EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000005603 (Gene tree)
Gene ID: 105818789
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 23484 bases
Position: chrKQ024291.1:510956-534439
Accession: 105818789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000001798	RTC	PF01137.21	1.6e-87	1	1
ENSPCOP00000001802	RTC	PF01137.21	8.1e-13	1	1
ENSPCOP00000001798	RTC_insert	PF05189.13	8.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000006328	RTCA-201	1599	XM_012654895	ENSPCOP00000001798	366 (aa)	XP_012510349	A0A2K6EJ84
ENSPCOT00000006333	RTCA-202	159	-	ENSPCOP00000001802	52 (aa)	-	A0A2K6EJA8

Gene Model

Click here to download ENSPCOG00000005603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000005603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000005603	RTCA	100	96.721	ENSG00000137996	RTCA	100	96.721	Homo_sapiens
ENSPCOG00000005603	RTCA	99	72.299	ENSAPOG00000001345	rtca	98	72.299	Acanthochromis_polyacanthus
ENSPCOG00000005603	RTCA	73	95.911	ENSAMEG00000008855	RTCA	100	95.911	Ailuropoda_melanoleuca
ENSPCOG00000005603	RTCA	99	72.576	ENSACIG00000019643	rtca	99	72.576	Amphilophus_citrinellus
ENSPCOG00000005603	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSPCOG00000005603	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSPCOG00000005603	RTCA	100	70.492	ENSATEG00000006315	rtca	100	70.492	Anabas_testudineus
ENSPCOG00000005603	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSPCOG00000005603	RTCA	88	84.783	ENSACAG00000003290	RTCA	94	83.636	Anolis_carolinensis
ENSPCOG00000005603	RTCA	100	95.902	ENSANAG00000025446	RTCA	100	95.902	Aotus_nancymaae
ENSPCOG00000005603	RTCA	100	70.765	ENSACLG00000020770	rtca	99	70.765	Astatotilapia_calliptera
ENSPCOG00000005603	RTCA	100	73.770	ENSAMXG00000043271	rtca	100	73.770	Astyanax_mexicanus
ENSPCOG00000005603	RTCA	100	96.448	ENSBTAG00000006321	RTCA	100	96.448	Bos_taurus
ENSPCOG00000005603	RTCA	100	96.175	ENSCJAG00000003398	RTCA	100	96.175	Callithrix_jacchus
ENSPCOG00000005603	RTCA	100	97.268	ENSCAFG00000020010	RTCA	68	97.268	Canis_familiaris
ENSPCOG00000005603	RTCA	100	97.268	ENSCAFG00020011528	RTCA	57	97.268	Canis_lupus_dingo
ENSPCOG00000005603	RTCA	100	96.175	ENSCHIG00000018937	RTCA	100	96.175	Capra_hircus
ENSPCOG00000005603	RTCA	100	94.809	ENSTSYG00000011305	RTCA	100	94.809	Carlito_syrichta
ENSPCOG00000005603	RTCA	92	95.833	ENSCPOG00000009296	-	99	97.122	Cavia_porcellus
ENSPCOG00000005603	RTCA	100	95.902	ENSCCAG00000021844	RTCA	100	95.902	Cebus_capucinus
ENSPCOG00000005603	RTCA	100	93.404	ENSCATG00000019364	RTCA	100	96.764	Cercocebus_atys
ENSPCOG00000005603	RTCA	87	96.530	ENSCLAG00000006125	RTCA	100	96.530	Chinchilla_lanigera
ENSPCOG00000005603	RTCA	100	96.995	ENSCSAG00000001509	RTCA	100	96.995	Chlorocebus_sabaeus
ENSPCOG00000005603	RTCA	100	95.082	ENSCHOG00000005211	RTCA	100	95.082	Choloepus_hoffmanni
ENSPCOG00000005603	RTCA	100	84.153	ENSCPBG00000026658	RTCA	100	84.153	Chrysemys_picta_bellii
ENSPCOG00000005603	RTCA	98	56.510	ENSCING00000007875	-	98	56.510	Ciona_intestinalis
ENSPCOG00000005603	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSPCOG00000005603	RTCA	100	96.721	ENSCANG00000040106	RTCA	100	96.721	Colobus_angolensis_palliatus
ENSPCOG00000005603	RTCA	73	92.565	ENSCGRG00001013163	Rtca	85	92.565	Cricetulus_griseus_chok1gshd
ENSPCOG00000005603	RTCA	92	97.917	ENSCGRG00001001848	-	83	93.069	Cricetulus_griseus_chok1gshd
ENSPCOG00000005603	RTCA	92	97.917	ENSCGRG00000002803	-	76	93.939	Cricetulus_griseus_crigri
ENSPCOG00000005603	RTCA	98	70.000	ENSCSEG00000000530	rtca	96	70.000	Cynoglossus_semilaevis
ENSPCOG00000005603	RTCA	100	59.836	ENSCVAG00000021809	rtca	100	59.836	Cyprinodon_variegatus
ENSPCOG00000005603	RTCA	100	74.590	ENSDARG00000002215	rtca	100	74.590	Danio_rerio
ENSPCOG00000005603	RTCA	100	95.355	ENSDNOG00000000456	RTCA	100	95.355	Dasypus_novemcinctus
ENSPCOG00000005603	RTCA	100	94.262	ENSDORG00000005448	Rtca	100	94.262	Dipodomys_ordii
ENSPCOG00000005603	RTCA	92	58.333	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSPCOG00000005603	RTCA	92	65.306	ENSEBUG00000008556	rtca	97	55.085	Eptatretus_burgeri
ENSPCOG00000005603	RTCA	100	95.902	ENSEASG00005015926	RTCA	100	95.902	Equus_asinus_asinus
ENSPCOG00000005603	RTCA	100	95.902	ENSECAG00000019831	RTCA	100	95.902	Equus_caballus
ENSPCOG00000005603	RTCA	92	100.000	ENSEEUG00000001165	RTCA	100	84.393	Erinaceus_europaeus
ENSPCOG00000005603	RTCA	99	72.576	ENSELUG00000003741	rtca	99	72.576	Esox_lucius
ENSPCOG00000005603	RTCA	100	97.268	ENSFCAG00000024460	RTCA	100	97.268	Felis_catus
ENSPCOG00000005603	RTCA	91	84.384	ENSFALG00000002443	RTCA	90	84.384	Ficedula_albicollis
ENSPCOG00000005603	RTCA	100	95.902	ENSFDAG00000012070	-	100	95.902	Fukomys_damarensis
ENSPCOG00000005603	RTCA	98	73.757	ENSFDAG00000016084	-	100	73.757	Fukomys_damarensis
ENSPCOG00000005603	RTCA	72	61.832	ENSFHEG00000002868	rtca	96	69.027	Fundulus_heteroclitus
ENSPCOG00000005603	RTCA	100	69.399	ENSGMOG00000013264	rtca	100	69.399	Gadus_morhua
ENSPCOG00000005603	RTCA	100	83.333	ENSGALG00000005277	RTCA	100	83.333	Gallus_gallus
ENSPCOG00000005603	RTCA	100	71.858	ENSGAFG00000011853	rtca	99	71.858	Gambusia_affinis
ENSPCOG00000005603	RTCA	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSPCOG00000005603	RTCA	92	85.417	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSPCOG00000005603	RTCA	100	96.721	ENSGGOG00000009546	-	100	96.764	Gorilla_gorilla
ENSPCOG00000005603	RTCA	100	96.175	ENSGGOG00000044018	-	100	96.175	Gorilla_gorilla
ENSPCOG00000005603	RTCA	100	70.492	ENSHBUG00000002114	rtca	99	70.492	Haplochromis_burtoni
ENSPCOG00000005603	RTCA	100	94.809	ENSHGLG00000002617	RTCA	100	94.809	Heterocephalus_glaber_female
ENSPCOG00000005603	RTCA	100	94.809	ENSHGLG00100006056	RTCA	100	94.809	Heterocephalus_glaber_male
ENSPCOG00000005603	RTCA	100	63.934	ENSHCOG00000020628	rtca	88	64.543	Hippocampus_comes
ENSPCOG00000005603	RTCA	100	73.770	ENSIPUG00000024803	rtca	100	73.770	Ictalurus_punctatus
ENSPCOG00000005603	RTCA	100	89.617	ENSSTOG00000013528	-	100	89.617	Ictidomys_tridecemlineatus
ENSPCOG00000005603	RTCA	100	85.014	ENSSTOG00000033099	-	100	85.014	Ictidomys_tridecemlineatus
ENSPCOG00000005603	RTCA	92	95.833	ENSJJAG00000016178	Rtca	100	67.486	Jaculus_jaculus
ENSPCOG00000005603	RTCA	99	72.576	ENSKMAG00000006651	rtca	98	72.576	Kryptolebias_marmoratus
ENSPCOG00000005603	RTCA	88	69.470	ENSLBEG00000002448	-	99	69.470	Labrus_bergylta
ENSPCOG00000005603	RTCA	99	69.806	ENSLBEG00000028971	rtca	99	69.806	Labrus_bergylta
ENSPCOG00000005603	RTCA	100	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSPCOG00000005603	RTCA	100	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSPCOG00000005603	RTCA	100	95.082	ENSLAFG00000001473	RTCA	100	95.082	Loxodonta_africana
ENSPCOG00000005603	RTCA	100	96.995	ENSMFAG00000034132	RTCA	100	96.995	Macaca_fascicularis
ENSPCOG00000005603	RTCA	100	96.448	ENSMMUG00000019105	RTCA	100	96.448	Macaca_mulatta
ENSPCOG00000005603	RTCA	84	97.087	ENSMNEG00000037163	RTCA	100	97.087	Macaca_nemestrina
ENSPCOG00000005603	RTCA	94	95.918	ENSMLEG00000042151	RTCA	100	79.508	Mandrillus_leucophaeus
ENSPCOG00000005603	RTCA	100	73.497	ENSMAMG00000016536	rtca	100	73.497	Mastacembelus_armatus
ENSPCOG00000005603	RTCA	100	70.765	ENSMZEG00005017945	rtca	99	70.765	Maylandia_zebra
ENSPCOG00000005603	RTCA	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSPCOG00000005603	RTCA	100	92.896	ENSMAUG00000008488	Rtca	100	92.896	Mesocricetus_auratus
ENSPCOG00000005603	RTCA	84	99.029	ENSMICG00000008643	RTCA	100	99.029	Microcebus_murinus
ENSPCOG00000005603	RTCA	100	93.716	ENSMOCG00000016660	Rtca	100	93.716	Microtus_ochrogaster
ENSPCOG00000005603	RTCA	84	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSPCOG00000005603	RTCA	100	91.257	ENSMODG00000003557	RTCA	100	91.257	Monodelphis_domestica
ENSPCOG00000005603	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSPCOG00000005603	RTCA	100	96.154	MGP_CAROLIEiJ_G0025565	Rtca	100	96.154	Mus_caroli
ENSPCOG00000005603	RTCA	100	96.154	ENSMUSG00000000339	Rtca	100	96.154	Mus_musculus
ENSPCOG00000005603	RTCA	100	96.154	MGP_PahariEiJ_G0027011	Rtca	100	96.154	Mus_pahari
ENSPCOG00000005603	RTCA	100	96.154	MGP_SPRETEiJ_G0026515	Rtca	100	96.154	Mus_spretus
ENSPCOG00000005603	RTCA	100	97.268	ENSMPUG00000012119	RTCA	100	97.268	Mustela_putorius_furo
ENSPCOG00000005603	RTCA	100	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSPCOG00000005603	RTCA	100	93.169	ENSNGAG00000011540	Rtca	99	93.169	Nannospalax_galili
ENSPCOG00000005603	RTCA	100	70.765	ENSNBRG00000003062	rtca	99	70.765	Neolamprologus_brichardi
ENSPCOG00000005603	RTCA	100	96.721	ENSNLEG00000031426	RTCA	100	96.721	Nomascus_leucogenys
ENSPCOG00000005603	RTCA	92	95.833	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSPCOG00000005603	RTCA	73	88.476	ENSOPRG00000012092	RTCA	71	88.476	Ochotona_princeps
ENSPCOG00000005603	RTCA	95	95.690	ENSODEG00000006990	RTCA	96	95.726	Octodon_degus
ENSPCOG00000005603	RTCA	100	70.765	ENSONIG00000007753	rtca	99	70.765	Oreochromis_niloticus
ENSPCOG00000005603	RTCA	87	88.013	ENSOANG00000012055	RTCA	98	88.013	Ornithorhynchus_anatinus
ENSPCOG00000005603	RTCA	100	96.995	ENSOCUG00000014247	RTCA	100	96.995	Oryctolagus_cuniculus
ENSPCOG00000005603	RTCA	100	71.038	ENSORLG00000013605	rtca	100	71.038	Oryzias_latipes
ENSPCOG00000005603	RTCA	100	71.038	ENSORLG00020001904	rtca	100	71.038	Oryzias_latipes_hni
ENSPCOG00000005603	RTCA	100	71.038	ENSORLG00015021064	rtca	100	71.038	Oryzias_latipes_hsok
ENSPCOG00000005603	RTCA	100	71.858	ENSOMEG00000000756	rtca	100	71.858	Oryzias_melastigma
ENSPCOG00000005603	RTCA	94	97.959	ENSOGAG00000005627	RTCA	100	87.978	Otolemur_garnettii
ENSPCOG00000005603	RTCA	87	95.283	ENSOARG00000018122	RTCA	100	95.283	Ovis_aries
ENSPCOG00000005603	RTCA	100	92.876	ENSPPAG00000035119	RTCA	100	96.440	Pan_paniscus
ENSPCOG00000005603	RTCA	100	96.995	ENSPPRG00000000350	RTCA	100	96.995	Panthera_pardus
ENSPCOG00000005603	RTCA	100	96.995	ENSPTIG00000012816	RTCA	100	96.995	Panthera_tigris_altaica
ENSPCOG00000005603	RTCA	100	92.876	ENSPTRG00000001004	RTCA	100	96.440	Pan_troglodytes
ENSPCOG00000005603	RTCA	100	96.448	ENSPANG00000000346	RTCA	100	96.448	Papio_anubis
ENSPCOG00000005603	RTCA	100	74.863	ENSPKIG00000001653	rtca	100	74.863	Paramormyrops_kingsleyae
ENSPCOG00000005603	RTCA	100	84.699	ENSPSIG00000011408	RTCA	100	84.699	Pelodiscus_sinensis
ENSPCOG00000005603	RTCA	71	64.865	ENSPMGG00000022529	rtca	97	60.784	Periophthalmus_magnuspinnatus
ENSPCOG00000005603	RTCA	100	92.896	ENSPEMG00000018582	Rtca	100	92.896	Peromyscus_maniculatus_bairdii
ENSPCOG00000005603	RTCA	99	58.287	ENSPMAG00000009110	rtca	99	57.808	Petromyzon_marinus
ENSPCOG00000005603	RTCA	100	91.257	ENSPCIG00000007684	RTCA	100	91.257	Phascolarctos_cinereus
ENSPCOG00000005603	RTCA	100	72.480	ENSPFOG00000004824	rtca	100	72.480	Poecilia_formosa
ENSPCOG00000005603	RTCA	100	72.678	ENSPLAG00000011753	rtca	99	72.678	Poecilia_latipinna
ENSPCOG00000005603	RTCA	100	72.678	ENSPMEG00000020469	rtca	99	72.678	Poecilia_mexicana
ENSPCOG00000005603	RTCA	100	73.224	ENSPREG00000001365	rtca	99	73.224	Poecilia_reticulata
ENSPCOG00000005603	RTCA	92	95.833	ENSPPYG00000029514	-	96	97.938	Pongo_abelii
ENSPCOG00000005603	RTCA	100	96.721	ENSPPYG00000001115	RTCA	100	96.721	Pongo_abelii
ENSPCOG00000005603	RTCA	100	92.077	ENSPCAG00000005076	RTCA	100	92.077	Procavia_capensis
ENSPCOG00000005603	RTCA	94	100.000	ENSPVAG00000009478	RTCA	100	91.821	Pteropus_vampyrus
ENSPCOG00000005603	RTCA	100	70.765	ENSPNYG00000004722	rtca	99	70.765	Pundamilia_nyererei
ENSPCOG00000005603	RTCA	100	73.770	ENSPNAG00000022270	rtca	100	73.770	Pygocentrus_nattereri
ENSPCOG00000005603	RTCA	100	92.350	ENSRNOG00000014575	Rtca	100	92.350	Rattus_norvegicus
ENSPCOG00000005603	RTCA	100	92.876	ENSRBIG00000041180	RTCA	100	96.117	Rhinopithecus_bieti
ENSPCOG00000005603	RTCA	100	96.175	ENSRROG00000024929	RTCA	100	96.175	Rhinopithecus_roxellana
ENSPCOG00000005603	RTCA	100	95.355	ENSSBOG00000028626	RTCA	100	95.355	Saimiri_boliviensis_boliviensis
ENSPCOG00000005603	RTCA	100	91.803	ENSSHAG00000001758	RTCA	100	91.803	Sarcophilus_harrisii
ENSPCOG00000005603	RTCA	98	69.722	ENSSMAG00000014680	rtca	97	69.722	Scophthalmus_maximus
ENSPCOG00000005603	RTCA	98	71.944	ENSSDUG00000015585	rtca	97	71.944	Seriola_dumerili
ENSPCOG00000005603	RTCA	96	72.365	ENSSLDG00000018985	rtca	95	72.365	Seriola_lalandi_dorsalis
ENSPCOG00000005603	RTCA	87	87.382	ENSSARG00000013993	RTCA	100	87.382	Sorex_araneus
ENSPCOG00000005603	RTCA	92	85.417	ENSSPUG00000016262	-	88	87.050	Sphenodon_punctatus
ENSPCOG00000005603	RTCA	100	70.765	ENSSPAG00000011938	rtca	99	70.765	Stegastes_partitus
ENSPCOG00000005603	RTCA	100	96.175	ENSSSCG00000006865	RTCA	100	96.175	Sus_scrofa
ENSPCOG00000005603	RTCA	100	83.880	ENSTGUG00000005154	RTCA	100	83.880	Taeniopygia_guttata
ENSPCOG00000005603	RTCA	67	68.571	ENSTRUG00000002431	-	95	66.892	Takifugu_rubripes
ENSPCOG00000005603	RTCA	100	71.311	ENSTRUG00000008799	rtca	100	71.311	Takifugu_rubripes
ENSPCOG00000005603	RTCA	100	72.404	ENSTNIG00000004725	rtca	100	72.404	Tetraodon_nigroviridis
ENSPCOG00000005603	RTCA	94	91.837	ENSTBEG00000000943	RTCA	82	68.067	Tupaia_belangeri
ENSPCOG00000005603	RTCA	100	91.557	ENSTTRG00000015327	RTCA	100	91.557	Tursiops_truncatus
ENSPCOG00000005603	RTCA	92	97.917	ENSUAMG00000017265	RTCA	96	94.169	Ursus_americanus
ENSPCOG00000005603	RTCA	100	96.175	ENSUMAG00000007881	RTCA	100	96.175	Ursus_maritimus
ENSPCOG00000005603	RTCA	87	86.120	ENSVPAG00000001039	RTCA	84	86.120	Vicugna_pacos
ENSPCOG00000005603	RTCA	100	96.995	ENSVVUG00000022041	RTCA	68	96.995	Vulpes_vulpes
ENSPCOG00000005603	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSPCOG00000005603	RTCA	100	62.842	ENSXCOG00000008002	rtca	100	62.842	Xiphophorus_couchianus
ENSPCOG00000005603	RTCA	100	72.131	ENSXMAG00000005482	rtca	99	72.131	Xiphophorus_maculatus