EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000005666 (Gene tree)
Gene ID: 105823212
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 80765 bases
Position: chrKQ026623.1:4626835-4707599
Accession: 105823212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000001837	SpoU_methylase	PF00588.19	2.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000006438	TARBP1-201	4761	XM_012660362	ENSPCOP00000001837	1587 (aa)	XP_012515816	A0A2K6EJE2

Gene Model

Click here to download ENSPCOG00000005666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000005666's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000005666	TARBP1	100	86.305	ENSG00000059588	TARBP1	99	86.613	Homo_sapiens
ENSPCOG00000005666	TARBP1	99	40.442	ENSAPOG00000016419	si:dkey-85a20.4	85	43.548	Acanthochromis_polyacanthus
ENSPCOG00000005666	TARBP1	84	83.346	ENSAMEG00000003359	TARBP1	99	83.346	Ailuropoda_melanoleuca
ENSPCOG00000005666	TARBP1	99	41.098	ENSATEG00000020266	si:dkey-85a20.4	85	43.958	Anabas_testudineus
ENSPCOG00000005666	TARBP1	83	65.135	ENSAPLG00000007666	TARBP1	99	65.980	Anas_platyrhynchos
ENSPCOG00000005666	TARBP1	98	57.356	ENSACAG00000001142	TARBP1	98	56.231	Anolis_carolinensis
ENSPCOG00000005666	TARBP1	99	82.121	ENSBTAG00000004517	TARBP1	99	82.861	Bos_taurus
ENSPCOG00000005666	TARBP1	100	85.133	ENSCJAG00000018155	TARBP1	99	85.441	Callithrix_jacchus
ENSPCOG00000005666	TARBP1	88	83.624	ENSCAFG00000011533	TARBP1	99	83.686	Canis_familiaris
ENSPCOG00000005666	TARBP1	100	82.862	ENSCAFG00020027141	TARBP1	99	83.477	Canis_lupus_dingo
ENSPCOG00000005666	TARBP1	99	81.269	ENSCHIG00000011437	TARBP1	99	81.762	Capra_hircus
ENSPCOG00000005666	TARBP1	81	84.621	ENSTSYG00000010382	TARBP1	97	84.774	Carlito_syrichta
ENSPCOG00000005666	TARBP1	78	65.153	ENSCAPG00000010831	TARBP1	99	65.388	Cavia_aperea
ENSPCOG00000005666	TARBP1	99	74.583	ENSCPOG00000013995	TARBP1	99	73.964	Cavia_porcellus
ENSPCOG00000005666	TARBP1	100	85.441	ENSCCAG00000037278	TARBP1	99	86.058	Cebus_capucinus
ENSPCOG00000005666	TARBP1	99	86.235	ENSCATG00000011754	TARBP1	99	86.366	Cercocebus_atys
ENSPCOG00000005666	TARBP1	83	86.111	ENSCLAG00000003655	TARBP1	99	86.111	Chinchilla_lanigera
ENSPCOG00000005666	TARBP1	79	86.449	ENSCSAG00000010100	TARBP1	99	86.371	Chlorocebus_sabaeus
ENSPCOG00000005666	TARBP1	95	62.839	ENSCPBG00000005587	TARBP1	99	62.774	Chrysemys_picta_bellii
ENSPCOG00000005666	TARBP1	84	87.059	ENSCANG00000034343	TARBP1	99	86.985	Colobus_angolensis_palliatus
ENSPCOG00000005666	TARBP1	99	72.198	ENSCGRG00001016690	Tarbp1	99	71.827	Cricetulus_griseus_chok1gshd
ENSPCOG00000005666	TARBP1	90	73.540	ENSCGRG00000016893	Tarbp1	98	73.540	Cricetulus_griseus_crigri
ENSPCOG00000005666	TARBP1	99	38.513	ENSCSEG00000005255	si:dkey-85a20.4	86	45.212	Cynoglossus_semilaevis
ENSPCOG00000005666	TARBP1	87	43.115	ENSDARG00000079055	si:dkey-85a20.4	99	50.519	Danio_rerio
ENSPCOG00000005666	TARBP1	99	80.823	ENSDNOG00000008637	TARBP1	99	81.065	Dasypus_novemcinctus
ENSPCOG00000005666	TARBP1	80	71.550	ENSDORG00000007984	Tarbp1	100	71.550	Dipodomys_ordii
ENSPCOG00000005666	TARBP1	100	84.942	ENSEASG00005000252	TARBP1	99	84.904	Equus_asinus_asinus
ENSPCOG00000005666	TARBP1	100	85.318	ENSECAG00000023673	TARBP1	99	85.934	Equus_caballus
ENSPCOG00000005666	TARBP1	99	40.219	ENSELUG00000012193	si:dkey-85a20.4	86	42.807	Esox_lucius
ENSPCOG00000005666	TARBP1	100	82.059	ENSFCAG00000014183	TARBP1	99	82.251	Felis_catus
ENSPCOG00000005666	TARBP1	80	65.314	ENSFALG00000013565	TARBP1	99	65.118	Ficedula_albicollis
ENSPCOG00000005666	TARBP1	79	73.186	ENSFDAG00000001308	TARBP1	99	72.956	Fukomys_damarensis
ENSPCOG00000005666	TARBP1	85	53.740	ENSFHEG00000007565	si:dkey-85a20.4	77	53.740	Fundulus_heteroclitus
ENSPCOG00000005666	TARBP1	83	41.509	ENSGMOG00000004549	si:dkey-85a20.4	98	41.800	Gadus_morhua
ENSPCOG00000005666	TARBP1	96	62.111	ENSGALG00000011000	TARBP1	99	58.544	Gallus_gallus
ENSPCOG00000005666	TARBP1	94	41.169	ENSGAFG00000007387	si:dkey-85a20.4	85	43.201	Gambusia_affinis
ENSPCOG00000005666	TARBP1	85	43.191	ENSGACG00000005865	si:dkey-85a20.4	99	43.191	Gasterosteus_aculeatus
ENSPCOG00000005666	TARBP1	92	69.276	ENSGAGG00000012102	TARBP1	99	64.417	Gopherus_agassizii
ENSPCOG00000005666	TARBP1	84	83.685	ENSGGOG00000022879	TARBP1	99	83.904	Gorilla_gorilla
ENSPCOG00000005666	TARBP1	86	44.507	ENSHBUG00000008877	si:dkey-85a20.4	86	44.507	Haplochromis_burtoni
ENSPCOG00000005666	TARBP1	99	76.376	ENSHGLG00000011592	TARBP1	99	75.943	Heterocephalus_glaber_female
ENSPCOG00000005666	TARBP1	96	76.512	ENSHGLG00100015169	TARBP1	99	76.512	Heterocephalus_glaber_male
ENSPCOG00000005666	TARBP1	99	38.485	ENSIPUG00000005249	si:dkey-85a20.4	84	41.568	Ictalurus_punctatus
ENSPCOG00000005666	TARBP1	87	73.680	ENSSTOG00000032291	TARBP1	99	75.556	Ictidomys_tridecemlineatus
ENSPCOG00000005666	TARBP1	90	71.657	ENSJJAG00000017840	Tarbp1	99	71.657	Jaculus_jaculus
ENSPCOG00000005666	TARBP1	72	45.323	ENSKMAG00000017546	si:dkey-85a20.4	71	45.661	Kryptolebias_marmoratus
ENSPCOG00000005666	TARBP1	65	48.000	ENSLBEG00000012132	si:dkey-85a20.4	74	48.000	Labrus_bergylta
ENSPCOG00000005666	TARBP1	99	49.819	ENSLACG00000004337	TARBP1	99	49.398	Latimeria_chalumnae
ENSPCOG00000005666	TARBP1	99	44.484	ENSLOCG00000016214	si:dkey-85a20.4	85	48.264	Lepisosteus_oculatus
ENSPCOG00000005666	TARBP1	96	80.025	ENSLAFG00000011394	TARBP1	99	80.240	Loxodonta_africana
ENSPCOG00000005666	TARBP1	99	85.183	ENSMFAG00000041068	TARBP1	99	85.254	Macaca_fascicularis
ENSPCOG00000005666	TARBP1	99	85.714	ENSMMUG00000021703	TARBP1	99	85.847	Macaca_mulatta
ENSPCOG00000005666	TARBP1	99	86.296	ENSMNEG00000045002	TARBP1	99	86.428	Macaca_nemestrina
ENSPCOG00000005666	TARBP1	83	87.001	ENSMLEG00000044182	TARBP1	99	86.928	Mandrillus_leucophaeus
ENSPCOG00000005666	TARBP1	92	42.450	ENSMAMG00000021760	si:dkey-85a20.4	89	43.014	Mastacembelus_armatus
ENSPCOG00000005666	TARBP1	99	41.226	ENSMZEG00005005751	si:dkey-85a20.4	86	44.437	Maylandia_zebra
ENSPCOG00000005666	TARBP1	99	71.455	ENSMAUG00000020968	Tarbp1	99	71.084	Mesocricetus_auratus
ENSPCOG00000005666	TARBP1	100	83.695	ENSMICG00000015280	TARBP1	99	83.509	Microcebus_murinus
ENSPCOG00000005666	TARBP1	99	71.146	ENSMOCG00000004128	Tarbp1	99	70.836	Microtus_ochrogaster
ENSPCOG00000005666	TARBP1	99	39.988	ENSMMOG00000007795	si:dkey-85a20.4	85	43.084	Mola_mola
ENSPCOG00000005666	TARBP1	99	70.109	ENSMODG00000008504	TARBP1	99	70.048	Monodelphis_domestica
ENSPCOG00000005666	TARBP1	85	42.857	ENSMALG00000002916	si:dkey-85a20.4	85	43.144	Monopterus_albus
ENSPCOG00000005666	TARBP1	99	70.359	MGP_CAROLIEiJ_G0031729	Tarbp1	99	69.926	Mus_caroli
ENSPCOG00000005666	TARBP1	99	70.136	ENSMUSG00000090290	Tarbp1	99	70.012	Mus_musculus
ENSPCOG00000005666	TARBP1	99	70.686	MGP_PahariEiJ_G0023326	Tarbp1	99	70.254	Mus_pahari
ENSPCOG00000005666	TARBP1	99	70.384	MGP_SPRETEiJ_G0032846	Tarbp1	99	70.260	Mus_spretus
ENSPCOG00000005666	TARBP1	76	80.403	ENSMPUG00000002802	TARBP1	99	80.161	Mustela_putorius_furo
ENSPCOG00000005666	TARBP1	84	71.676	ENSMLUG00000002414	TARBP1	99	71.948	Myotis_lucifugus
ENSPCOG00000005666	TARBP1	100	86.243	ENSNLEG00000002518	TARBP1	99	86.675	Nomascus_leucogenys
ENSPCOG00000005666	TARBP1	66	75.289	ENSMEUG00000011370	-	65	75.115	Notamacropus_eugenii
ENSPCOG00000005666	TARBP1	74	81.752	ENSOPRG00000013822	TARBP1	71	81.752	Ochotona_princeps
ENSPCOG00000005666	TARBP1	99	72.294	ENSODEG00000005238	TARBP1	99	70.996	Octodon_degus
ENSPCOG00000005666	TARBP1	85	44.138	ENSONIG00000009789	si:dkey-85a20.4	99	44.138	Oreochromis_niloticus
ENSPCOG00000005666	TARBP1	99	83.066	ENSOCUG00000017418	TARBP1	99	82.818	Oryctolagus_cuniculus
ENSPCOG00000005666	TARBP1	99	39.303	ENSORLG00000010529	si:dkey-85a20.4	85	42.256	Oryzias_latipes
ENSPCOG00000005666	TARBP1	99	38.999	ENSORLG00020019264	si:dkey-85a20.4	85	42.006	Oryzias_latipes_hni
ENSPCOG00000005666	TARBP1	99	39.193	ENSORLG00015003276	si:dkey-85a20.4	85	42.113	Oryzias_latipes_hsok
ENSPCOG00000005666	TARBP1	100	84.002	ENSOGAG00000002379	TARBP1	99	83.879	Otolemur_garnettii
ENSPCOG00000005666	TARBP1	92	85.185	ENSOARG00000003434	TARBP1	99	82.090	Ovis_aries
ENSPCOG00000005666	TARBP1	84	86.867	ENSPPAG00000028097	TARBP1	99	87.234	Pan_paniscus
ENSPCOG00000005666	TARBP1	95	86.420	ENSPPRG00000013561	TARBP1	99	72.811	Panthera_pardus
ENSPCOG00000005666	TARBP1	83	83.010	ENSPTIG00000009281	TARBP1	99	83.171	Panthera_tigris_altaica
ENSPCOG00000005666	TARBP1	100	85.952	ENSPTRG00000002124	TARBP1	99	86.322	Pan_troglodytes
ENSPCOG00000005666	TARBP1	99	86.235	ENSPANG00000021933	TARBP1	99	86.366	Papio_anubis
ENSPCOG00000005666	TARBP1	99	41.756	ENSPKIG00000016716	si:dkey-85a20.4	85	44.944	Paramormyrops_kingsleyae
ENSPCOG00000005666	TARBP1	79	67.237	ENSPSIG00000010699	TARBP1	99	67.237	Pelodiscus_sinensis
ENSPCOG00000005666	TARBP1	97	73.783	ENSPEMG00000006888	Tarbp1	99	73.783	Peromyscus_maniculatus_bairdii
ENSPCOG00000005666	TARBP1	91	83.333	ENSPCIG00000029710	TARBP1	99	83.333	Phascolarctos_cinereus
ENSPCOG00000005666	TARBP1	85	43.099	ENSPFOG00000013020	si:dkey-85a20.4	99	43.169	Poecilia_formosa
ENSPCOG00000005666	TARBP1	85	43.199	ENSPLAG00000006044	si:dkey-85a20.4	85	43.270	Poecilia_latipinna
ENSPCOG00000005666	TARBP1	91	41.749	ENSPMEG00000017857	si:dkey-85a20.4	85	43.270	Poecilia_mexicana
ENSPCOG00000005666	TARBP1	93	41.613	ENSPREG00000022753	si:dkey-85a20.4	85	43.481	Poecilia_reticulata
ENSPCOG00000005666	TARBP1	91	87.082	ENSPPYG00000000102	TARBP1	99	87.534	Pongo_abelii
ENSPCOG00000005666	TARBP1	88	74.294	ENSPCAG00000004808	TARBP1	88	74.878	Procavia_capensis
ENSPCOG00000005666	TARBP1	99	66.111	ENSPVAG00000014798	TARBP1	99	66.667	Pteropus_vampyrus
ENSPCOG00000005666	TARBP1	99	40.278	ENSPNYG00000019135	si:dkey-85a20.4	85	43.201	Pundamilia_nyererei
ENSPCOG00000005666	TARBP1	99	66.708	ENSRNOG00000053574	Tarbp1	99	66.088	Rattus_norvegicus
ENSPCOG00000005666	TARBP1	99	81.237	ENSRBIG00000043362	TARBP1	99	84.375	Rhinopithecus_bieti
ENSPCOG00000005666	TARBP1	100	82.295	ENSRROG00000029527	TARBP1	99	82.480	Rhinopithecus_roxellana
ENSPCOG00000005666	TARBP1	91	84.929	ENSSBOG00000034503	TARBP1	99	84.857	Saimiri_boliviensis_boliviensis
ENSPCOG00000005666	TARBP1	83	72.889	ENSSHAG00000000013	TARBP1	99	72.889	Sarcophilus_harrisii
ENSPCOG00000005666	TARBP1	84	43.300	ENSSFOG00015002660	si:dkey-85a20.4	98	44.305	Scleropages_formosus
ENSPCOG00000005666	TARBP1	91	42.913	ENSSMAG00000007081	si:dkey-85a20.4	88	43.645	Scophthalmus_maximus
ENSPCOG00000005666	TARBP1	92	41.226	ENSSDUG00000023566	si:dkey-85a20.4	85	42.928	Seriola_dumerili
ENSPCOG00000005666	TARBP1	99	41.437	ENSSLDG00000020200	si:dkey-85a20.4	86	44.601	Seriola_lalandi_dorsalis
ENSPCOG00000005666	TARBP1	90	85.023	ENSSARG00000012207	TARBP1	89	85.023	Sorex_araneus
ENSPCOG00000005666	TARBP1	99	62.354	ENSSPUG00000015364	TARBP1	99	62.416	Sphenodon_punctatus
ENSPCOG00000005666	TARBP1	92	42.371	ENSSPAG00000007213	si:dkey-85a20.4	88	43.210	Stegastes_partitus
ENSPCOG00000005666	TARBP1	100	83.714	ENSSSCG00000010160	TARBP1	99	83.723	Sus_scrofa
ENSPCOG00000005666	TARBP1	80	64.859	ENSTGUG00000010214	TARBP1	100	64.859	Taeniopygia_guttata
ENSPCOG00000005666	TARBP1	94	38.889	ENSTNIG00000016586	si:dkey-85a20.4	99	43.137	Tetraodon_nigroviridis
ENSPCOG00000005666	TARBP1	87	90.370	ENSTTRG00000008707	TARBP1	92	90.370	Tursiops_truncatus
ENSPCOG00000005666	TARBP1	82	82.831	ENSUMAG00000006730	TARBP1	99	82.831	Ursus_maritimus
ENSPCOG00000005666	TARBP1	79	92.784	ENSVPAG00000007665	TARBP1	86	92.784	Vicugna_pacos
ENSPCOG00000005666	TARBP1	85	84.153	ENSVVUG00000007460	TARBP1	97	84.153	Vulpes_vulpes
ENSPCOG00000005666	TARBP1	84	53.571	ENSXETG00000016224	tarbp1	99	53.538	Xenopus_tropicalis
ENSPCOG00000005666	TARBP1	78	47.514	ENSXCOG00000011779	si:dkey-85a20.4	93	47.658	Xiphophorus_couchianus
ENSPCOG00000005666	TARBP1	64	41.674	ENSXMAG00000009600	si:dkey-85a20.4	100	41.767	Xiphophorus_maculatus