EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000005478 (Gene tree)
Gene ID: 105813070
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 9520 bases
Position: chrKQ022291.1:1087681-1097200
Accession: 105813070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000001775	RRM_1	PF00076.22	3.9e-18	1	1
ENSPCOP00000001766	RRM_1	PF00076.22	6.5e-18	1	1
ENSPCOP00000001764	RRM_1	PF00076.22	7.3e-18	1	1
ENSPCOP00000001770	RRM_1	PF00076.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000006226	RNPS1-202	1259	XM_012647662	ENSPCOP00000001766	282 (aa)	XP_012503116	A0A2K6EJ68
ENSPCOT00000006250	RNPS1-203	744	-	ENSPCOP00000001770	247 (aa)	-	A0A2K6EJ62
ENSPCOT00000006256	RNPS1-204	636	-	ENSPCOP00000001775	211 (aa)	-	A0A2K6EJ67
ENSPCOT00000006218	RNPS1-201	2481	XM_012647658	ENSPCOP00000001764	305 (aa)	XP_012503112	A0A2K6EJ49

Gene Model

Click here to download ENSPCOG00000005478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000005478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000005478	RNPS1	100	100.000	ENSG00000205937	RNPS1	100	100.000	Homo_sapiens
ENSPCOG00000005478	RNPS1	82	66.502	ENSAPOG00000014649	-	85	69.710	Acanthochromis_polyacanthus
ENSPCOG00000005478	RNPS1	100	99.672	ENSAMEG00000017861	RNPS1	100	99.672	Ailuropoda_melanoleuca
ENSPCOG00000005478	RNPS1	76	67.442	ENSACIG00000014367	-	76	66.047	Amphilophus_citrinellus
ENSPCOG00000005478	RNPS1	85	70.417	ENSAOCG00000002404	RNPS1	84	70.417	Amphiprion_ocellaris
ENSPCOG00000005478	RNPS1	82	65.347	ENSAPEG00000019263	-	81	68.724	Amphiprion_percula
ENSPCOG00000005478	RNPS1	85	70.293	ENSAPEG00000006497	RNPS1	81	70.293	Amphiprion_percula
ENSPCOG00000005478	RNPS1	85	71.667	ENSATEG00000024267	RNPS1	84	72.199	Anabas_testudineus
ENSPCOG00000005478	RNPS1	59	93.548	ENSAPLG00000006231	RNPS1	65	93.548	Anas_platyrhynchos
ENSPCOG00000005478	RNPS1	82	93.069	ENSACAG00000004088	RNPS1	94	90.558	Anolis_carolinensis
ENSPCOG00000005478	RNPS1	91	89.286	ENSANAG00000029802	-	90	92.469	Aotus_nancymaae
ENSPCOG00000005478	RNPS1	100	100.000	ENSANAG00000028802	RNPS1	100	100.000	Aotus_nancymaae
ENSPCOG00000005478	RNPS1	85	64.167	ENSACLG00000021537	-	96	67.925	Astatotilapia_calliptera
ENSPCOG00000005478	RNPS1	97	66.667	ENSAMXG00000006330	-	84	68.750	Astyanax_mexicanus
ENSPCOG00000005478	RNPS1	55	80.342	ENSAMXG00000037447	RNPS1	75	69.388	Astyanax_mexicanus
ENSPCOG00000005478	RNPS1	100	99.016	ENSBTAG00000009969	RNPS1	100	99.016	Bos_taurus
ENSPCOG00000005478	RNPS1	100	100.000	ENSCJAG00000014969	RNPS1	100	100.000	Callithrix_jacchus
ENSPCOG00000005478	RNPS1	100	99.672	ENSCAFG00000019397	RNPS1	100	99.672	Canis_familiaris
ENSPCOG00000005478	RNPS1	100	99.672	ENSCAFG00020026159	RNPS1	100	99.672	Canis_lupus_dingo
ENSPCOG00000005478	RNPS1	85	98.086	ENSCHIG00000014621	-	70	99.034	Capra_hircus
ENSPCOG00000005478	RNPS1	100	100.000	ENSTSYG00000001629	RNPS1	100	100.000	Carlito_syrichta
ENSPCOG00000005478	RNPS1	82	95.545	ENSTSYG00000031848	-	98	95.000	Carlito_syrichta
ENSPCOG00000005478	RNPS1	100	99.344	ENSCAPG00000007731	RNPS1	100	99.344	Cavia_aperea
ENSPCOG00000005478	RNPS1	100	99.344	ENSCPOG00000002066	RNPS1	100	99.344	Cavia_porcellus
ENSPCOG00000005478	RNPS1	100	99.526	ENSCCAG00000034480	RNPS1	100	99.526	Cebus_capucinus
ENSPCOG00000005478	RNPS1	95	90.034	ENSCATG00000042361	-	100	82.239	Cercocebus_atys
ENSPCOG00000005478	RNPS1	100	100.000	ENSCATG00000013756	RNPS1	100	100.000	Cercocebus_atys
ENSPCOG00000005478	RNPS1	100	99.344	ENSCLAG00000015546	RNPS1	100	99.344	Chinchilla_lanigera
ENSPCOG00000005478	RNPS1	100	96.809	ENSCSAG00000005219	-	95	96.809	Chlorocebus_sabaeus
ENSPCOG00000005478	RNPS1	100	98.033	ENSCHOG00000004866	RNPS1	100	98.033	Choloepus_hoffmanni
ENSPCOG00000005478	RNPS1	80	69.951	ENSCPBG00000000214	RNPS1	95	69.849	Chrysemys_picta_bellii
ENSPCOG00000005478	RNPS1	87	81.532	ENSCANG00000030189	-	99	65.399	Colobus_angolensis_palliatus
ENSPCOG00000005478	RNPS1	100	100.000	ENSCANG00000041307	RNPS1	100	100.000	Colobus_angolensis_palliatus
ENSPCOG00000005478	RNPS1	54	80.531	ENSCGRG00001010012	-	51	88.679	Cricetulus_griseus_chok1gshd
ENSPCOG00000005478	RNPS1	100	99.672	ENSCGRG00001020431	Rnps1	100	99.672	Cricetulus_griseus_chok1gshd
ENSPCOG00000005478	RNPS1	54	80.531	ENSCGRG00000018236	-	51	88.679	Cricetulus_griseus_crigri
ENSPCOG00000005478	RNPS1	100	99.016	ENSCGRG00000014021	Rnps1	80	99.587	Cricetulus_griseus_crigri
ENSPCOG00000005478	RNPS1	60	96.850	ENSCGRG00000010104	-	100	96.850	Cricetulus_griseus_crigri
ENSPCOG00000005478	RNPS1	85	69.456	ENSCSEG00000015997	RNPS1	82	69.456	Cynoglossus_semilaevis
ENSPCOG00000005478	RNPS1	85	70.833	ENSCSEG00000000402	RNPS1	85	68.321	Cynoglossus_semilaevis
ENSPCOG00000005478	RNPS1	82	67.157	ENSCVAG00000010868	RNPS1	75	64.352	Cyprinodon_variegatus
ENSPCOG00000005478	RNPS1	85	64.167	ENSDARG00000116743	rnps1	84	70.124	Danio_rerio
ENSPCOG00000005478	RNPS1	85	64.167	ENSDARG00000100188	RNPS1	84	70.124	Danio_rerio
ENSPCOG00000005478	RNPS1	100	99.672	ENSDNOG00000016081	RNPS1	100	99.672	Dasypus_novemcinctus
ENSPCOG00000005478	RNPS1	79	72.959	ENSDNOG00000038751	-	99	72.222	Dasypus_novemcinctus
ENSPCOG00000005478	RNPS1	100	99.016	ENSDORG00000001755	Rnps1	100	99.016	Dipodomys_ordii
ENSPCOG00000005478	RNPS1	100	99.672	ENSEASG00005004862	RNPS1	100	99.672	Equus_asinus_asinus
ENSPCOG00000005478	RNPS1	83	98.537	ENSECAG00000023288	RNPS1	83	97.835	Equus_caballus
ENSPCOG00000005478	RNPS1	100	80.984	ENSEEUG00000005933	RNPS1	100	80.984	Erinaceus_europaeus
ENSPCOG00000005478	RNPS1	100	100.000	ENSFCAG00000007690	RNPS1	100	100.000	Felis_catus
ENSPCOG00000005478	RNPS1	85	94.979	ENSFALG00000004868	RNPS1	85	95.000	Ficedula_albicollis
ENSPCOG00000005478	RNPS1	100	99.344	ENSFDAG00000003386	RNPS1	100	99.344	Fukomys_damarensis
ENSPCOG00000005478	RNPS1	82	70.098	ENSFHEG00000011705	RNPS1	75	70.968	Fundulus_heteroclitus
ENSPCOG00000005478	RNPS1	85	95.000	ENSGALG00000009288	RNPS1	85	95.000	Gallus_gallus
ENSPCOG00000005478	RNPS1	82	65.196	ENSGAFG00000005457	RNPS1	75	62.500	Gambusia_affinis
ENSPCOG00000005478	RNPS1	85	68.465	ENSGACG00000005641	-	84	68.465	Gasterosteus_aculeatus
ENSPCOG00000005478	RNPS1	86	92.776	ENSGAGG00000010452	RNPS1	86	92.776	Gopherus_agassizii
ENSPCOG00000005478	RNPS1	100	100.000	ENSGGOG00000014275	RNPS1	100	100.000	Gorilla_gorilla
ENSPCOG00000005478	RNPS1	87	95.455	ENSGGOG00000026421	-	100	89.655	Gorilla_gorilla
ENSPCOG00000005478	RNPS1	79	64.315	ENSHBUG00000017337	-	84	71.784	Haplochromis_burtoni
ENSPCOG00000005478	RNPS1	100	99.672	ENSHGLG00000013957	RNPS1	100	99.672	Heterocephalus_glaber_female
ENSPCOG00000005478	RNPS1	94	87.931	ENSHGLG00000006292	-	97	94.737	Heterocephalus_glaber_female
ENSPCOG00000005478	RNPS1	82	80.882	ENSHGLG00100017879	-	80	69.835	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	100	99.672	ENSHGLG00100003539	RNPS1	100	99.672	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	86	91.635	ENSHGLG00100001721	-	65	88.614	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	88	89.450	ENSHGLG00100011610	-	89	89.450	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	80	90.533	ENSHGLG00100010622	-	74	91.589	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	92	93.846	ENSHGLG00100015267	-	80	95.045	Heterocephalus_glaber_male
ENSPCOG00000005478	RNPS1	55	81.197	ENSIPUG00000011746	rnps1	93	78.423	Ictalurus_punctatus
ENSPCOG00000005478	RNPS1	80	100.000	ENSSTOG00000013200	RNPS1	100	87.869	Ictidomys_tridecemlineatus
ENSPCOG00000005478	RNPS1	86	81.749	ENSJJAG00000019234	-	68	79.079	Jaculus_jaculus
ENSPCOG00000005478	RNPS1	100	99.344	ENSJJAG00000015576	-	100	99.344	Jaculus_jaculus
ENSPCOG00000005478	RNPS1	63	94.737	ENSJJAG00000000532	-	60	95.968	Jaculus_jaculus
ENSPCOG00000005478	RNPS1	85	71.369	ENSKMAG00000009135	RNPS1	84	66.805	Kryptolebias_marmoratus
ENSPCOG00000005478	RNPS1	55	85.470	ENSLBEG00000015904	-	59	83.871	Labrus_bergylta
ENSPCOG00000005478	RNPS1	52	75.455	ENSLBEG00000024091	RNPS1	75	64.186	Labrus_bergylta
ENSPCOG00000005478	RNPS1	85	88.333	ENSLACG00000007112	RNPS1	85	88.333	Latimeria_chalumnae
ENSPCOG00000005478	RNPS1	85	67.917	ENSLOCG00000001758	RNPS1	84	83.750	Lepisosteus_oculatus
ENSPCOG00000005478	RNPS1	93	100.000	ENSLAFG00000000728	RNPS1	50	100.000	Loxodonta_africana
ENSPCOG00000005478	RNPS1	100	100.000	ENSMFAG00000042142	RNPS1	100	100.000	Macaca_fascicularis
ENSPCOG00000005478	RNPS1	86	89.354	ENSMFAG00000044121	-	83	82.857	Macaca_fascicularis
ENSPCOG00000005478	RNPS1	100	100.000	ENSMMUG00000019238	-	100	100.000	Macaca_mulatta
ENSPCOG00000005478	RNPS1	88	94.403	ENSMMUG00000041726	-	92	94.297	Macaca_mulatta
ENSPCOG00000005478	RNPS1	88	94.776	ENSMNEG00000024827	-	92	94.677	Macaca_nemestrina
ENSPCOG00000005478	RNPS1	100	100.000	ENSMLEG00000036928	RNPS1	100	100.000	Mandrillus_leucophaeus
ENSPCOG00000005478	RNPS1	100	85.603	ENSMLEG00000040232	-	100	85.603	Mandrillus_leucophaeus
ENSPCOG00000005478	RNPS1	96	65.417	ENSMAMG00000021609	-	84	70.124	Mastacembelus_armatus
ENSPCOG00000005478	RNPS1	85	74.167	ENSMAMG00000021148	-	88	67.816	Mastacembelus_armatus
ENSPCOG00000005478	RNPS1	82	60.784	ENSMZEG00005006256	-	85	71.784	Maylandia_zebra
ENSPCOG00000005478	RNPS1	82	94.554	ENSMGAG00000010042	RNPS1	98	94.068	Meleagris_gallopavo
ENSPCOG00000005478	RNPS1	61	100.000	ENSMAUG00000004017	-	100	100.000	Mesocricetus_auratus
ENSPCOG00000005478	RNPS1	100	99.672	ENSMICG00000031543	RNPS1	100	99.672	Microcebus_murinus
ENSPCOG00000005478	RNPS1	100	99.672	ENSMOCG00000003429	Rnps1	100	99.672	Microtus_ochrogaster
ENSPCOG00000005478	RNPS1	81	64.677	ENSMMOG00000010863	RNPS1	75	64.651	Mola_mola
ENSPCOG00000005478	RNPS1	100	97.386	ENSMODG00000015891	RNPS1	100	97.386	Monodelphis_domestica
ENSPCOG00000005478	RNPS1	94	60.515	MGP_CAROLIEiJ_G0021182	-	69	60.515	Mus_caroli
ENSPCOG00000005478	RNPS1	100	99.672	ENSMUSG00000034681	Rnps1	100	99.672	Mus_musculus
ENSPCOG00000005478	RNPS1	100	99.645	MGP_PahariEiJ_G0023498	Rnps1	100	99.645	Mus_pahari
ENSPCOG00000005478	RNPS1	100	99.672	MGP_SPRETEiJ_G0022092	Rnps1	100	99.672	Mus_spretus
ENSPCOG00000005478	RNPS1	100	99.672	ENSMLUG00000016808	RNPS1	100	99.672	Myotis_lucifugus
ENSPCOG00000005478	RNPS1	100	99.645	ENSNGAG00000023702	Rnps1	100	99.645	Nannospalax_galili
ENSPCOG00000005478	RNPS1	91	56.195	ENSNBRG00000014540	-	92	68.359	Neolamprologus_brichardi
ENSPCOG00000005478	RNPS1	81	66.169	ENSNBRG00000023437	RNPS1	75	66.047	Neolamprologus_brichardi
ENSPCOG00000005478	RNPS1	89	97.794	ENSNLEG00000009243	RNPS1	100	97.794	Nomascus_leucogenys
ENSPCOG00000005478	RNPS1	100	96.393	ENSMEUG00000008882	RNPS1	100	96.393	Notamacropus_eugenii
ENSPCOG00000005478	RNPS1	100	97.049	ENSOPRG00000016422	RNPS1	100	97.049	Ochotona_princeps
ENSPCOG00000005478	RNPS1	92	68.718	ENSODEG00000017258	-	77	68.047	Octodon_degus
ENSPCOG00000005478	RNPS1	60	73.228	ENSODEG00000003850	-	55	90.476	Octodon_degus
ENSPCOG00000005478	RNPS1	93	67.005	ENSODEG00000002513	-	79	68.047	Octodon_degus
ENSPCOG00000005478	RNPS1	82	59.804	ENSONIG00000019627	-	85	71.369	Oreochromis_niloticus
ENSPCOG00000005478	RNPS1	52	79.817	ENSORLG00000008033	RNPS1	51	65.421	Oryzias_latipes
ENSPCOG00000005478	RNPS1	85	69.583	ENSORLG00015011183	RNPS1	74	70.954	Oryzias_latipes_hsok
ENSPCOG00000005478	RNPS1	62	100.000	ENSOGAG00000031582	-	99	100.000	Otolemur_garnettii
ENSPCOG00000005478	RNPS1	95	98.966	ENSOARG00000018056	-	81	98.966	Ovis_aries
ENSPCOG00000005478	RNPS1	86	95.283	ENSPPAG00000037836	-	96	98.684	Pan_paniscus
ENSPCOG00000005478	RNPS1	89	94.444	ENSPPAG00000011845	RNPS1	91	93.004	Pan_paniscus
ENSPCOG00000005478	RNPS1	100	100.000	ENSPPRG00000011255	RNPS1	100	100.000	Panthera_pardus
ENSPCOG00000005478	RNPS1	80	90.533	ENSPTIG00000015643	RNPS1	85	100.000	Panthera_tigris_altaica
ENSPCOG00000005478	RNPS1	87	95.370	ENSPTRG00000046326	-	91	93.305	Pan_troglodytes
ENSPCOG00000005478	RNPS1	100	100.000	ENSPTRG00000031310	RNPS1	100	100.000	Pan_troglodytes
ENSPCOG00000005478	RNPS1	100	69.261	ENSPANG00000033576	-	97	70.120	Papio_anubis
ENSPCOG00000005478	RNPS1	100	100.000	ENSPANG00000015748	RNPS1	100	100.000	Papio_anubis
ENSPCOG00000005478	RNPS1	85	80.083	ENSPKIG00000023465	RNPS1	85	80.083	Paramormyrops_kingsleyae
ENSPCOG00000005478	RNPS1	85	93.724	ENSPSIG00000006048	RNPS1	86	92.395	Pelodiscus_sinensis
ENSPCOG00000005478	RNPS1	52	78.182	ENSPMGG00000015888	-	75	66.204	Periophthalmus_magnuspinnatus
ENSPCOG00000005478	RNPS1	100	99.672	ENSPEMG00000012797	Rnps1	100	99.672	Peromyscus_maniculatus_bairdii
ENSPCOG00000005478	RNPS1	100	97.872	ENSPCIG00000025012	RNPS1	100	97.872	Phascolarctos_cinereus
ENSPCOG00000005478	RNPS1	80	91.124	ENSPCIG00000016114	-	80	98.387	Phascolarctos_cinereus
ENSPCOG00000005478	RNPS1	82	66.176	ENSPFOG00000009978	RNPS1	75	63.426	Poecilia_formosa
ENSPCOG00000005478	RNPS1	82	66.176	ENSPLAG00000009343	RNPS1	75	63.426	Poecilia_latipinna
ENSPCOG00000005478	RNPS1	82	66.176	ENSPMEG00000008552	RNPS1	75	63.426	Poecilia_mexicana
ENSPCOG00000005478	RNPS1	82	66.176	ENSPREG00000001843	RNPS1	75	63.426	Poecilia_reticulata
ENSPCOG00000005478	RNPS1	100	97.377	ENSPCAG00000004514	RNPS1	100	97.377	Procavia_capensis
ENSPCOG00000005478	RNPS1	100	99.344	ENSPVAG00000005105	RNPS1	100	99.344	Pteropus_vampyrus
ENSPCOG00000005478	RNPS1	85	75.833	ENSPNAG00000025479	RNPS1	84	69.167	Pygocentrus_nattereri
ENSPCOG00000005478	RNPS1	55	83.761	ENSPNAG00000017784	-	85	77.778	Pygocentrus_nattereri
ENSPCOG00000005478	RNPS1	85	86.486	ENSRNOG00000027239	AABR07037800.1	65	84.158	Rattus_norvegicus
ENSPCOG00000005478	RNPS1	100	99.344	ENSRNOG00000008703	Rnps1	100	99.344	Rattus_norvegicus
ENSPCOG00000005478	RNPS1	99	98.932	ENSRBIG00000038965	-	99	98.932	Rhinopithecus_bieti
ENSPCOG00000005478	RNPS1	62	82.443	ENSRBIG00000013248	-	64	82.258	Rhinopithecus_bieti
ENSPCOG00000005478	RNPS1	89	99.632	ENSRROG00000041252	RNPS1	97	96.218	Rhinopithecus_roxellana
ENSPCOG00000005478	RNPS1	100	100.000	ENSSBOG00000027927	RNPS1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPCOG00000005478	RNPS1	100	97.705	ENSSHAG00000016951	RNPS1	100	97.705	Sarcophilus_harrisii
ENSPCOG00000005478	RNPS1	85	73.444	ENSSFOG00015022746	RNPS1	87	67.500	Scleropages_formosus
ENSPCOG00000005478	RNPS1	94	68.936	ENSSFOG00015019341	-	75	69.710	Scleropages_formosus
ENSPCOG00000005478	RNPS1	61	78.906	ENSSMAG00000005367	-	72	81.452	Scophthalmus_maximus
ENSPCOG00000005478	RNPS1	85	70.417	ENSSDUG00000011453	RNPS1	84	70.954	Seriola_dumerili
ENSPCOG00000005478	RNPS1	52	84.404	ENSSDUG00000006433	-	85	67.557	Seriola_dumerili
ENSPCOG00000005478	RNPS1	82	96.040	ENSSARG00000001577	RNPS1	86	96.694	Sorex_araneus
ENSPCOG00000005478	RNPS1	86	93.156	ENSSPUG00000016588	RNPS1	86	93.156	Sphenodon_punctatus
ENSPCOG00000005478	RNPS1	58	79.032	ENSSPAG00000009383	RNPS1	84	71.369	Stegastes_partitus
ENSPCOG00000005478	RNPS1	100	99.344	ENSSSCG00000008048	RNPS1	100	99.344	Sus_scrofa
ENSPCOG00000005478	RNPS1	85	95.397	ENSTGUG00000003237	RNPS1	85	95.417	Taeniopygia_guttata
ENSPCOG00000005478	RNPS1	85	71.784	ENSTRUG00000008602	RNPS1	84	71.784	Takifugu_rubripes
ENSPCOG00000005478	RNPS1	85	72.083	ENSTNIG00000009753	RNPS1	84	72.016	Tetraodon_nigroviridis
ENSPCOG00000005478	RNPS1	89	99.632	ENSTBEG00000009098	RNPS1	100	99.632	Tupaia_belangeri
ENSPCOG00000005478	RNPS1	100	99.672	ENSTTRG00000008220	RNPS1	100	99.672	Tursiops_truncatus
ENSPCOG00000005478	RNPS1	99	95.935	ENSUAMG00000004462	RNPS1	100	99.634	Ursus_americanus
ENSPCOG00000005478	RNPS1	100	99.672	ENSUMAG00000022327	RNPS1	100	99.672	Ursus_maritimus
ENSPCOG00000005478	RNPS1	100	99.672	ENSVVUG00000009244	RNPS1	100	99.672	Vulpes_vulpes
ENSPCOG00000005478	RNPS1	81	72.174	ENSXETG00000024439	rnps1	73	72.124	Xenopus_tropicalis
ENSPCOG00000005478	RNPS1	85	67.220	ENSXMAG00000004827	RNPS1	84	63.750	Xiphophorus_maculatus