPC5	99	97.375	ENSPTRG00000022078	PABPC5	99	97.375	Pan_troglodytes
ENSPCOG00000000676	PABPC5	99	97.113	ENSPANG00000018282	PABPC5	99	97.113	Papio_anubis
ENSPCOG00000000676	PABPC5	100	94.241	ENSPEMG00000000171	Pabpc5	100	94.241	Peromyscus_maniculatus_bairdii
ENSPCOG00000000676	PABPC5	99	97.375	ENSPPYG00000020526	PABPC5	99	97.375	Pongo_abelii
ENSPCOG00000000676	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSPCOG00000000676	PABPC5	100	96.859	ENSPVAG00000006465	PABPC5	100	96.859	Pteropus_vampyrus
ENSPCOG00000000676	PABPC5	100	94.241	ENSRNOG00000003354	Pabpc5	100	94.241	Rattus_norvegicus
ENSPCOG00000000676	PABPC5	99	97.113	ENSRBIG00000011760	PABPC5	99	97.113	Rhinopithecus_bieti
ENSPCOG00000000676	PABPC5	99	97.113	ENSRROG00000036708	PABPC5	99	97.113	Rhinopithecus_roxellana
ENSPCOG00000000676	PABPC5	99	97.113	ENSSBOG00000008658	PABPC5	99	97.113	Saimiri_boliviensis_boliviensis
ENSPCOG00000000676	PABPC5	100	93.717	ENSSARG00000014012	PABPC5	100	93.717	Sorex_araneus
ENSPCOG00000000676	PABPC5	100	96.335	ENSSSCG00000040194	PABPC5	100	96.335	Sus_scrofa
ENSPCOG00000000676	PABPC5	100	97.644	ENSTBEG00000016482	PABPC5	100	97.644	Tupaia_belangeri
ENSPCOG00000000676	PABPC5	100	96.597	ENSUAMG00000013627	PABPC5	100	96.597	Ursus_americanus
ENSPCOG00000000676	PABPC5	100	96.335	ENSUMAG00000023934	PABPC5	100	96.335	Ursus_maritimus
ENSPCOG00000000676	PABPC5	100	96.597	ENSVPAG00000001063	PABPC5	100	96.597	Vicugna_pacos
ENSPCOG00000000676	PABPC5	100	96.859	ENSVVUG00000013172	PABPC5	100	96.859	Vulpes_vulpes