EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000008653 (Gene tree)
Gene ID: 105807939
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 6371 bases
Position: chrKQ020047.1:3623851-3630221
Accession: 105807939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000002837	zf-CCCH	PF00642.24	1.7e-06	1	1
ENSPCOP00000002836	zf-CCCH	PF00642.24	1.8e-06	1	1
ENSPCOP00000002836	TRM	PF02005.16	9.1e-149	1	1
ENSPCOP00000002837	TRM	PF02005.16	2.5e-140	1	1
ENSPCOP00000002837	Met_10	PF02475.16	1.2e-06	1	1
ENSPCOP00000002836	Met_10	PF02475.16	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000009824	TRMT1-201	1980	XM_012641463	ENSPCOP00000002836	659 (aa)	XP_012496917	A0A2K6EM78
ENSPCOT00000009829	TRMT1-202	1893	-	ENSPCOP00000002837	630 (aa)	-	A0A2K6EM85

Gene Model

Click here to download ENSPCOG00000008653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000008653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000008653	TRMT1	98	92.224	ENSG00000104907	TRMT1	100	96.335	Homo_sapiens
ENSPCOG00000008653	TRMT1	99	87.994	ENSAMEG00000012598	TRMT1	98	87.994	Ailuropoda_melanoleuca
ENSPCOG00000008653	TRMT1	87	59.408	ENSACIG00000018680	trmt1	88	59.408	Amphilophus_citrinellus
ENSPCOG00000008653	TRMT1	87	65.799	ENSAOCG00000006781	trmt1	86	65.799	Amphiprion_ocellaris
ENSPCOG00000008653	TRMT1	87	65.799	ENSAPEG00000007712	trmt1	86	65.799	Amphiprion_percula
ENSPCOG00000008653	TRMT1	87	68.118	ENSATEG00000001872	trmt1	84	68.118	Anabas_testudineus
ENSPCOG00000008653	TRMT1	90	66.555	ENSACAG00000003825	TRMT1	96	66.555	Anolis_carolinensis
ENSPCOG00000008653	TRMT1	98	87.037	ENSANAG00000023016	TRMT1	99	89.627	Aotus_nancymaae
ENSPCOG00000008653	TRMT1	87	64.685	ENSACLG00000010073	trmt1	92	64.685	Astatotilapia_calliptera
ENSPCOG00000008653	TRMT1	87	67.647	ENSAMXG00000012026	trmt1	85	67.647	Astyanax_mexicanus
ENSPCOG00000008653	TRMT1	99	86.850	ENSBTAG00000019325	TRMT1	93	86.850	Bos_taurus
ENSPCOG00000008653	TRMT1	80	40.706	WBGene00006613	trm-1	98	38.798	Caenorhabditis_elegans
ENSPCOG00000008653	TRMT1	98	86.935	ENSCJAG00000004566	TRMT1	99	86.935	Callithrix_jacchus
ENSPCOG00000008653	TRMT1	99	89.008	ENSCAFG00000017070	TRMT1	99	89.308	Canis_familiaris
ENSPCOG00000008653	TRMT1	99	89.297	ENSCAFG00020005397	TRMT1	99	89.297	Canis_lupus_dingo
ENSPCOG00000008653	TRMT1	99	86.718	ENSCHIG00000013569	TRMT1	99	86.718	Capra_hircus
ENSPCOG00000008653	TRMT1	97	85.537	ENSTSYG00000003207	TRMT1	99	85.366	Carlito_syrichta
ENSPCOG00000008653	TRMT1	85	81.051	ENSCAPG00000003355	TRMT1	98	81.051	Cavia_aperea
ENSPCOG00000008653	TRMT1	98	83.282	ENSCPOG00000011754	TRMT1	97	83.282	Cavia_porcellus
ENSPCOG00000008653	TRMT1	98	86.016	ENSCCAG00000022263	TRMT1	99	87.500	Cebus_capucinus
ENSPCOG00000008653	TRMT1	87	74.745	ENSCATG00000038220	-	99	74.745	Cercocebus_atys
ENSPCOG00000008653	TRMT1	99	91.743	ENSCATG00000039850	TRMT1	99	91.743	Cercocebus_atys
ENSPCOG00000008653	TRMT1	97	86.427	ENSCLAG00000015295	TRMT1	99	82.862	Chinchilla_lanigera
ENSPCOG00000008653	TRMT1	79	92.529	ENSCSAG00000006500	TRMT1	98	92.529	Chlorocebus_sabaeus
ENSPCOG00000008653	TRMT1	95	66.044	ENSCPBG00000023866	TRMT1	94	66.667	Chrysemys_picta_bellii
ENSPCOG00000008653	TRMT1	85	44.965	ENSCING00000002884	-	99	44.965	Ciona_intestinalis
ENSPCOG00000008653	TRMT1	83	46.029	ENSCSAVG00000010927	-	100	45.191	Ciona_savignyi
ENSPCOG00000008653	TRMT1	95	71.019	ENSCANG00000031650	-	98	71.139	Colobus_angolensis_palliatus
ENSPCOG00000008653	TRMT1	99	75.076	ENSCANG00000040631	TRMT1	99	75.076	Colobus_angolensis_palliatus
ENSPCOG00000008653	TRMT1	97	84.772	ENSCGRG00001022594	Trmt1	99	82.512	Cricetulus_griseus_chok1gshd
ENSPCOG00000008653	TRMT1	97	84.772	ENSCGRG00000017732	Trmt1	99	82.512	Cricetulus_griseus_crigri
ENSPCOG00000008653	TRMT1	87	66.434	ENSCSEG00000001643	trmt1	84	68.288	Cynoglossus_semilaevis
ENSPCOG00000008653	TRMT1	87	67.250	ENSCVAG00000011886	trmt1	85	67.250	Cyprinodon_variegatus
ENSPCOG00000008653	TRMT1	87	66.379	ENSDARG00000010978	trmt1	85	66.552	Danio_rerio
ENSPCOG00000008653	TRMT1	84	62.143	ENSDNOG00000048240	-	95	62.143	Dasypus_novemcinctus
ENSPCOG00000008653	TRMT1	99	83.792	ENSDORG00000014298	Trmt1	99	83.792	Dipodomys_ordii
ENSPCOG00000008653	TRMT1	79	47.925	FBgn0032430	CG6388	89	47.925	Drosophila_melanogaster
ENSPCOG00000008653	TRMT1	57	82.807	ENSETEG00000015483	-	54	82.807	Echinops_telfairi
ENSPCOG00000008653	TRMT1	78	53.216	ENSEBUG00000003449	trmt1	74	53.550	Eptatretus_burgeri
ENSPCOG00000008653	TRMT1	95	87.801	ENSEASG00005004050	TRMT1	99	87.421	Equus_asinus_asinus
ENSPCOG00000008653	TRMT1	95	88.122	ENSECAG00000016149	TRMT1	99	87.736	Equus_caballus
ENSPCOG00000008653	TRMT1	60	72.292	ENSEEUG00000014102	-	100	72.292	Erinaceus_europaeus
ENSPCOG00000008653	TRMT1	87	64.931	ENSELUG00000021659	trmt1	85	64.931	Esox_lucius
ENSPCOG00000008653	TRMT1	100	88.413	ENSFCAG00000000483	TRMT1	100	88.413	Felis_catus
ENSPCOG00000008653	TRMT1	99	84.640	ENSFDAG00000007386	TRMT1	99	84.640	Fukomys_damarensis
ENSPCOG00000008653	TRMT1	85	65.536	ENSFHEG00000012865	trmt1	85	69.515	Fundulus_heteroclitus
ENSPCOG00000008653	TRMT1	87	60.209	ENSGMOG00000006564	trmt1	98	60.733	Gadus_morhua
ENSPCOG00000008653	TRMT1	87	67.483	ENSGAFG00000011862	trmt1	88	68.140	Gambusia_affinis
ENSPCOG00000008653	TRMT1	89	63.051	ENSGACG00000000227	trmt1	94	63.390	Gasterosteus_aculeatus
ENSPCOG00000008653	TRMT1	93	67.700	ENSGAGG00000016432	TRMT1	89	67.700	Gopherus_agassizii
ENSPCOG00000008653	TRMT1	99	92.073	ENSGGOG00000014007	TRMT1	99	92.344	Gorilla_gorilla
ENSPCOG00000008653	TRMT1	88	57.388	ENSHBUG00000008821	trmt1	95	57.388	Haplochromis_burtoni
ENSPCOG00000008653	TRMT1	98	85.759	ENSHGLG00000015972	TRMT1	98	85.759	Heterocephalus_glaber_female
ENSPCOG00000008653	TRMT1	98	80.227	ENSHGLG00100018112	TRMT1	98	80.227	Heterocephalus_glaber_male
ENSPCOG00000008653	TRMT1	87	63.525	ENSHCOG00000009447	trmt1	88	63.525	Hippocampus_comes
ENSPCOG00000008653	TRMT1	88	65.327	ENSIPUG00000002899	trmt1	86	65.378	Ictalurus_punctatus
ENSPCOG00000008653	TRMT1	99	88.658	ENSSTOG00000012531	TRMT1	99	88.658	Ictidomys_tridecemlineatus
ENSPCOG00000008653	TRMT1	94	85.000	ENSJJAG00000017154	Trmt1	99	83.227	Jaculus_jaculus
ENSPCOG00000008653	TRMT1	87	67.601	ENSKMAG00000011809	trmt1	98	64.548	Kryptolebias_marmoratus
ENSPCOG00000008653	TRMT1	87	66.958	ENSLBEG00000012703	trmt1	84	66.958	Labrus_bergylta
ENSPCOG00000008653	TRMT1	90	56.397	ENSLACG00000014585	TRMT1	94	56.397	Latimeria_chalumnae
ENSPCOG00000008653	TRMT1	87	62.671	ENSLOCG00000006479	trmt1	97	63.448	Lepisosteus_oculatus
ENSPCOG00000008653	TRMT1	95	89.809	ENSLAFG00000014072	TRMT1	97	89.809	Loxodonta_africana
ENSPCOG00000008653	TRMT1	99	91.896	ENSMFAG00000033143	TRMT1	99	91.896	Macaca_fascicularis
ENSPCOG00000008653	TRMT1	99	87.680	ENSMMUG00000001167	TRMT1	99	87.680	Macaca_mulatta
ENSPCOG00000008653	TRMT1	99	91.896	ENSMNEG00000037867	TRMT1	99	91.896	Macaca_nemestrina
ENSPCOG00000008653	TRMT1	100	91.270	ENSMLEG00000016142	TRMT1	100	91.270	Mandrillus_leucophaeus
ENSPCOG00000008653	TRMT1	94	63.651	ENSMAMG00000004357	trmt1	94	63.651	Mastacembelus_armatus
ENSPCOG00000008653	TRMT1	87	65.035	ENSMZEG00005014510	trmt1	85	65.035	Maylandia_zebra
ENSPCOG00000008653	TRMT1	97	83.489	ENSMAUG00000011134	Trmt1	99	82.344	Mesocricetus_auratus
ENSPCOG00000008653	TRMT1	99	96.483	ENSMICG00000000793	TRMT1	99	96.483	Microcebus_murinus
ENSPCOG00000008653	TRMT1	97	84.219	ENSMOCG00000015895	Trmt1	99	82.979	Microtus_ochrogaster
ENSPCOG00000008653	TRMT1	87	65.849	ENSMMOG00000011097	trmt1	92	65.849	Mola_mola
ENSPCOG00000008653	TRMT1	94	74.637	ENSMODG00000011619	TRMT1	99	74.637	Monodelphis_domestica
ENSPCOG00000008653	TRMT1	99	83.587	MGP_CAROLIEiJ_G0031304	Trmt1	99	83.587	Mus_caroli
ENSPCOG00000008653	TRMT1	99	82.979	ENSMUSG00000001909	Trmt1	99	82.979	Mus_musculus
ENSPCOG00000008653	TRMT1	99	82.979	MGP_SPRETEiJ_G0032422	Trmt1	99	82.979	Mus_spretus
ENSPCOG00000008653	TRMT1	99	88.226	ENSMPUG00000004210	TRMT1	94	88.226	Mustela_putorius_furo
ENSPCOG00000008653	TRMT1	99	88.055	ENSMLUG00000012809	TRMT1	97	88.055	Myotis_lucifugus
ENSPCOG00000008653	TRMT1	98	83.462	ENSNGAG00000022486	Trmt1	98	83.462	Nannospalax_galili
ENSPCOG00000008653	TRMT1	75	69.254	ENSNBRG00000024376	trmt1	85	69.254	Neolamprologus_brichardi
ENSPCOG00000008653	TRMT1	84	91.369	ENSNLEG00000013019	-	99	91.369	Nomascus_leucogenys
ENSPCOG00000008653	TRMT1	90	75.798	ENSMEUG00000013756	TRMT1	99	75.798	Notamacropus_eugenii
ENSPCOG00000008653	TRMT1	82	86.292	ENSOPRG00000009471	-	82	86.292	Ochotona_princeps
ENSPCOG00000008653	TRMT1	98	85.271	ENSODEG00000010323	TRMT1	98	85.271	Octodon_degus
ENSPCOG00000008653	TRMT1	94	64.263	ENSONIG00000000400	trmt1	99	64.263	Oreochromis_niloticus
ENSPCOG00000008653	TRMT1	79	89.655	ENSOCUG00000021934	TRMT1	98	89.655	Oryctolagus_cuniculus
ENSPCOG00000008653	TRMT1	87	63.040	ENSORLG00000020074	trmt1	90	63.040	Oryzias_latipes
ENSPCOG00000008653	TRMT1	87	65.909	ENSORLG00020007561	trmt1	89	65.734	Oryzias_latipes_hni
ENSPCOG00000008653	TRMT1	87	66.084	ENSORLG00015006547	trmt1	86	66.084	Oryzias_latipes_hsok
ENSPCOG00000008653	TRMT1	87	66.434	ENSOMEG00000019343	trmt1	86	66.434	Oryzias_melastigma
ENSPCOG00000008653	TRMT1	96	89.241	ENSOGAG00000025576	TRMT1	99	89.399	Otolemur_garnettii
ENSPCOG00000008653	TRMT1	99	74.086	ENSOARG00000009397	TRMT1	93	73.209	Ovis_aries
ENSPCOG00000008653	TRMT1	99	80.615	ENSPPRG00000012117	TRMT1	100	80.645	Panthera_pardus
ENSPCOG00000008653	TRMT1	81	90.634	ENSPTIG00000008833	TRMT1	97	90.881	Panthera_tigris_altaica
ENSPCOG00000008653	TRMT1	98	92.224	ENSPTRG00000010557	TRMT1	99	92.185	Pan_troglodytes
ENSPCOG00000008653	TRMT1	99	68.971	ENSPTRG00000050421	-	99	68.971	Pan_troglodytes
ENSPCOG00000008653	TRMT1	85	76.151	ENSPANG00000034058	-	96	76.151	Papio_anubis
ENSPCOG00000008653	TRMT1	99	92.000	ENSPANG00000009247	TRMT1	99	92.000	Papio_anubis
ENSPCOG00000008653	TRMT1	87	68.293	ENSPKIG00000005309	trmt1	84	68.293	Paramormyrops_kingsleyae
ENSPCOG00000008653	TRMT1	86	60.420	ENSPSIG00000008762	TRMT1	81	60.420	Pelodiscus_sinensis
ENSPCOG00000008653	TRMT1	93	63.622	ENSPMGG00000019764	trmt1	96	63.622	Periophthalmus_magnuspinnatus
ENSPCOG00000008653	TRMT1	97	86.371	ENSPEMG00000016247	Trmt1	99	84.579	Peromyscus_maniculatus_bairdii
ENSPCOG00000008653	TRMT1	87	60.140	ENSPMAG00000004329	trmt1	89	60.140	Petromyzon_marinus
ENSPCOG00000008653	TRMT1	97	73.107	ENSPCIG00000019273	TRMT1	99	73.107	Phascolarctos_cinereus
ENSPCOG00000008653	TRMT1	93	65.316	ENSPFOG00000008527	trmt1	95	65.316	Poecilia_formosa
ENSPCOG00000008653	TRMT1	93	64.992	ENSPLAG00000018788	trmt1	96	66.490	Poecilia_latipinna
ENSPCOG00000008653	TRMT1	93	65.154	ENSPMEG00000013120	trmt1	95	65.154	Poecilia_mexicana
ENSPCOG00000008653	TRMT1	87	67.657	ENSPREG00000000211	trmt1	85	67.832	Poecilia_reticulata
ENSPCOG00000008653	TRMT1	98	92.535	ENSPPYG00000009622	TRMT1	99	92.226	Pongo_abelii
ENSPCOG00000008653	TRMT1	99	80.000	ENSPCAG00000003698	TRMT1	99	80.000	Procavia_capensis
ENSPCOG00000008653	TRMT1	99	88.532	ENSPVAG00000015076	TRMT1	99	88.532	Pteropus_vampyrus
ENSPCOG00000008653	TRMT1	87	63.462	ENSPNYG00000013960	trmt1	92	63.462	Pundamilia_nyererei
ENSPCOG00000008653	TRMT1	81	68.607	ENSPNAG00000024859	trmt1	88	68.607	Pygocentrus_nattereri
ENSPCOG00000008653	TRMT1	97	83.906	ENSRNOG00000002914	Trmt1	99	83.906	Rattus_norvegicus
ENSPCOG00000008653	TRMT1	99	91.437	ENSRBIG00000038324	TRMT1	99	91.437	Rhinopithecus_bieti
ENSPCOG00000008653	TRMT1	95	71.542	ENSRBIG00000037505	-	99	71.495	Rhinopithecus_bieti
ENSPCOG00000008653	TRMT1	95	70.906	ENSRROG00000031847	-	98	70.872	Rhinopithecus_roxellana
ENSPCOG00000008653	TRMT1	99	91.284	ENSRROG00000028599	TRMT1	99	91.284	Rhinopithecus_roxellana
ENSPCOG00000008653	TRMT1	77	36.822	YDR120C	-	92	37.313	Saccharomyces_cerevisiae
ENSPCOG00000008653	TRMT1	99	85.875	ENSSBOG00000028861	TRMT1	99	88.149	Saimiri_boliviensis_boliviensis
ENSPCOG00000008653	TRMT1	92	76.033	ENSSHAG00000014381	TRMT1	100	74.759	Sarcophilus_harrisii
ENSPCOG00000008653	TRMT1	87	67.888	ENSSFOG00015004139	trmt1	84	67.888	Scleropages_formosus
ENSPCOG00000008653	TRMT1	87	66.899	ENSSMAG00000021136	trmt1	85	66.899	Scophthalmus_maximus
ENSPCOG00000008653	TRMT1	87	67.133	ENSSDUG00000012740	trmt1	84	67.133	Seriola_dumerili
ENSPCOG00000008653	TRMT1	87	67.308	ENSSLDG00000005971	trmt1	84	67.308	Seriola_lalandi_dorsalis
ENSPCOG00000008653	TRMT1	85	83.659	ENSSARG00000005138	TRMT1	99	83.659	Sorex_araneus
ENSPCOG00000008653	TRMT1	87	54.310	ENSSPUG00000001084	TRMT1	90	54.655	Sphenodon_punctatus
ENSPCOG00000008653	TRMT1	87	64.471	ENSSPAG00000007153	trmt1	94	64.471	Stegastes_partitus
ENSPCOG00000008653	TRMT1	97	89.325	ENSSSCG00000013744	TRMT1	99	89.325	Sus_scrofa
ENSPCOG00000008653	TRMT1	85	63.093	ENSTRUG00000010700	trmt1	85	63.269	Takifugu_rubripes
ENSPCOG00000008653	TRMT1	87	66.667	ENSTNIG00000018808	trmt1	98	66.667	Tetraodon_nigroviridis
ENSPCOG00000008653	TRMT1	98	85.294	ENSTTRG00000006379	TRMT1	100	84.977	Tursiops_truncatus
ENSPCOG00000008653	TRMT1	99	88.103	ENSUAMG00000022911	TRMT1	99	88.103	Ursus_americanus
ENSPCOG00000008653	TRMT1	97	88.050	ENSUMAG00000006027	TRMT1	99	88.050	Ursus_maritimus
ENSPCOG00000008653	TRMT1	99	89.008	ENSVVUG00000024177	TRMT1	99	89.008	Vulpes_vulpes
ENSPCOG00000008653	TRMT1	70	71.800	ENSXETG00000033863	TRMT1	92	71.800	Xenopus_tropicalis
ENSPCOG00000008653	TRMT1	90	65.997	ENSXCOG00000015733	trmt1	92	66.164	Xiphophorus_couchianus
ENSPCOG00000008653	TRMT1	87	67.478	ENSXMAG00000013823	trmt1	98	67.652	Xiphophorus_maculatus