EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000009611 (Gene tree)
Gene ID: 105817250
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 73627 bases
Position: chrKQ023770.1:2963834-3037460
Accession: 105817250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000003182	RTC	PF01137.21	3.5e-61	1	1
ENSPCOP00000003191	RTC	PF01137.21	2.2e-07	1	1
ENSPCOP00000003182	RTC_insert	PF05189.13	6.5e-37	1	1
ENSPCOP00000003191	RTC_insert	PF05189.13	9.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000010926	RCL1-201	2202	XM_012652883	ENSPCOP00000003182	373 (aa)	XP_012508337	A0A2K6EN66
ENSPCOT00000010936	RCL1-202	1688	XM_012652884	ENSPCOP00000003191	187 (aa)	XP_012508338	A0A2K6ENA1

Gene Model

Click here to download ENSPCOG00000009611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000009611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000009611	RCL1	100	98.396	ENSG00000120158	RCL1	100	99.070	Homo_sapiens
ENSPCOG00000009611	RCL1	97	82.418	ENSAPOG00000015666	rcl1	100	79.144	Acanthochromis_polyacanthus
ENSPCOG00000009611	RCL1	100	97.051	ENSAMEG00000002631	RCL1	100	97.051	Ailuropoda_melanoleuca
ENSPCOG00000009611	RCL1	97	82.418	ENSACIG00000021195	rcl1	99	79.459	Amphilophus_citrinellus
ENSPCOG00000009611	RCL1	100	78.610	ENSAOCG00000002223	rcl1	100	78.610	Amphiprion_ocellaris
ENSPCOG00000009611	RCL1	100	78.877	ENSAPEG00000006905	rcl1	100	78.877	Amphiprion_percula
ENSPCOG00000009611	RCL1	99	77.297	ENSATEG00000020026	rcl1	99	77.297	Anabas_testudineus
ENSPCOG00000009611	RCL1	97	86.740	ENSAPLG00000006031	RCL1	100	87.195	Anas_platyrhynchos
ENSPCOG00000009611	RCL1	100	85.523	ENSACAG00000003640	RCL1	100	85.523	Anolis_carolinensis
ENSPCOG00000009611	RCL1	100	97.319	ENSANAG00000037372	RCL1	100	97.319	Aotus_nancymaae
ENSPCOG00000009611	RCL1	97	82.967	ENSACLG00000021724	rcl1	99	79.459	Astatotilapia_calliptera
ENSPCOG00000009611	RCL1	97	80.769	ENSAMXG00000033394	rcl1	99	78.804	Astyanax_mexicanus
ENSPCOG00000009611	RCL1	99	47.368	WBGene00022852	ZK1127.5	99	47.368	Caenorhabditis_elegans
ENSPCOG00000009611	RCL1	100	98.123	ENSCJAG00000011202	RCL1	100	98.123	Callithrix_jacchus
ENSPCOG00000009611	RCL1	100	95.979	ENSCAFG00000002091	RCL1	100	95.979	Canis_familiaris
ENSPCOG00000009611	RCL1	100	95.979	ENSCAFG00020000638	RCL1	78	95.979	Canis_lupus_dingo
ENSPCOG00000009611	RCL1	100	95.979	ENSCHIG00000012407	RCL1	100	95.979	Capra_hircus
ENSPCOG00000009611	RCL1	100	97.861	ENSTSYG00000009592	RCL1	100	97.861	Carlito_syrichta
ENSPCOG00000009611	RCL1	68	81.503	ENSCAPG00000013575	RCL1	100	81.503	Cavia_aperea
ENSPCOG00000009611	RCL1	100	98.123	ENSCPOG00000015354	RCL1	100	98.123	Cavia_porcellus
ENSPCOG00000009611	RCL1	100	98.123	ENSCCAG00000033505	RCL1	100	98.123	Cebus_capucinus
ENSPCOG00000009611	RCL1	100	97.861	ENSCATG00000034721	RCL1	100	97.861	Cercocebus_atys
ENSPCOG00000009611	RCL1	100	96.515	ENSCLAG00000007445	RCL1	100	96.515	Chinchilla_lanigera
ENSPCOG00000009611	RCL1	100	97.855	ENSCSAG00000008811	RCL1	100	97.855	Chlorocebus_sabaeus
ENSPCOG00000009611	RCL1	87	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSPCOG00000009611	RCL1	100	89.812	ENSCPBG00000025481	RCL1	94	90.274	Chrysemys_picta_bellii
ENSPCOG00000009611	RCL1	98	58.919	ENSCING00000019565	-	98	58.919	Ciona_intestinalis
ENSPCOG00000009611	RCL1	100	98.123	ENSCANG00000027099	RCL1	100	98.123	Colobus_angolensis_palliatus
ENSPCOG00000009611	RCL1	100	95.710	ENSCGRG00001013748	Rcl1	100	95.710	Cricetulus_griseus_chok1gshd
ENSPCOG00000009611	RCL1	97	95.028	ENSCGRG00000005843	Rcl1	99	96.037	Cricetulus_griseus_crigri
ENSPCOG00000009611	RCL1	97	81.868	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
ENSPCOG00000009611	RCL1	97	82.967	ENSCVAG00000011536	rcl1	99	80.811	Cyprinodon_variegatus
ENSPCOG00000009611	RCL1	97	81.319	ENSDARG00000038312	rcl1	100	76.839	Danio_rerio
ENSPCOG00000009611	RCL1	97	97.238	ENSDNOG00000019911	RCL1	100	97.358	Dasypus_novemcinctus
ENSPCOG00000009611	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSPCOG00000009611	RCL1	99	54.233	FBgn0020909	Rtc1	98	54.233	Drosophila_melanogaster
ENSPCOG00000009611	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSPCOG00000009611	RCL1	98	54.348	ENSEBUG00000016621	-	98	54.348	Eptatretus_burgeri
ENSPCOG00000009611	RCL1	100	97.855	ENSEASG00005010653	RCL1	100	97.855	Equus_asinus_asinus
ENSPCOG00000009611	RCL1	100	97.855	ENSECAG00000015973	RCL1	100	97.855	Equus_caballus
ENSPCOG00000009611	RCL1	100	82.038	ENSEEUG00000009801	RCL1	100	82.038	Erinaceus_europaeus
ENSPCOG00000009611	RCL1	100	76.471	ENSELUG00000007353	rcl1	100	76.471	Esox_lucius
ENSPCOG00000009611	RCL1	100	95.174	ENSFCAG00000014557	RCL1	100	95.174	Felis_catus
ENSPCOG00000009611	RCL1	97	86.188	ENSFALG00000010553	RCL1	94	82.254	Ficedula_albicollis
ENSPCOG00000009611	RCL1	97	95.580	ENSFDAG00000004209	RCL1	100	96.024	Fukomys_damarensis
ENSPCOG00000009611	RCL1	97	82.967	ENSFHEG00000011228	rcl1	99	80.270	Fundulus_heteroclitus
ENSPCOG00000009611	RCL1	97	80.769	ENSGMOG00000004677	rcl1	99	78.108	Gadus_morhua
ENSPCOG00000009611	RCL1	99	86.179	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSPCOG00000009611	RCL1	99	78.919	ENSGAFG00000007257	rcl1	99	78.919	Gambusia_affinis
ENSPCOG00000009611	RCL1	100	77.807	ENSGACG00000017474	rcl1	100	77.807	Gasterosteus_aculeatus
ENSPCOG00000009611	RCL1	100	89.812	ENSGAGG00000003689	RCL1	100	89.812	Gopherus_agassizii
ENSPCOG00000009611	RCL1	100	97.861	ENSGGOG00000015041	RCL1	100	97.861	Gorilla_gorilla
ENSPCOG00000009611	RCL1	97	83.516	ENSHBUG00000001393	rcl1	99	79.730	Haplochromis_burtoni
ENSPCOG00000009611	RCL1	100	96.515	ENSHGLG00000016452	RCL1	100	96.515	Heterocephalus_glaber_female
ENSPCOG00000009611	RCL1	97	86.740	ENSHGLG00000005368	-	100	80.161	Heterocephalus_glaber_female
ENSPCOG00000009611	RCL1	98	85.870	ENSHGLG00100018010	-	100	80.965	Heterocephalus_glaber_male
ENSPCOG00000009611	RCL1	97	95.580	ENSHGLG00100008718	-	100	89.544	Heterocephalus_glaber_male
ENSPCOG00000009611	RCL1	97	80.769	ENSHCOG00000020170	rcl1	99	78.378	Hippocampus_comes
ENSPCOG00000009611	RCL1	98	80.109	ENSIPUG00000018054	RCL1	99	80.109	Ictalurus_punctatus
ENSPCOG00000009611	RCL1	100	97.051	ENSSTOG00000000023	RCL1	100	97.051	Ictidomys_tridecemlineatus
ENSPCOG00000009611	RCL1	100	84.182	ENSJJAG00000015632	-	100	84.182	Jaculus_jaculus
ENSPCOG00000009611	RCL1	89	71.856	ENSJJAG00000000764	-	95	72.165	Jaculus_jaculus
ENSPCOG00000009611	RCL1	100	95.710	ENSJJAG00000022803	-	100	95.710	Jaculus_jaculus
ENSPCOG00000009611	RCL1	98	78.747	ENSKMAG00000011946	rcl1	99	78.747	Kryptolebias_marmoratus
ENSPCOG00000009611	RCL1	97	84.066	ENSLBEG00000003957	rcl1	99	76.757	Labrus_bergylta
ENSPCOG00000009611	RCL1	92	80.994	ENSLACG00000004594	RCL1	99	85.000	Latimeria_chalumnae
ENSPCOG00000009611	RCL1	100	82.574	ENSLOCG00000010148	rcl1	98	82.574	Lepisosteus_oculatus
ENSPCOG00000009611	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSPCOG00000009611	RCL1	100	97.855	ENSMFAG00000037906	RCL1	100	97.855	Macaca_fascicularis
ENSPCOG00000009611	RCL1	100	97.861	ENSMNEG00000012288	RCL1	100	97.861	Macaca_nemestrina
ENSPCOG00000009611	RCL1	100	97.855	ENSMLEG00000043088	RCL1	100	97.855	Mandrillus_leucophaeus
ENSPCOG00000009611	RCL1	97	81.868	ENSMAMG00000008311	rcl1	99	79.730	Mastacembelus_armatus
ENSPCOG00000009611	RCL1	97	82.967	ENSMZEG00005017292	rcl1	99	79.459	Maylandia_zebra
ENSPCOG00000009611	RCL1	96	86.667	ENSMGAG00000002245	RCL1	97	83.962	Meleagris_gallopavo
ENSPCOG00000009611	RCL1	97	95.580	ENSMAUG00000008922	Rcl1	100	96.279	Mesocricetus_auratus
ENSPCOG00000009611	RCL1	100	98.391	ENSMICG00000015562	RCL1	100	98.391	Microcebus_murinus
ENSPCOG00000009611	RCL1	100	96.247	ENSMOCG00000012145	Rcl1	100	96.247	Microtus_ochrogaster
ENSPCOG00000009611	RCL1	99	76.011	ENSMMOG00000021264	rcl1	99	76.011	Mola_mola
ENSPCOG00000009611	RCL1	95	93.239	ENSMODG00000015377	RCL1	94	93.239	Monodelphis_domestica
ENSPCOG00000009611	RCL1	97	80.769	ENSMALG00000018618	rcl1	99	78.649	Monopterus_albus
ENSPCOG00000009611	RCL1	100	96.515	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.515	Mus_caroli
ENSPCOG00000009611	RCL1	100	95.979	ENSMUSG00000024785	Rcl1	100	95.979	Mus_musculus
ENSPCOG00000009611	RCL1	100	95.979	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSPCOG00000009611	RCL1	100	95.710	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSPCOG00000009611	RCL1	100	96.515	ENSMPUG00000004998	RCL1	100	96.515	Mustela_putorius_furo
ENSPCOG00000009611	RCL1	100	95.979	ENSMLUG00000009654	RCL1	100	95.979	Myotis_lucifugus
ENSPCOG00000009611	RCL1	100	96.515	ENSNGAG00000015327	Rcl1	100	96.515	Nannospalax_galili
ENSPCOG00000009611	RCL1	97	82.967	ENSNBRG00000019854	rcl1	96	75.140	Neolamprologus_brichardi
ENSPCOG00000009611	RCL1	100	95.174	ENSNLEG00000008891	RCL1	100	95.174	Nomascus_leucogenys
ENSPCOG00000009611	RCL1	97	93.370	ENSMEUG00000007653	RCL1	100	86.595	Notamacropus_eugenii
ENSPCOG00000009611	RCL1	100	96.247	ENSOPRG00000010965	RCL1	100	96.247	Ochotona_princeps
ENSPCOG00000009611	RCL1	98	95.109	ENSODEG00000004151	RCL1	96	79.878	Octodon_degus
ENSPCOG00000009611	RCL1	97	82.967	ENSONIG00000003871	rcl1	99	79.459	Oreochromis_niloticus
ENSPCOG00000009611	RCL1	96	89.944	ENSOANG00000013193	-	100	88.538	Ornithorhynchus_anatinus
ENSPCOG00000009611	RCL1	100	97.319	ENSOCUG00000008161	RCL1	100	97.319	Oryctolagus_cuniculus
ENSPCOG00000009611	RCL1	100	76.738	ENSORLG00000010443	rcl1	100	76.738	Oryzias_latipes
ENSPCOG00000009611	RCL1	100	76.738	ENSORLG00020012211	rcl1	100	76.738	Oryzias_latipes_hni
ENSPCOG00000009611	RCL1	97	79.670	ENSORLG00015001122	rcl1	100	76.471	Oryzias_latipes_hsok
ENSPCOG00000009611	RCL1	100	78.342	ENSOMEG00000022976	rcl1	88	78.342	Oryzias_melastigma
ENSPCOG00000009611	RCL1	100	97.051	ENSOGAG00000007480	RCL1	100	97.051	Otolemur_garnettii
ENSPCOG00000009611	RCL1	100	95.710	ENSOARG00000013463	RCL1	100	95.710	Ovis_aries
ENSPCOG00000009611	RCL1	100	98.123	ENSPPAG00000037958	RCL1	100	98.123	Pan_paniscus
ENSPCOG00000009611	RCL1	100	94.370	ENSPPRG00000022645	RCL1	100	94.370	Panthera_pardus
ENSPCOG00000009611	RCL1	97	93.923	ENSPTIG00000019031	RCL1	97	94.231	Panthera_tigris_altaica
ENSPCOG00000009611	RCL1	100	98.396	ENSPTRG00000020743	RCL1	100	98.396	Pan_troglodytes
ENSPCOG00000009611	RCL1	100	97.855	ENSPANG00000025151	RCL1	100	97.855	Papio_anubis
ENSPCOG00000009611	RCL1	97	82.967	ENSPKIG00000021022	rcl1	100	78.610	Paramormyrops_kingsleyae
ENSPCOG00000009611	RCL1	97	90.608	ENSPSIG00000012302	RCL1	100	90.549	Pelodiscus_sinensis
ENSPCOG00000009611	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSPCOG00000009611	RCL1	100	96.783	ENSPEMG00000023275	Rcl1	100	96.783	Peromyscus_maniculatus_bairdii
ENSPCOG00000009611	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSPCOG00000009611	RCL1	95	69.663	ENSPMAG00000005419	-	95	69.663	Petromyzon_marinus
ENSPCOG00000009611	RCL1	100	93.566	ENSPCIG00000000188	RCL1	100	93.566	Phascolarctos_cinereus
ENSPCOG00000009611	RCL1	99	79.730	ENSPFOG00000019682	rcl1	99	79.730	Poecilia_formosa
ENSPCOG00000009611	RCL1	99	79.730	ENSPLAG00000022354	rcl1	99	79.730	Poecilia_latipinna
ENSPCOG00000009611	RCL1	99	79.730	ENSPMEG00000008131	rcl1	99	79.730	Poecilia_mexicana
ENSPCOG00000009611	RCL1	99	79.459	ENSPREG00000008032	rcl1	99	79.459	Poecilia_reticulata
ENSPCOG00000009611	RCL1	100	98.123	ENSPPYG00000019244	RCL1	100	98.123	Pongo_abelii
ENSPCOG00000009611	RCL1	100	85.523	ENSPCAG00000001440	RCL1	100	85.523	Procavia_capensis
ENSPCOG00000009611	RCL1	100	96.783	ENSPVAG00000015752	RCL1	100	96.783	Pteropus_vampyrus
ENSPCOG00000009611	RCL1	97	82.967	ENSPNYG00000012910	rcl1	99	79.459	Pundamilia_nyererei
ENSPCOG00000009611	RCL1	97	82.967	ENSPNAG00000028307	rcl1	92	78.820	Pygocentrus_nattereri
ENSPCOG00000009611	RCL1	100	95.710	ENSRNOG00000015491	Rcl1	100	95.710	Rattus_norvegicus
ENSPCOG00000009611	RCL1	100	97.855	ENSRBIG00000035818	RCL1	100	97.855	Rhinopithecus_bieti
ENSPCOG00000009611	RCL1	100	97.861	ENSRROG00000029781	RCL1	100	97.861	Rhinopithecus_roxellana
ENSPCOG00000009611	RCL1	98	36.957	YOL010W	-	97	35.772	Saccharomyces_cerevisiae
ENSPCOG00000009611	RCL1	100	97.861	ENSSBOG00000026369	RCL1	100	97.861	Saimiri_boliviensis_boliviensis
ENSPCOG00000009611	RCL1	96	94.444	ENSSHAG00000014086	RCL1	100	93.333	Sarcophilus_harrisii
ENSPCOG00000009611	RCL1	100	78.877	ENSSFOG00015023020	rcl1	100	78.877	Scleropages_formosus
ENSPCOG00000009611	RCL1	99	78.919	ENSSMAG00000019751	rcl1	85	78.919	Scophthalmus_maximus
ENSPCOG00000009611	RCL1	100	78.610	ENSSDUG00000006349	rcl1	100	78.610	Seriola_dumerili
ENSPCOG00000009611	RCL1	100	78.877	ENSSLDG00000022076	rcl1	100	78.877	Seriola_lalandi_dorsalis
ENSPCOG00000009611	RCL1	100	95.710	ENSSARG00000009260	RCL1	100	95.710	Sorex_araneus
ENSPCOG00000009611	RCL1	100	87.936	ENSSPUG00000016330	RCL1	100	87.936	Sphenodon_punctatus
ENSPCOG00000009611	RCL1	100	80.481	ENSSPAG00000018038	rcl1	100	80.481	Stegastes_partitus
ENSPCOG00000009611	RCL1	100	97.587	ENSSSCG00000005217	RCL1	83	97.587	Sus_scrofa
ENSPCOG00000009611	RCL1	100	84.533	ENSTGUG00000005138	RCL1	100	84.533	Taeniopygia_guttata
ENSPCOG00000009611	RCL1	97	81.319	ENSTRUG00000010493	rcl1	99	78.919	Takifugu_rubripes
ENSPCOG00000009611	RCL1	97	79.670	ENSTNIG00000013214	rcl1	99	77.568	Tetraodon_nigroviridis
ENSPCOG00000009611	RCL1	97	96.685	ENSTBEG00000016339	RCL1	100	90.349	Tupaia_belangeri
ENSPCOG00000009611	RCL1	100	96.247	ENSTTRG00000016525	RCL1	100	96.247	Tursiops_truncatus
ENSPCOG00000009611	RCL1	100	97.051	ENSUAMG00000005598	RCL1	100	97.051	Ursus_americanus
ENSPCOG00000009611	RCL1	97	96.685	ENSUMAG00000017890	RCL1	97	96.636	Ursus_maritimus
ENSPCOG00000009611	RCL1	97	97.790	ENSVPAG00000009188	RCL1	100	98.165	Vicugna_pacos
ENSPCOG00000009611	RCL1	97	96.685	ENSVVUG00000007304	RCL1	89	96.646	Vulpes_vulpes
ENSPCOG00000009611	RCL1	100	75.936	ENSXETG00000000592	rcl1	100	75.936	Xenopus_tropicalis
ENSPCOG00000009611	RCL1	99	79.730	ENSXCOG00000004922	rcl1	99	79.730	Xiphophorus_couchianus
ENSPCOG00000009611	RCL1	57	31.163	ENSXCOG00000008002	rtca	62	31.163	Xiphophorus_couchianus
ENSPCOG00000009611	RCL1	99	79.730	ENSXMAG00000022366	RCL1	99	79.730	Xiphophorus_maculatus