EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000001089 (Gene tree)
Gene ID: 105816583
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 155956 bases
Position: chrKQ023491.1:1243426-1399381
Accession: 105816583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000000445	ResIII	PF04851.15	1.5e-08	1	1
ENSPCOP00000000441	ResIII	PF04851.15	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000001415	CHD6-202	1641	-	ENSPCOP00000000445	546 (aa)	-	A0A2K6EFE4
ENSPCOT00000001390	CHD6-201	10037	XM_012652065	ENSPCOP00000000441	2713 (aa)	XP_012507519	A0A2K6EFD7

Gene Model

Click here to download ENSPCOG00000001089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000001089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000001089	CHD6	99	71.043	ENSPCOG00000014628	CHD8	63	62.291
ENSPCOG00000001089	CHD6	75	36.905	ENSPCOG00000020722	SMARCA1	72	39.170
ENSPCOG00000001089	CHD6	99	72.894	ENSPCOG00000013850	CHD7	71	65.576
ENSPCOG00000001089	CHD6	99	71.743	ENSPCOG00000028433	CHD9	90	46.711
ENSPCOG00000001089	CHD6	68	36.242	ENSPCOG00000023985	HELLS	83	38.347
ENSPCOG00000001089	CHD6	82	40.812	ENSPCOG00000028084	-	52	35.193
ENSPCOG00000001089	CHD6	72	41.162	ENSPCOG00000026744	SMARCA5	54	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000001089	CHD6	99	93.771	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSPCOG00000001089	CHD6	99	82.418	ENSAPOG00000013736	chd6	67	72.229	Acanthochromis_polyacanthus
ENSPCOG00000001089	CHD6	99	93.211	ENSAMEG00000009496	CHD6	99	91.863	Ailuropoda_melanoleuca
ENSPCOG00000001089	CHD6	99	82.051	ENSATEG00000005608	chd6	62	77.113	Anabas_testudineus
ENSPCOG00000001089	CHD6	99	89.358	ENSAPLG00000015592	CHD6	100	72.620	Anas_platyrhynchos
ENSPCOG00000001089	CHD6	99	80.741	ENSACAG00000006842	CHD6	99	67.185	Anolis_carolinensis
ENSPCOG00000001089	CHD6	100	99.634	ENSANAG00000037548	CHD6	100	99.634	Aotus_nancymaae
ENSPCOG00000001089	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	69.697	Astyanax_mexicanus
ENSPCOG00000001089	CHD6	99	93.028	ENSBTAG00000005733	CHD6	100	88.428	Bos_taurus
ENSPCOG00000001089	CHD6	100	99.451	ENSCJAG00000017920	CHD6	100	99.451	Callithrix_jacchus
ENSPCOG00000001089	CHD6	99	93.211	ENSCAFG00000009236	CHD6	99	91.679	Canis_familiaris
ENSPCOG00000001089	CHD6	100	97.985	ENSCAFG00020012906	CHD6	100	97.985	Canis_lupus_dingo
ENSPCOG00000001089	CHD6	99	93.394	ENSCHIG00000017606	CHD6	100	88.281	Capra_hircus
ENSPCOG00000001089	CHD6	84	92.612	ENSTSYG00000014635	CHD6	99	92.612	Carlito_syrichta
ENSPCOG00000001089	CHD6	99	93.211	ENSCPOG00000015641	CHD6	99	91.605	Cavia_porcellus
ENSPCOG00000001089	CHD6	100	99.634	ENSCCAG00000036828	CHD6	100	99.634	Cebus_capucinus
ENSPCOG00000001089	CHD6	100	99.634	ENSCATG00000039248	CHD6	100	99.634	Cercocebus_atys
ENSPCOG00000001089	CHD6	99	93.028	ENSCLAG00000013743	CHD6	99	91.367	Chinchilla_lanigera
ENSPCOG00000001089	CHD6	99	93.623	ENSCSAG00000013997	CHD6	99	93.623	Chlorocebus_sabaeus
ENSPCOG00000001089	CHD6	99	86.972	ENSCHOG00000012647	CHD6	95	89.987	Choloepus_hoffmanni
ENSPCOG00000001089	CHD6	99	89.358	ENSCPBG00000019382	CHD6	100	73.736	Chrysemys_picta_bellii
ENSPCOG00000001089	CHD6	100	99.634	ENSCANG00000043435	CHD6	100	99.634	Colobus_angolensis_palliatus
ENSPCOG00000001089	CHD6	99	91.376	ENSCGRG00001002694	Chd6	99	89.543	Cricetulus_griseus_chok1gshd
ENSPCOG00000001089	CHD6	100	97.436	ENSCGRG00000006749	-	100	97.436	Cricetulus_griseus_crigri
ENSPCOG00000001089	CHD6	91	88.755	ENSDARG00000017244	chd6	79	73.466	Danio_rerio
ENSPCOG00000001089	CHD6	99	92.661	ENSDNOG00000004176	CHD6	99	89.956	Dasypus_novemcinctus
ENSPCOG00000001089	CHD6	100	98.352	ENSEASG00005023433	CHD6	100	98.352	Equus_asinus_asinus
ENSPCOG00000001089	CHD6	99	93.211	ENSECAG00000011761	CHD6	99	92.225	Equus_caballus
ENSPCOG00000001089	CHD6	94	85.049	ENSELUG00000012309	chd6	88	79.587	Esox_lucius
ENSPCOG00000001089	CHD6	99	93.211	ENSFCAG00000003572	CHD6	99	91.568	Felis_catus
ENSPCOG00000001089	CHD6	99	88.991	ENSFALG00000012563	CHD6	98	71.671	Ficedula_albicollis
ENSPCOG00000001089	CHD6	99	92.477	ENSFDAG00000013791	CHD6	99	91.614	Fukomys_damarensis
ENSPCOG00000001089	CHD6	89	83.197	ENSGMOG00000011715	chd6	82	70.671	Gadus_morhua
ENSPCOG00000001089	CHD6	94	80.426	ENSGACG00000000037	chd6	86	69.784	Gasterosteus_aculeatus
ENSPCOG00000001089	CHD6	61	94.012	ENSGAGG00000007475	-	79	94.169	Gopherus_agassizii
ENSPCOG00000001089	CHD6	100	99.634	ENSGGOG00000013123	CHD6	100	99.634	Gorilla_gorilla
ENSPCOG00000001089	CHD6	99	81.319	ENSHBUG00000014701	chd6	62	76.944	Haplochromis_burtoni
ENSPCOG00000001089	CHD6	99	92.661	ENSHGLG00000004548	CHD6	99	91.903	Heterocephalus_glaber_female
ENSPCOG00000001089	CHD6	99	92.661	ENSHGLG00100006401	CHD6	99	91.903	Heterocephalus_glaber_male
ENSPCOG00000001089	CHD6	94	85.437	ENSIPUG00000003692	chd6	74	76.592	Ictalurus_punctatus
ENSPCOG00000001089	CHD6	99	93.211	ENSSTOG00000013382	CHD6	99	92.047	Ictidomys_tridecemlineatus
ENSPCOG00000001089	CHD6	99	84.404	ENSLACG00000010881	CHD6	87	75.823	Latimeria_chalumnae
ENSPCOG00000001089	CHD6	94	86.796	ENSLOCG00000007386	chd6	82	75.725	Lepisosteus_oculatus
ENSPCOG00000001089	CHD6	99	92.844	ENSLAFG00000012144	CHD6	99	92.053	Loxodonta_africana
ENSPCOG00000001089	CHD6	100	99.634	ENSMFAG00000032830	CHD6	100	99.634	Macaca_fascicularis
ENSPCOG00000001089	CHD6	100	99.634	ENSMMUG00000020458	CHD6	100	99.634	Macaca_mulatta
ENSPCOG00000001089	CHD6	100	99.634	ENSMNEG00000040847	CHD6	100	99.634	Macaca_nemestrina
ENSPCOG00000001089	CHD6	100	99.634	ENSMLEG00000031965	CHD6	100	99.634	Mandrillus_leucophaeus
ENSPCOG00000001089	CHD6	99	81.685	ENSMAMG00000013111	chd6	63	75.501	Mastacembelus_armatus
ENSPCOG00000001089	CHD6	99	88.828	ENSMGAG00000001121	CHD6	100	72.308	Meleagris_gallopavo
ENSPCOG00000001089	CHD6	100	99.451	ENSMICG00000016641	CHD6	100	99.451	Microcebus_murinus
ENSPCOG00000001089	CHD6	99	91.560	ENSMOCG00000014004	-	97	94.671	Microtus_ochrogaster
ENSPCOG00000001089	CHD6	99	91.560	ENSMODG00000000720	-	99	80.820	Monodelphis_domestica
ENSPCOG00000001089	CHD6	99	91.009	MGP_CAROLIEiJ_G0024604	Chd6	100	94.852	Mus_caroli
ENSPCOG00000001089	CHD6	99	91.009	ENSMUSG00000057133	Chd6	100	94.768	Mus_musculus
ENSPCOG00000001089	CHD6	99	91.193	MGP_PahariEiJ_G0026048	Chd6	100	95.190	Mus_pahari
ENSPCOG00000001089	CHD6	99	91.009	MGP_SPRETEiJ_G0025526	Chd6	100	94.852	Mus_spretus
ENSPCOG00000001089	CHD6	99	93.211	ENSMPUG00000017695	CHD6	99	90.599	Mustela_putorius_furo
ENSPCOG00000001089	CHD6	99	92.844	ENSMLUG00000016247	CHD6	99	90.832	Myotis_lucifugus
ENSPCOG00000001089	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	72.183	Neolamprologus_brichardi
ENSPCOG00000001089	CHD6	99	91.786	ENSNLEG00000006496	CHD6	99	92.191	Nomascus_leucogenys
ENSPCOG00000001089	CHD6	99	87.850	ENSOPRG00000013376	-	99	87.850	Ochotona_princeps
ENSPCOG00000001089	CHD6	99	81.502	ENSONIG00000000393	chd6	84	74.377	Oreochromis_niloticus
ENSPCOG00000001089	CHD6	99	89.358	ENSOANG00000014347	CHD6	99	70.260	Ornithorhynchus_anatinus
ENSPCOG00000001089	CHD6	99	93.394	ENSOCUG00000012394	CHD6	99	89.978	Oryctolagus_cuniculus
ENSPCOG00000001089	CHD6	96	84.381	ENSORLG00020021891	chd6	99	84.381	Oryzias_latipes_hni
ENSPCOG00000001089	CHD6	99	93.766	ENSOGAG00000002427	CHD6	99	93.545	Otolemur_garnettii
ENSPCOG00000001089	CHD6	99	93.394	ENSOARG00000002597	CHD6	99	86.046	Ovis_aries
ENSPCOG00000001089	CHD6	99	93.211	ENSPPRG00000014756	CHD6	99	91.642	Panthera_pardus
ENSPCOG00000001089	CHD6	99	93.211	ENSPTIG00000011094	CHD6	99	91.532	Panthera_tigris_altaica
ENSPCOG00000001089	CHD6	100	99.634	ENSPTRG00000013504	CHD6	99	99.634	Pan_troglodytes
ENSPCOG00000001089	CHD6	100	99.451	ENSPANG00000025554	CHD6	100	99.451	Papio_anubis
ENSPCOG00000001089	CHD6	94	86.796	ENSPKIG00000005578	chd6	79	72.716	Paramormyrops_kingsleyae
ENSPCOG00000001089	CHD6	99	82.202	ENSPMGG00000014877	chd6	88	76.671	Periophthalmus_magnuspinnatus
ENSPCOG00000001089	CHD6	100	97.070	ENSPEMG00000014672	-	100	97.070	Peromyscus_maniculatus_bairdii
ENSPCOG00000001089	CHD6	99	91.560	ENSPCIG00000028037	CHD6	99	80.389	Phascolarctos_cinereus
ENSPCOG00000001089	CHD6	99	81.319	ENSPLAG00000003128	chd6	68	73.089	Poecilia_latipinna
ENSPCOG00000001089	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSPCOG00000001089	CHD6	99	93.736	ENSPPYG00000011016	CHD6	99	93.736	Pongo_abelii
ENSPCOG00000001089	CHD6	99	81.319	ENSPNYG00000022516	chd6	75	78.050	Pundamilia_nyererei
ENSPCOG00000001089	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.524	Pygocentrus_nattereri
ENSPCOG00000001089	CHD6	99	90.826	ENSRNOG00000016744	Chd6	99	88.027	Rattus_norvegicus
ENSPCOG00000001089	CHD6	100	99.634	ENSSBOG00000022089	CHD6	99	99.634	Saimiri_boliviensis_boliviensis
ENSPCOG00000001089	CHD6	99	91.376	ENSSHAG00000017072	CHD6	99	80.242	Sarcophilus_harrisii
ENSPCOG00000001089	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	72.904	Scleropages_formosus
ENSPCOG00000001089	CHD6	84	99.563	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSPCOG00000001089	CHD6	99	93.211	ENSSSCG00000007360	CHD6	100	91.368	Sus_scrofa
ENSPCOG00000001089	CHD6	99	89.174	ENSTGUG00000003179	CHD6	99	73.760	Taeniopygia_guttata
ENSPCOG00000001089	CHD6	99	80.220	ENSTNIG00000017487	chd6	83	75.503	Tetraodon_nigroviridis
ENSPCOG00000001089	CHD6	99	91.193	ENSTTRG00000013438	CHD6	99	88.350	Tursiops_truncatus
ENSPCOG00000001089	CHD6	100	97.985	ENSUAMG00000024036	CHD6	100	97.985	Ursus_americanus
ENSPCOG00000001089	CHD6	100	97.985	ENSUMAG00000002017	CHD6	100	97.985	Ursus_maritimus
ENSPCOG00000001089	CHD6	98	88.037	ENSVPAG00000007941	CHD6	93	90.995	Vicugna_pacos
ENSPCOG00000001089	CHD6	99	93.211	ENSVVUG00000029164	CHD6	99	91.679	Vulpes_vulpes
ENSPCOG00000001089	CHD6	99	64.037	ENSXETG00000021445	chd6	90	71.016	Xenopus_tropicalis