EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000004398 (Gene tree)
Gene ID: 105808614
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 122276 bases
Position: chrKQ021269.1:266836-389111
Accession: 105808614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	1	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	2	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	3	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	4	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	5	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	6	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	7	8
ENSPCOP00000001546	PUF	PF00806.19	1.3e-71	8	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	1	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	2	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	3	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	4	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	5	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	6	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	7	8
ENSPCOP00000001525	PUF	PF00806.19	5.4e-71	8	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	1	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	2	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	3	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	4	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	5	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	6	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	7	8
ENSPCOP00000001532	PUF	PF00806.19	1.1e-70	8	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	1	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	2	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	3	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	4	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	5	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	6	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	7	8
ENSPCOP00000001522	PUF	PF00806.19	2.5e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000005542	PUM1-206	405	-	ENSPCOP00000001555	134 (aa)	-	A0A2K6EIJ3
ENSPCOT00000005476	PUM1-201	5445	XM_012642302	ENSPCOP00000001522	1189 (aa)	XP_012497756	A0A2K6EIH6
ENSPCOT00000005490	PUM1-202	5202	XM_012642307	ENSPCOP00000001525	1108 (aa)	XP_012497761	A0A2K6EIG4
ENSPCOT00000005501	PUM1-203	5154	XM_012642309	ENSPCOP00000001532	1092 (aa)	XP_012497763	A0A2K6EII2
ENSPCOT00000005537	PUM1-205	1227	-	ENSPCOP00000001554	408 (aa)	-	A0A2K6EIK4
ENSPCOT00000005529	PUM1-204	2835	-	ENSPCOP00000001546	944 (aa)	-	A0A2K6EIJ1

Gene Model

Click here to download ENSPCOG00000004398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000004398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000004398	PUM1	85	87.354	ENSPCOG00000019636	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000004398	PUM1	100	99.757	ENSG00000134644	PUM1	100	99.664	Homo_sapiens
ENSPCOG00000004398	PUM1	90	91.325	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSPCOG00000004398	PUM1	100	99.306	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSPCOG00000004398	PUM1	100	81.188	ENSACIG00000021013	pum1	93	90.602	Amphilophus_citrinellus
ENSPCOG00000004398	PUM1	90	91.325	ENSAOCG00000003944	pum1	100	79.079	Amphiprion_ocellaris
ENSPCOG00000004398	PUM1	90	91.325	ENSAPEG00000014550	pum1	100	79.079	Amphiprion_percula
ENSPCOG00000004398	PUM1	100	91.325	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSPCOG00000004398	PUM1	100	98.551	ENSAPLG00000009351	PUM1	100	97.645	Anas_platyrhynchos
ENSPCOG00000004398	PUM1	100	98.551	ENSACAG00000000682	PUM1	98	95.627	Anolis_carolinensis
ENSPCOG00000004398	PUM1	100	99.576	ENSANAG00000027865	PUM1	100	99.576	Aotus_nancymaae
ENSPCOG00000004398	PUM1	90	76.481	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSPCOG00000004398	PUM1	100	84.615	ENSAMXG00000020607	pum1	92	92.995	Astyanax_mexicanus
ENSPCOG00000004398	PUM1	100	99.515	ENSBTAG00000018979	PUM1	100	99.517	Bos_taurus
ENSPCOG00000004398	PUM1	100	99.579	ENSCJAG00000006035	PUM1	100	99.579	Callithrix_jacchus
ENSPCOG00000004398	PUM1	100	99.306	ENSCAFG00000011205	PUM1	100	97.140	Canis_familiaris
ENSPCOG00000004398	PUM1	92	97.436	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSPCOG00000004398	PUM1	100	99.515	ENSCHIG00000012952	PUM1	100	99.278	Capra_hircus
ENSPCOG00000004398	PUM1	100	99.327	ENSTSYG00000008868	PUM1	100	99.327	Carlito_syrichta
ENSPCOG00000004398	PUM1	100	98.991	ENSCPOG00000031613	PUM1	100	98.991	Cavia_porcellus
ENSPCOG00000004398	PUM1	100	99.634	ENSCATG00000017991	PUM1	100	99.758	Cercocebus_atys
ENSPCOG00000004398	PUM1	100	99.097	ENSCLAG00000007662	PUM1	100	99.097	Chinchilla_lanigera
ENSPCOG00000004398	PUM1	100	99.306	ENSCSAG00000001028	PUM1	100	98.750	Chlorocebus_sabaeus
ENSPCOG00000004398	PUM1	99	95.977	ENSCHOG00000010245	PUM1	93	95.977	Choloepus_hoffmanni
ENSPCOG00000004398	PUM1	100	98.309	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSPCOG00000004398	PUM1	100	99.639	ENSCANG00000042606	PUM1	100	99.639	Colobus_angolensis_palliatus
ENSPCOG00000004398	PUM1	100	98.810	ENSCGRG00001024949	Pum1	100	98.810	Cricetulus_griseus_chok1gshd
ENSPCOG00000004398	PUM1	100	98.810	ENSCGRG00000014197	Pum1	100	98.810	Cricetulus_griseus_crigri
ENSPCOG00000004398	PUM1	90	75.926	ENSCSEG00000015981	pum1	100	77.521	Cynoglossus_semilaevis
ENSPCOG00000004398	PUM1	100	80.693	ENSCVAG00000007043	pum1	100	75.557	Cyprinodon_variegatus
ENSPCOG00000004398	PUM1	100	93.237	ENSDARG00000099256	pum1	95	93.750	Danio_rerio
ENSPCOG00000004398	PUM1	100	99.306	ENSDNOG00000010939	PUM1	100	98.907	Dasypus_novemcinctus
ENSPCOG00000004398	PUM1	89	98.381	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSPCOG00000004398	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSPCOG00000004398	PUM1	100	99.306	ENSEASG00005010813	PUM1	100	98.991	Equus_asinus_asinus
ENSPCOG00000004398	PUM1	100	98.991	ENSECAG00000021369	PUM1	100	98.991	Equus_caballus
ENSPCOG00000004398	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSPCOG00000004398	PUM1	100	83.354	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSPCOG00000004398	PUM1	100	99.495	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSPCOG00000004398	PUM1	100	98.551	ENSFALG00000001214	PUM1	97	96.147	Ficedula_albicollis
ENSPCOG00000004398	PUM1	100	98.991	ENSFDAG00000011319	PUM1	100	98.991	Fukomys_damarensis
ENSPCOG00000004398	PUM1	91	90.843	ENSGMOG00000010491	pum1	94	90.361	Gadus_morhua
ENSPCOG00000004398	PUM1	100	98.551	ENSGALG00000042598	PUM1	99	98.988	Gallus_gallus
ENSPCOG00000004398	PUM1	100	80.817	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSPCOG00000004398	PUM1	100	80.788	ENSGACG00000005717	pum1	100	76.277	Gasterosteus_aculeatus
ENSPCOG00000004398	PUM1	100	98.309	ENSGAGG00000001290	PUM1	99	98.785	Gopherus_agassizii
ENSPCOG00000004398	PUM1	100	99.639	ENSGGOG00000011983	PUM1	100	99.639	Gorilla_gorilla
ENSPCOG00000004398	PUM1	100	80.817	ENSHBUG00000018718	pum1	100	76.053	Haplochromis_burtoni
ENSPCOG00000004398	PUM1	100	98.823	ENSHGLG00000013819	Pum1	100	98.823	Heterocephalus_glaber_female
ENSPCOG00000004398	PUM1	100	98.823	ENSHGLG00100008621	Pum1	100	98.823	Heterocephalus_glaber_male
ENSPCOG00000004398	PUM1	100	92.271	ENSIPUG00000020421	pum1	93	92.271	Ictalurus_punctatus
ENSPCOG00000004398	PUM1	100	99.359	ENSSTOG00000010757	PUM1	100	99.359	Ictidomys_tridecemlineatus
ENSPCOG00000004398	PUM1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSPCOG00000004398	PUM1	100	80.322	ENSKMAG00000003481	pum1	94	90.361	Kryptolebias_marmoratus
ENSPCOG00000004398	PUM1	100	91.325	ENSLBEG00000002527	pum1	94	90.843	Labrus_bergylta
ENSPCOG00000004398	PUM1	100	88.724	ENSLACG00000017188	PUM1	99	86.678	Latimeria_chalumnae
ENSPCOG00000004398	PUM1	100	96.618	ENSLOCG00000005210	pum1	95	96.618	Lepisosteus_oculatus
ENSPCOG00000004398	PUM1	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSPCOG00000004398	PUM1	100	99.634	ENSMFAG00000010291	PUM1	100	99.758	Macaca_fascicularis
ENSPCOG00000004398	PUM1	100	99.639	ENSMMUG00000013520	PUM1	100	99.639	Macaca_mulatta
ENSPCOG00000004398	PUM1	100	99.639	ENSMNEG00000034639	PUM1	100	99.639	Macaca_nemestrina
ENSPCOG00000004398	PUM1	100	99.639	ENSMLEG00000038743	PUM1	100	99.639	Mandrillus_leucophaeus
ENSPCOG00000004398	PUM1	100	91.325	ENSMAMG00000011606	pum1	94	90.843	Mastacembelus_armatus
ENSPCOG00000004398	PUM1	100	80.817	ENSMZEG00005005834	pum1	100	76.053	Maylandia_zebra
ENSPCOG00000004398	PUM1	100	98.551	ENSMGAG00000000724	PUM1	100	97.561	Meleagris_gallopavo
ENSPCOG00000004398	PUM1	100	98.907	ENSMAUG00000022090	Pum1	100	98.907	Mesocricetus_auratus
ENSPCOG00000004398	PUM1	100	100.000	ENSMICG00000007713	-	100	100.000	Microcebus_murinus
ENSPCOG00000004398	PUM1	99	98.592	ENSMICG00000012213	-	100	97.383	Microcebus_murinus
ENSPCOG00000004398	PUM1	100	98.823	ENSMOCG00000015463	Pum1	100	98.823	Microtus_ochrogaster
ENSPCOG00000004398	PUM1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSPCOG00000004398	PUM1	100	97.826	ENSMODG00000017067	PUM1	100	97.649	Monodelphis_domestica
ENSPCOG00000004398	PUM1	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSPCOG00000004398	PUM1	100	99.029	MGP_CAROLIEiJ_G0026549	Pum1	100	98.570	Mus_caroli
ENSPCOG00000004398	PUM1	100	99.272	ENSMUSG00000028580	Pum1	100	98.823	Mus_musculus
ENSPCOG00000004398	PUM1	100	99.272	MGP_PahariEiJ_G0028881	Pum1	100	98.654	Mus_pahari
ENSPCOG00000004398	PUM1	100	99.272	MGP_SPRETEiJ_G0027529	Pum1	100	98.738	Mus_spretus
ENSPCOG00000004398	PUM1	100	99.306	ENSMPUG00000015454	PUM1	100	99.075	Mustela_putorius_furo
ENSPCOG00000004398	PUM1	100	99.515	ENSMLUG00000006490	PUM1	100	98.907	Myotis_lucifugus
ENSPCOG00000004398	PUM1	100	99.159	ENSNGAG00000002378	Pum1	100	99.159	Nannospalax_galili
ENSPCOG00000004398	PUM1	100	78.138	ENSNBRG00000010689	pum1	100	83.210	Neolamprologus_brichardi
ENSPCOG00000004398	PUM1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSPCOG00000004398	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSPCOG00000004398	PUM1	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSPCOG00000004398	PUM1	100	98.823	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSPCOG00000004398	PUM1	100	91.084	ENSONIG00000002290	pum1	94	90.602	Oreochromis_niloticus
ENSPCOG00000004398	PUM1	80	83.269	ENSOANG00000004902	-	100	77.528	Ornithorhynchus_anatinus
ENSPCOG00000004398	PUM1	100	99.306	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSPCOG00000004398	PUM1	100	81.931	ENSORLG00000011482	pum1	94	90.843	Oryzias_latipes
ENSPCOG00000004398	PUM1	100	82.054	ENSORLG00020019461	pum1	100	75.967	Oryzias_latipes_hni
ENSPCOG00000004398	PUM1	100	82.054	ENSORLG00015011375	pum1	100	76.049	Oryzias_latipes_hsok
ENSPCOG00000004398	PUM1	90	93.012	ENSOMEG00000009312	pum1	100	77.220	Oryzias_melastigma
ENSPCOG00000004398	PUM1	100	98.611	ENSOGAG00000011063	PUM1	100	96.809	Otolemur_garnettii
ENSPCOG00000004398	PUM1	100	99.368	ENSOARG00000001899	PUM1	100	99.368	Ovis_aries
ENSPCOG00000004398	PUM1	100	99.639	ENSPPAG00000044003	PUM1	100	99.639	Pan_paniscus
ENSPCOG00000004398	PUM1	100	99.411	ENSPPRG00000001370	PUM1	100	99.364	Panthera_pardus
ENSPCOG00000004398	PUM1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSPCOG00000004398	PUM1	100	99.639	ENSPTRG00000000453	PUM1	100	99.639	Pan_troglodytes
ENSPCOG00000004398	PUM1	100	99.579	ENSPANG00000016338	PUM1	100	99.758	Papio_anubis
ENSPCOG00000004398	PUM1	95	93.478	ENSPKIG00000010578	pum1	100	82.696	Paramormyrops_kingsleyae
ENSPCOG00000004398	PUM1	100	98.309	ENSPSIG00000014118	PUM1	100	97.813	Pelodiscus_sinensis
ENSPCOG00000004398	PUM1	100	76.507	ENSPMGG00000005836	pum1	100	81.663	Periophthalmus_magnuspinnatus
ENSPCOG00000004398	PUM1	100	98.991	ENSPEMG00000010009	Pum1	100	98.991	Peromyscus_maniculatus_bairdii
ENSPCOG00000004398	PUM1	100	97.904	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSPCOG00000004398	PUM1	94	90.843	ENSPFOG00000007289	pum1	93	90.361	Poecilia_formosa
ENSPCOG00000004398	PUM1	100	90.843	ENSPLAG00000007256	pum1	94	90.361	Poecilia_latipinna
ENSPCOG00000004398	PUM1	85	82.840	ENSPMEG00000019543	pum1	99	78.217	Poecilia_mexicana
ENSPCOG00000004398	PUM1	100	80.817	ENSPREG00000005195	pum1	100	80.848	Poecilia_reticulata
ENSPCOG00000004398	PUM1	100	99.306	ENSPPYG00000001621	PUM1	100	97.609	Pongo_abelii
ENSPCOG00000004398	PUM1	84	99.074	ENSPCAG00000001979	PUM1	74	99.074	Procavia_capensis
ENSPCOG00000004398	PUM1	100	99.306	ENSPVAG00000005207	PUM1	97	97.056	Pteropus_vampyrus
ENSPCOG00000004398	PUM1	100	80.817	ENSPNYG00000009518	pum1	100	81.205	Pundamilia_nyererei
ENSPCOG00000004398	PUM1	100	93.237	ENSPNAG00000026728	pum1	95	93.237	Pygocentrus_nattereri
ENSPCOG00000004398	PUM1	100	99.272	ENSRNOG00000011709	Pum1	100	98.570	Rattus_norvegicus
ENSPCOG00000004398	PUM1	100	99.634	ENSRBIG00000042521	PUM1	100	99.758	Rhinopithecus_bieti
ENSPCOG00000004398	PUM1	100	99.757	ENSRROG00000020156	PUM1	100	99.639	Rhinopithecus_roxellana
ENSPCOG00000004398	PUM1	100	99.682	ENSSBOG00000032037	PUM1	100	99.682	Saimiri_boliviensis_boliviensis
ENSPCOG00000004398	PUM1	100	97.826	ENSSHAG00000010918	PUM1	100	97.565	Sarcophilus_harrisii
ENSPCOG00000004398	PUM1	100	80.817	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSPCOG00000004398	PUM1	100	91.325	ENSSDUG00000009021	pum1	94	90.843	Seriola_dumerili
ENSPCOG00000004398	PUM1	95	91.325	ENSSLDG00000009667	pum1	93	90.843	Seriola_lalandi_dorsalis
ENSPCOG00000004398	PUM1	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSPCOG00000004398	PUM1	100	98.551	ENSSPUG00000006267	PUM1	100	97.056	Sphenodon_punctatus
ENSPCOG00000004398	PUM1	90	91.325	ENSSPAG00000016636	pum1	100	79.079	Stegastes_partitus
ENSPCOG00000004398	PUM1	100	99.579	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSPCOG00000004398	PUM1	100	91.325	ENSTRUG00000013121	pum1	94	90.843	Takifugu_rubripes
ENSPCOG00000004398	PUM1	100	91.106	ENSTNIG00000016983	pum1	93	90.625	Tetraodon_nigroviridis
ENSPCOG00000004398	PUM1	93	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSPCOG00000004398	PUM1	92	99.271	ENSTTRG00000007436	PUM1	90	99.271	Tursiops_truncatus
ENSPCOG00000004398	PUM1	99	99.026	ENSUAMG00000018262	-	100	98.894	Ursus_americanus
ENSPCOG00000004398	PUM1	100	99.009	ENSUMAG00000009211	PUM1	100	99.517	Ursus_maritimus
ENSPCOG00000004398	PUM1	100	99.128	ENSVPAG00000005902	PUM1	92	99.378	Vicugna_pacos
ENSPCOG00000004398	PUM1	100	99.515	ENSVVUG00000014631	PUM1	100	99.517	Vulpes_vulpes
ENSPCOG00000004398	PUM1	100	89.130	ENSXETG00000012904	pum1	99	86.902	Xenopus_tropicalis
ENSPCOG00000004398	PUM1	100	80.817	ENSXMAG00000002945	pum1	100	77.847	Xiphophorus_maculatus