EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCOG00000001799 (Gene tree)
Gene ID
105817355
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Propithecus_coquereli
Status
putative
Strand
Plus strand
Length
57308 bases
Position
chrKQ023836.1:713815-771122
Accession
105817355
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCOP00000000581tRNA_anti-codonPF01336.256.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCOT00000001977RPA1-2012873XM_012653019ENSPCOP00000000581616 (aa)XP_012508473A0A2K6EFR3
Gene Model
Click here to download ENSPCOG00000001799's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000001799's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCOG00000001799RPA19962.193ENSAPOG00000011658rpa19962.912Acanthochromis_polyacanthus
ENSPCOG00000001799RPA19162.443ENSAPOG00000019409RPA18562.443Acanthochromis_polyacanthus
ENSPCOG00000001799RPA19991.790ENSAMEG00000007706RPA19891.790Ailuropoda_melanoleuca
ENSPCOG00000001799RPA19558.092ENSACIG00000007277rpa19958.092Amphilophus_citrinellus
ENSPCOG00000001799RPA19558.644ENSACIG00000012881RPA19958.644Amphilophus_citrinellus
ENSPCOG00000001799RPA19955.162ENSAOCG00000009003RPA19955.162Amphiprion_ocellaris
ENSPCOG00000001799RPA19962.866ENSAOCG00000023376rpa19963.621Amphiprion_ocellaris
ENSPCOG00000001799RPA19963.029ENSAPEG00000008634rpa19963.793Amphiprion_percula
ENSPCOG00000001799RPA19953.916ENSAPEG00000019132RPA19954.367Amphiprion_percula
ENSPCOG00000001799RPA19463.966ENSATEG00000022024rpa19963.966Anabas_testudineus
ENSPCOG00000001799RPA19954.601ENSATEG00000006443RPA19954.601Anabas_testudineus
ENSPCOG00000001799RPA19865.288ENSAPLG00000012442RPA110065.288Anas_platyrhynchos
ENSPCOG00000001799RPA19962.520ENSACAG00000014490RPA19963.328Anolis_carolinensis
ENSPCOG00000001799RPA19891.542ENSANAG00000023456RPA110091.542Aotus_nancymaae
ENSPCOG00000001799RPA19364.510ENSACLG00000006640rpa19964.510Astatotilapia_calliptera
ENSPCOG00000001799RPA19957.457ENSACLG00000005223RPA19957.457Astatotilapia_calliptera
ENSPCOG00000001799RPA19961.438ENSAMXG00000008418rpa19961.438Astyanax_mexicanus
ENSPCOG00000001799RPA110091.558ENSBTAG00000009711RPA110091.558Bos_taurus
ENSPCOG00000001799RPA110091.396ENSCJAG00000001848RPA110091.396Callithrix_jacchus
ENSPCOG00000001799RPA110092.045ENSCAFG00000019249RPA110092.045Canis_familiaris
ENSPCOG00000001799RPA110092.045ENSCAFG00020009847RPA110092.045Canis_lupus_dingo
ENSPCOG00000001799RPA110091.721ENSCHIG00000026308RPA110091.721Capra_hircus
ENSPCOG00000001799RPA110092.058ENSTSYG00000003482-10092.058Carlito_syrichta
ENSPCOG00000001799RPA110088.312ENSCPOG00000000035RPA110088.312Cavia_porcellus
ENSPCOG00000001799RPA110080.452ENSCCAG00000010981RPA110080.452Cebus_capucinus
ENSPCOG00000001799RPA110084.253ENSCLAG00000015045-10084.253Chinchilla_lanigera
ENSPCOG00000001799RPA19989.414ENSCLAG00000005185-9989.414Chinchilla_lanigera
ENSPCOG00000001799RPA110078.998ENSCSAG00000013833RPA110079.677Chlorocebus_sabaeus
ENSPCOG00000001799RPA19588.265ENSCHOG00000013540-10088.265Choloepus_hoffmanni
ENSPCOG00000001799RPA17192.711ENSCHOG00000009454-10092.711Choloepus_hoffmanni
ENSPCOG00000001799RPA19977.073ENSCPBG00000020377RPA19977.719Chrysemys_picta_bellii
ENSPCOG00000001799RPA19941.491ENSCING00000023482-9841.491Ciona_intestinalis
ENSPCOG00000001799RPA19887.438ENSCANG00000030911RPA110087.438Colobus_angolensis_palliatus
ENSPCOG00000001799RPA19989.644ENSCGRG00001008197Rpa19989.644Cricetulus_griseus_chok1gshd
ENSPCOG00000001799RPA18188.757ENSCGRG00000000582Rpa19988.757Cricetulus_griseus_crigri
ENSPCOG00000001799RPA19961.111ENSCSEG00000013066rpa19961.111Cynoglossus_semilaevis
ENSPCOG00000001799RPA19951.752ENSCSEG00000012726RPA19853.608Cynoglossus_semilaevis
ENSPCOG00000001799RPA19963.132ENSCVAG00000019431rpa19964.851Cyprinodon_variegatus
ENSPCOG00000001799RPA19652.696ENSCVAG00000013446-9652.696Cyprinodon_variegatus
ENSPCOG00000001799RPA19963.235ENSDARG00000003938rpa19963.235Danio_rerio
ENSPCOG00000001799RPA19991.598ENSDNOG00000017218RPA19991.598Dasypus_novemcinctus
ENSPCOG00000001799RPA110090.422ENSDORG00000006199Rpa110090.422Dipodomys_ordii
ENSPCOG00000001799RPA19942.055FBgn0010173RpA-709842.697Drosophila_melanogaster
ENSPCOG00000001799RPA18385.749ENSETEG00000017608RPA18285.749Echinops_telfairi
ENSPCOG00000001799RPA19893.189ENSEASG00005009372RPA110090.792Equus_asinus_asinus
ENSPCOG00000001799RPA110093.182ENSECAG00000023886RPA110093.182Equus_caballus
ENSPCOG00000001799RPA16891.190ENSEEUG00000002186-6891.190Erinaceus_europaeus
ENSPCOG00000001799RPA19961.501ENSELUG00000021071rpa19961.664Esox_lucius
ENSPCOG00000001799RPA18856.538ENSELUG00000006136RPA19956.538Esox_lucius
ENSPCOG00000001799RPA110089.465ENSFCAG00000006306RPA19989.465Felis_catus
ENSPCOG00000001799RPA110074.152ENSFALG00000006575RPA19974.152Ficedula_albicollis
ENSPCOG00000001799RPA19989.251ENSFDAG00000007720RPA19989.251Fukomys_damarensis
ENSPCOG00000001799RPA19961.047ENSFHEG00000003580rpa19961.047Fundulus_heteroclitus
ENSPCOG00000001799RPA19959.314ENSGMOG00000010382rpa19959.314Gadus_morhua
ENSPCOG00000001799RPA110074.068ENSGALG00000003072RPA19974.068Gallus_gallus
ENSPCOG00000001799RPA19962.295ENSGAFG00000012916rpa19962.295Gambusia_affinis
ENSPCOG00000001799RPA19954.255ENSGAFG00000020953RPA19954.255Gambusia_affinis
ENSPCOG00000001799RPA19961.928ENSGACG00000010856rpa19961.928Gasterosteus_aculeatus
ENSPCOG00000001799RPA19977.073ENSGAGG00000013611RPA19977.073Gopherus_agassizii
ENSPCOG00000001799RPA110087.987ENSGGOG00000014186RPA110087.987Gorilla_gorilla
ENSPCOG00000001799RPA19654.104ENSHBUG00000009348RPA19954.104Haplochromis_burtoni
ENSPCOG00000001799RPA19963.235ENSHBUG00000017773rpa19963.235Haplochromis_burtoni
ENSPCOG00000001799RPA19989.902ENSHGLG00000008846RPA110089.902Heterocephalus_glaber_female
ENSPCOG00000001799RPA110077.273ENSHGLG00100002005-10077.273Heterocephalus_glaber_male
ENSPCOG00000001799RPA19989.902ENSHGLG00100017755-10089.902Heterocephalus_glaber_male
ENSPCOG00000001799RPA110084.740ENSHGLG00100000799-10084.740Heterocephalus_glaber_male
ENSPCOG00000001799RPA19944.426ENSHCOG00000000351RPA19944.426Hippocampus_comes
ENSPCOG00000001799RPA19961.463ENSHCOG00000001401rpa19961.712Hippocampus_comes
ENSPCOG00000001799RPA19962.036ENSIPUG00000004400rpa19962.036Ictalurus_punctatus
ENSPCOG00000001799RPA19884.375ENSSTOG00000022475RPA19884.375Ictidomys_tridecemlineatus
ENSPCOG00000001799RPA19590.646ENSJJAG00000000876Rpa19890.646Jaculus_jaculus
ENSPCOG00000001799RPA19962.153ENSKMAG00000005605rpa19962.480Kryptolebias_marmoratus
ENSPCOG00000001799RPA19953.409ENSKMAG00000000234RPA19953.409Kryptolebias_marmoratus
ENSPCOG00000001799RPA19958.763ENSLBEG00000002281RPA19258.763Labrus_bergylta
ENSPCOG00000001799RPA19962.357ENSLBEG00000021604rpa19962.357Labrus_bergylta
ENSPCOG00000001799RPA18067.203ENSLACG00000007210RPA19967.203Latimeria_chalumnae
ENSPCOG00000001799RPA19967.427ENSLOCG00000006397rpa19967.427Lepisosteus_oculatus
ENSPCOG00000001799RPA19988.710ENSLAFG00000015354RPA19988.710Loxodonta_africana
ENSPCOG00000001799RPA18291.304ENSMFAG00000036138-10092.110Macaca_fascicularis
ENSPCOG00000001799RPA110084.740ENSMMUG00000002442-10084.740Macaca_mulatta
ENSPCOG00000001799RPA19890.909ENSMMUG00000011604-10091.584Macaca_mulatta
ENSPCOG00000001799RPA110075.728ENSMNEG00000029837-10075.728Macaca_nemestrina
ENSPCOG00000001799RPA110087.500ENSMNEG00000031632-10088.169Macaca_nemestrina
ENSPCOG00000001799RPA19884.983ENSMLEG00000038768-10085.667Mandrillus_leucophaeus
ENSPCOG00000001799RPA19952.303ENSMAMG00000020097RPA19951.786Mastacembelus_armatus
ENSPCOG00000001799RPA19963.562ENSMAMG00000017993rpa19963.605Mastacembelus_armatus
ENSPCOG00000001799RPA19963.235ENSMZEG00005007551rpa19963.235Maylandia_zebra
ENSPCOG00000001799RPA19957.457ENSMZEG00005024731RPA19957.457Maylandia_zebra
ENSPCOG00000001799RPA19973.770ENSMGAG00000005315RPA19873.770Meleagris_gallopavo
ENSPCOG00000001799RPA19791.000ENSMAUG00000010474Rpa19991.000Mesocricetus_auratus
ENSPCOG00000001799RPA110097.565ENSMICG00000012867RPA110097.565Microcebus_murinus
ENSPCOG00000001799RPA19988.418ENSMOCG00000013019Rpa19988.418Microtus_ochrogaster
ENSPCOG00000001799RPA19961.111ENSMMOG00000014292rpa19962.542Mola_mola
ENSPCOG00000001799RPA19756.784ENSMMOG00000010868RPA19759.735Mola_mola
ENSPCOG00000001799RPA19984.202ENSMODG00000010549RPA19984.202Monodelphis_domestica
ENSPCOG00000001799RPA19958.130ENSMALG00000001208RPA18958.130Monopterus_albus
ENSPCOG00000001799RPA19964.111ENSMALG00000011453rpa19964.274Monopterus_albus
ENSPCOG00000001799RPA19988.149MGP_CAROLIEiJ_G0016734Rpa19988.149Mus_caroli
ENSPCOG00000001799RPA19985.852ENSMUSG00000000751Rpa19985.852Mus_musculus
ENSPCOG00000001799RPA19989.338MGP_PahariEiJ_G0017871Rpa19989.338Mus_pahari
ENSPCOG00000001799RPA19985.875MGP_SPRETEiJ_G0017577Rpa19985.875Mus_spretus
ENSPCOG00000001799RPA110090.584ENSMPUG00000013119RPA110090.584Mustela_putorius_furo
ENSPCOG00000001799RPA110088.245ENSMLUG00000006113RPA110088.245Myotis_lucifugus
ENSPCOG00000001799RPA19588.964ENSNGAG00000004522Rpa19488.964Nannospalax_galili
ENSPCOG00000001799RPA19464.298ENSNBRG00000020595rpa19964.298Neolamprologus_brichardi
ENSPCOG00000001799RPA19656.345ENSNBRG00000009672RPA19556.345Neolamprologus_brichardi
ENSPCOG00000001799RPA110090.260ENSNLEG00000017149RPA110090.762Nomascus_leucogenys
ENSPCOG00000001799RPA19873.179ENSMEUG00000006714RPA19973.179Notamacropus_eugenii
ENSPCOG00000001799RPA19586.600ENSODEG00000009038RPA19686.600Octodon_degus
ENSPCOG00000001799RPA19963.387ENSONIG00000013135rpa19963.387Oreochromis_niloticus
ENSPCOG00000001799RPA19883.250ENSOANG00000010880RPA19983.416Ornithorhynchus_anatinus
ENSPCOG00000001799RPA110086.997ENSOCUG00000001504RPA110086.997Oryctolagus_cuniculus
ENSPCOG00000001799RPA19963.666ENSORLG00000004856rpa19963.666Oryzias_latipes
ENSPCOG00000001799RPA19953.354ENSORLG00000003368RPA19953.354Oryzias_latipes
ENSPCOG00000001799RPA19951.946ENSORLG00020015284RPA19951.946Oryzias_latipes_hni
ENSPCOG00000001799RPA19963.830ENSORLG00020008980rpa19963.830Oryzias_latipes_hni
ENSPCOG00000001799RPA19963.830ENSORLG00015013982rpa19963.830Oryzias_latipes_hsok
ENSPCOG00000001799RPA16761.353ENSORLG00015005867-9461.353Oryzias_latipes_hsok
ENSPCOG00000001799RPA19953.727ENSORLG00015020383RPA19953.727Oryzias_latipes_hsok
ENSPCOG00000001799RPA19457.804ENSOMEG00000011040RPA19957.804Oryzias_melastigma
ENSPCOG00000001799RPA19961.626ENSOMEG00000004704rpa110061.626Oryzias_melastigma
ENSPCOG00000001799RPA19490.175ENSOGAG00000029379-10090.175Otolemur_garnettii
ENSPCOG00000001799RPA110092.695ENSOGAG00000005581-10092.695Otolemur_garnettii
ENSPCOG00000001799RPA110091.558ENSOARG00000014479RPA110091.558Ovis_aries
ENSPCOG00000001799RPA110090.584ENSPPAG00000039680RPA110091.086Pan_paniscus
ENSPCOG00000001799RPA110089.303ENSPPRG00000011807RPA19989.303Panthera_pardus
ENSPCOG00000001799RPA110089.141ENSPTIG00000007898RPA19989.141Panthera_tigris_altaica
ENSPCOG00000001799RPA110090.584ENSPTRG00000008539RPA110091.086Pan_troglodytes
ENSPCOG00000001799RPA110090.747ENSPANG00000024592RPA110091.410Papio_anubis
ENSPCOG00000001799RPA19462.607ENSPKIG00000008053rpa19462.950Paramormyrops_kingsleyae
ENSPCOG00000001799RPA19776.500ENSPSIG00000015617RPA19976.500Pelodiscus_sinensis
ENSPCOG00000001799RPA19953.698ENSPMGG00000000543RPA19956.743Periophthalmus_magnuspinnatus
ENSPCOG00000001799RPA19861.730ENSPMGG00000011589rpa19961.897Periophthalmus_magnuspinnatus
ENSPCOG00000001799RPA19990.212ENSPEMG00000021061Rpa19990.212Peromyscus_maniculatus_bairdii
ENSPCOG00000001799RPA110082.172ENSPCIG00000019049RPA19982.334Phascolarctos_cinereus
ENSPCOG00000001799RPA19962.745ENSPFOG00000003987rpa19962.745Poecilia_formosa
ENSPCOG00000001799RPA19454.106ENSPLAG00000008844-9754.106Poecilia_latipinna
ENSPCOG00000001799RPA19962.582ENSPLAG00000004984rpa19962.582Poecilia_latipinna
ENSPCOG00000001799RPA19962.745ENSPMEG00000020602rpa19963.415Poecilia_mexicana
ENSPCOG00000001799RPA19454.106ENSPMEG00000003627-9754.106Poecilia_mexicana
ENSPCOG00000001799RPA19455.461ENSPREG00000010174rpa19655.461Poecilia_reticulata
ENSPCOG00000001799RPA19952.593ENSPREG00000010119RPA110052.012Poecilia_reticulata
ENSPCOG00000001799RPA110091.396ENSPVAG00000002149RPA110091.396Pteropus_vampyrus
ENSPCOG00000001799RPA19957.143ENSPNYG00000024165RPA19957.143Pundamilia_nyererei
ENSPCOG00000001799RPA19963.399ENSPNYG00000016316rpa19964.460Pundamilia_nyererei
ENSPCOG00000001799RPA19854.485ENSPNAG00000008599rpa19952.251Pygocentrus_nattereri
ENSPCOG00000001799RPA19989.233ENSRNOG00000003123Rpa19989.233Rattus_norvegicus
ENSPCOG00000001799RPA110090.762ENSRBIG00000036587RPA110090.762Rhinopithecus_bieti
ENSPCOG00000001799RPA110085.251ENSRROG00000043278RPA110085.251Rhinopithecus_roxellana
ENSPCOG00000001799RPA19731.424YAR007CRFA19731.424Saccharomyces_cerevisiae
ENSPCOG00000001799RPA19887.583ENSSBOG00000030233RPA19987.583Saimiri_boliviensis_boliviensis
ENSPCOG00000001799RPA19983.934ENSSHAG00000007969RPA19884.262Sarcophilus_harrisii
ENSPCOG00000001799RPA19965.147ENSSFOG00015005362rpa19265.147Scleropages_formosus
ENSPCOG00000001799RPA19952.115ENSSMAG00000019746RPA19952.115Scophthalmus_maximus
ENSPCOG00000001799RPA19963.889ENSSDUG00000011949rpa19963.889Seriola_dumerili
ENSPCOG00000001799RPA18965.349ENSSDUG00000016358RPA18664.920Seriola_dumerili
ENSPCOG00000001799RPA19963.889ENSSLDG00000011806rpa19963.889Seriola_lalandi_dorsalis
ENSPCOG00000001799RPA18965.197ENSSLDG00000020784RPA18564.920Seriola_lalandi_dorsalis
ENSPCOG00000001799RPA18882.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSPCOG00000001799RPA19772.483ENSSPUG00000007223RPA19972.483Sphenodon_punctatus
ENSPCOG00000001799RPA19658.376ENSSPAG00000011165RPA19758.376Stegastes_partitus
ENSPCOG00000001799RPA19963.072ENSSPAG00000009903rpa19963.072Stegastes_partitus
ENSPCOG00000001799RPA19890.713ENSSSCG00000017822RPA110090.713Sus_scrofa
ENSPCOG00000001799RPA110073.906ENSTGUG00000005775RPA19973.906Taeniopygia_guttata
ENSPCOG00000001799RPA19963.666ENSTRUG00000003616rpa19963.666Takifugu_rubripes
ENSPCOG00000001799RPA19954.511ENSTRUG00000000405RPA18557.778Takifugu_rubripes
ENSPCOG00000001799RPA19964.286ENSTNIG00000016199rpa19964.390Tetraodon_nigroviridis
ENSPCOG00000001799RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSPCOG00000001799RPA19990.554ENSTTRG00000001169RPA19990.554Tursiops_truncatus
ENSPCOG00000001799RPA18896.154ENSUAMG00000015676RPA19796.154Ursus_americanus
ENSPCOG00000001799RPA110092.208ENSUMAG00000009328RPA110092.208Ursus_maritimus
ENSPCOG00000001799RPA110089.286ENSVPAG00000009443RPA110089.286Vicugna_pacos
ENSPCOG00000001799RPA110092.208ENSVVUG00000021715RPA110092.208Vulpes_vulpes
ENSPCOG00000001799RPA19973.520ENSXETG00000013538rpa19874.056Xenopus_tropicalis
ENSPCOG00000001799RPA19360.348ENSXCOG00000010068rpa19461.511Xiphophorus_couchianus
ENSPCOG00000001799RPA19556.261ENSXCOG00000009899-9956.261Xiphophorus_couchianus
ENSPCOG00000001799RPA19961.275ENSXMAG00000004102rpa19962.917Xiphophorus_maculatus
ENSPCOG00000001799RPA19859.350ENSXMAG00000010333RPA19259.350Xiphophorus_maculatus

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