EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000011975 (Gene tree)
Gene ID: 105807741
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 17139 bases
Position: chrKQ019939.1:3048888-3066026
Accession: 105807741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000004045	PRP4	PF08799.11	5.3e-14	1	1
ENSPCOP00000004046	PRP4	PF08799.11	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000013676	PRPF4-202	1632	-	ENSPCOP00000004046	543 (aa)	-	A0A2K6EQP2
ENSPCOT00000013674	PRPF4-201	2519	XM_012641177	ENSPCOP00000004045	521 (aa)	XP_012496631	A0A2K6EQN4

Gene Model

Click here to download ENSPCOG00000011975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000011975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000011975	PRPF4	56	31.852	ENSPCOG00000012625	POC1A	81	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000011975	PRPF4	100	99.040	ENSG00000136875	PRPF4	100	99.040	Homo_sapiens
ENSPCOG00000011975	PRPF4	96	77.197	ENSAPOG00000014132	prpf4	98	77.197	Acanthochromis_polyacanthus
ENSPCOG00000011975	PRPF4	100	99.232	ENSAMEG00000013048	PRPF4	100	98.315	Ailuropoda_melanoleuca
ENSPCOG00000011975	PRPF4	96	76.984	ENSACIG00000005579	prpf4	99	76.984	Amphilophus_citrinellus
ENSPCOG00000011975	PRPF4	96	76.634	ENSAOCG00000005457	prpf4	99	76.634	Amphiprion_ocellaris
ENSPCOG00000011975	PRPF4	96	76.436	ENSAPEG00000000776	prpf4	99	76.436	Amphiprion_percula
ENSPCOG00000011975	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSPCOG00000011975	PRPF4	100	89.060	ENSAPLG00000006534	PRPF4	98	88.762	Anas_platyrhynchos
ENSPCOG00000011975	PRPF4	100	90.440	ENSACAG00000015110	PRPF4	98	91.211	Anolis_carolinensis
ENSPCOG00000011975	PRPF4	100	99.424	ENSANAG00000022464	PRPF4	100	97.606	Aotus_nancymaae
ENSPCOG00000011975	PRPF4	96	76.786	ENSACLG00000019031	prpf4	99	76.786	Astatotilapia_calliptera
ENSPCOG00000011975	PRPF4	97	62.572	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSPCOG00000011975	PRPF4	100	98.464	ENSBTAG00000004571	PRPF4	100	98.464	Bos_taurus
ENSPCOG00000011975	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSPCOG00000011975	PRPF4	100	99.234	ENSCJAG00000017856	PRPF4	100	99.234	Callithrix_jacchus
ENSPCOG00000011975	PRPF4	100	99.232	ENSCAFG00000003224	PRPF4	99	98.689	Canis_familiaris
ENSPCOG00000011975	PRPF4	100	99.232	ENSCAFG00020022637	PRPF4	100	99.232	Canis_lupus_dingo
ENSPCOG00000011975	PRPF4	100	98.659	ENSCHIG00000024648	-	100	98.659	Capra_hircus
ENSPCOG00000011975	PRPF4	100	99.040	ENSTSYG00000010366	PRPF4	100	99.040	Carlito_syrichta
ENSPCOG00000011975	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSPCOG00000011975	PRPF4	100	99.040	ENSCPOG00000010747	-	100	99.040	Cavia_porcellus
ENSPCOG00000011975	PRPF4	100	92.514	ENSCPOG00000014729	-	98	92.745	Cavia_porcellus
ENSPCOG00000011975	PRPF4	100	99.232	ENSCCAG00000028990	PRPF4	100	99.232	Cebus_capucinus
ENSPCOG00000011975	PRPF4	100	99.040	ENSCATG00000021552	PRPF4	100	99.040	Cercocebus_atys
ENSPCOG00000011975	PRPF4	100	99.232	ENSCLAG00000013448	PRPF4	100	99.232	Chinchilla_lanigera
ENSPCOG00000011975	PRPF4	87	96.018	ENSCHOG00000007233	PRPF4	100	96.018	Choloepus_hoffmanni
ENSPCOG00000011975	PRPF4	99	90.874	ENSCPBG00000019136	PRPF4	75	89.714	Chrysemys_picta_bellii
ENSPCOG00000011975	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSPCOG00000011975	PRPF4	96	57.738	ENSCSAVG00000009178	-	100	59.091	Ciona_savignyi
ENSPCOG00000011975	PRPF4	100	99.232	ENSCANG00000003246	PRPF4	100	99.232	Colobus_angolensis_palliatus
ENSPCOG00000011975	PRPF4	100	99.040	ENSCGRG00001016992	Prpf4	100	99.040	Cricetulus_griseus_chok1gshd
ENSPCOG00000011975	PRPF4	100	99.040	ENSCGRG00000017560	Prpf4	100	99.040	Cricetulus_griseus_crigri
ENSPCOG00000011975	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSPCOG00000011975	PRPF4	97	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSPCOG00000011975	PRPF4	100	98.659	ENSDNOG00000013203	PRPF4	100	98.659	Dasypus_novemcinctus
ENSPCOG00000011975	PRPF4	100	99.040	ENSDORG00000026275	Prpf4	100	99.040	Dipodomys_ordii
ENSPCOG00000011975	PRPF4	87	56.236	FBgn0036733	U4-U6-60K	99	50.182	Drosophila_melanogaster
ENSPCOG00000011975	PRPF4	100	96.750	ENSETEG00000020389	PRPF4	100	96.750	Echinops_telfairi
ENSPCOG00000011975	PRPF4	95	72.811	ENSEBUG00000015229	prpf4	86	73.272	Eptatretus_burgeri
ENSPCOG00000011975	PRPF4	100	99.424	ENSEASG00005022678	PRPF4	100	99.424	Equus_asinus_asinus
ENSPCOG00000011975	PRPF4	100	99.424	ENSECAG00000007072	PRPF4	100	99.424	Equus_caballus
ENSPCOG00000011975	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSPCOG00000011975	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSPCOG00000011975	PRPF4	100	99.234	ENSFCAG00000005514	PRPF4	100	99.234	Felis_catus
ENSPCOG00000011975	PRPF4	98	88.341	ENSFALG00000005423	PRPF4	86	88.341	Ficedula_albicollis
ENSPCOG00000011975	PRPF4	100	99.040	ENSFDAG00000005839	PRPF4	100	99.040	Fukomys_damarensis
ENSPCOG00000011975	PRPF4	96	75.992	ENSFHEG00000001300	prpf4	99	75.992	Fundulus_heteroclitus
ENSPCOG00000011975	PRPF4	98	90.196	ENSGALG00000008857	PRPF4	95	90.196	Gallus_gallus
ENSPCOG00000011975	PRPF4	65	70.882	ENSGAFG00000012164	prpf4	66	73.292	Gambusia_affinis
ENSPCOG00000011975	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSPCOG00000011975	PRPF4	99	90.680	ENSGAGG00000025029	PRPF4	97	89.524	Gopherus_agassizii
ENSPCOG00000011975	PRPF4	100	99.040	ENSGGOG00000006943	PRPF4	100	99.040	Gorilla_gorilla
ENSPCOG00000011975	PRPF4	96	76.587	ENSHBUG00000000562	prpf4	99	76.587	Haplochromis_burtoni
ENSPCOG00000011975	PRPF4	100	81.836	ENSHGLG00000016628	-	98	82.617	Heterocephalus_glaber_female
ENSPCOG00000011975	PRPF4	100	99.040	ENSHGLG00000015191	PRPF4	100	99.040	Heterocephalus_glaber_female
ENSPCOG00000011975	PRPF4	100	80.422	ENSHGLG00000003838	-	100	80.422	Heterocephalus_glaber_female
ENSPCOG00000011975	PRPF4	100	80.422	ENSHGLG00100005571	-	100	80.422	Heterocephalus_glaber_male
ENSPCOG00000011975	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSPCOG00000011975	PRPF4	100	99.424	ENSSTOG00000027833	PRPF4	100	99.424	Ictidomys_tridecemlineatus
ENSPCOG00000011975	PRPF4	100	99.040	ENSJJAG00000008838	Prpf4	100	99.040	Jaculus_jaculus
ENSPCOG00000011975	PRPF4	96	76.389	ENSKMAG00000013236	prpf4	99	76.389	Kryptolebias_marmoratus
ENSPCOG00000011975	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSPCOG00000011975	PRPF4	99	80.539	ENSLACG00000016317	PRPF4	98	81.250	Latimeria_chalumnae
ENSPCOG00000011975	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSPCOG00000011975	PRPF4	100	98.467	ENSLAFG00000018225	PRPF4	100	98.467	Loxodonta_africana
ENSPCOG00000011975	PRPF4	100	98.848	ENSMFAG00000039397	PRPF4	100	98.848	Macaca_fascicularis
ENSPCOG00000011975	PRPF4	100	99.040	ENSMMUG00000005844	PRPF4	100	99.040	Macaca_mulatta
ENSPCOG00000011975	PRPF4	100	88.676	ENSMNEG00000033737	PRPF4	100	88.676	Macaca_nemestrina
ENSPCOG00000011975	PRPF4	100	99.040	ENSMLEG00000040284	PRPF4	100	99.040	Mandrillus_leucophaeus
ENSPCOG00000011975	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSPCOG00000011975	PRPF4	96	76.786	ENSMZEG00005023205	prpf4	99	76.786	Maylandia_zebra
ENSPCOG00000011975	PRPF4	99	88.654	ENSMGAG00000001796	PRPF4	99	87.902	Meleagris_gallopavo
ENSPCOG00000011975	PRPF4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSPCOG00000011975	PRPF4	100	99.040	ENSMICG00000015022	PRPF4	100	98.851	Microcebus_murinus
ENSPCOG00000011975	PRPF4	100	98.464	ENSMOCG00000018273	Prpf4	100	98.464	Microtus_ochrogaster
ENSPCOG00000011975	PRPF4	97	75.050	ENSMMOG00000021177	prpf4	99	75.050	Mola_mola
ENSPCOG00000011975	PRPF4	100	94.837	ENSMODG00000004444	-	97	95.285	Monodelphis_domestica
ENSPCOG00000011975	PRPF4	100	94.646	ENSMODG00000025096	-	99	92.251	Monodelphis_domestica
ENSPCOG00000011975	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSPCOG00000011975	PRPF4	100	98.848	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.848	Mus_caroli
ENSPCOG00000011975	PRPF4	100	98.848	ENSMUSG00000066148	Prpf4	100	98.848	Mus_musculus
ENSPCOG00000011975	PRPF4	100	98.656	MGP_PahariEiJ_G0028413	Prpf4	100	98.656	Mus_pahari
ENSPCOG00000011975	PRPF4	100	98.848	MGP_SPRETEiJ_G0027042	Prpf4	100	98.848	Mus_spretus
ENSPCOG00000011975	PRPF4	100	99.232	ENSMPUG00000007883	PRPF4	100	99.232	Mustela_putorius_furo
ENSPCOG00000011975	PRPF4	100	99.232	ENSMLUG00000015309	-	99	99.055	Myotis_lucifugus
ENSPCOG00000011975	PRPF4	100	97.313	ENSMLUG00000008626	-	99	96.786	Myotis_lucifugus
ENSPCOG00000011975	PRPF4	100	93.666	ENSNGAG00000000468	Prpf4	100	93.666	Nannospalax_galili
ENSPCOG00000011975	PRPF4	96	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSPCOG00000011975	PRPF4	100	99.424	ENSNLEG00000016647	PRPF4	100	99.424	Nomascus_leucogenys
ENSPCOG00000011975	PRPF4	99	94.553	ENSMEUG00000013256	PRPF4	99	95.285	Notamacropus_eugenii
ENSPCOG00000011975	PRPF4	100	98.467	ENSOPRG00000005302	PRPF4	100	98.467	Ochotona_princeps
ENSPCOG00000011975	PRPF4	100	99.424	ENSODEG00000018147	PRPF4	100	99.424	Octodon_degus
ENSPCOG00000011975	PRPF4	99	75.096	ENSONIG00000012671	prpf4	99	76.786	Oreochromis_niloticus
ENSPCOG00000011975	PRPF4	100	99.232	ENSOCUG00000005046	PRPF4	100	99.232	Oryctolagus_cuniculus
ENSPCOG00000011975	PRPF4	96	74.701	ENSORLG00000019641	prpf4	99	74.701	Oryzias_latipes
ENSPCOG00000011975	PRPF4	96	74.701	ENSORLG00020019438	prpf4	99	74.701	Oryzias_latipes_hni
ENSPCOG00000011975	PRPF4	96	74.947	ENSOMEG00000020941	prpf4	99	74.947	Oryzias_melastigma
ENSPCOG00000011975	PRPF4	100	95.010	ENSOGAG00000007802	PRPF4	100	94.007	Otolemur_garnettii
ENSPCOG00000011975	PRPF4	100	98.848	ENSOARG00000006319	PRPF4	100	97.238	Ovis_aries
ENSPCOG00000011975	PRPF4	100	99.040	ENSPPAG00000041797	PRPF4	100	99.040	Pan_paniscus
ENSPCOG00000011975	PRPF4	100	99.424	ENSPPRG00000014360	PRPF4	100	99.424	Panthera_pardus
ENSPCOG00000011975	PRPF4	100	99.424	ENSPTIG00000009574	PRPF4	100	99.424	Panthera_tigris_altaica
ENSPCOG00000011975	PRPF4	100	99.040	ENSPTRG00000021274	PRPF4	100	98.851	Pan_troglodytes
ENSPCOG00000011975	PRPF4	100	98.848	ENSPANG00000025776	PRPF4	100	98.343	Papio_anubis
ENSPCOG00000011975	PRPF4	97	81.584	ENSPKIG00000017259	prpf4	99	81.584	Paramormyrops_kingsleyae
ENSPCOG00000011975	PRPF4	100	89.635	ENSPSIG00000010713	PRPF4	90	91.373	Pelodiscus_sinensis
ENSPCOG00000011975	PRPF4	99	58.791	ENSPMGG00000000997	prpf4	98	58.998	Periophthalmus_magnuspinnatus
ENSPCOG00000011975	PRPF4	100	99.040	ENSPEMG00000024115	Prpf4	100	99.040	Peromyscus_maniculatus_bairdii
ENSPCOG00000011975	PRPF4	99	94.553	ENSPCIG00000003821	PRPF4	99	95.285	Phascolarctos_cinereus
ENSPCOG00000011975	PRPF4	96	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSPCOG00000011975	PRPF4	83	71.254	ENSPLAG00000011620	prpf4	96	71.739	Poecilia_latipinna
ENSPCOG00000011975	PRPF4	92	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSPCOG00000011975	PRPF4	98	99.411	ENSPCAG00000002561	PRPF4	99	99.411	Procavia_capensis
ENSPCOG00000011975	PRPF4	100	95.211	ENSPVAG00000004708	PRPF4	98	95.882	Pteropus_vampyrus
ENSPCOG00000011975	PRPF4	96	76.786	ENSPNYG00000008013	prpf4	99	76.786	Pundamilia_nyererei
ENSPCOG00000011975	PRPF4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSPCOG00000011975	PRPF4	100	98.656	ENSRNOG00000014777	Prpf4	100	98.656	Rattus_norvegicus
ENSPCOG00000011975	PRPF4	100	99.232	ENSRBIG00000040221	PRPF4	100	99.232	Rhinopithecus_bieti
ENSPCOG00000011975	PRPF4	100	99.232	ENSRROG00000040240	PRPF4	100	99.232	Rhinopithecus_roxellana
ENSPCOG00000011975	PRPF4	100	95.029	ENSSHAG00000017658	PRPF4	97	95.481	Sarcophilus_harrisii
ENSPCOG00000011975	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSPCOG00000011975	PRPF4	96	75.397	ENSSMAG00000008889	prpf4	99	75.397	Scophthalmus_maximus
ENSPCOG00000011975	PRPF4	96	73.307	ENSSDUG00000022083	prpf4	98	73.506	Seriola_dumerili
ENSPCOG00000011975	PRPF4	96	73.506	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSPCOG00000011975	PRPF4	100	90.979	ENSSPUG00000015582	PRPF4	98	91.569	Sphenodon_punctatus
ENSPCOG00000011975	PRPF4	96	71.006	ENSSPAG00000011286	prpf4	99	71.006	Stegastes_partitus
ENSPCOG00000011975	PRPF4	100	99.424	ENSSSCG00000024648	PRPF4	100	99.424	Sus_scrofa
ENSPCOG00000011975	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSPCOG00000011975	PRPF4	97	75.692	ENSTRUG00000008853	prpf4	99	75.692	Takifugu_rubripes
ENSPCOG00000011975	PRPF4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSPCOG00000011975	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSPCOG00000011975	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSPCOG00000011975	PRPF4	64	96.407	ENSUAMG00000018288	PRPF4	90	96.407	Ursus_americanus
ENSPCOG00000011975	PRPF4	100	98.464	ENSUMAG00000019375	PRPF4	100	98.464	Ursus_maritimus
ENSPCOG00000011975	PRPF4	100	99.042	ENSVPAG00000005281	PRPF4	100	99.042	Vicugna_pacos
ENSPCOG00000011975	PRPF4	100	98.095	ENSVVUG00000002476	PRPF4	100	98.095	Vulpes_vulpes
ENSPCOG00000011975	PRPF4	69	57.778	ENSXCOG00000006101	prpf4	93	59.158	Xiphophorus_couchianus
ENSPCOG00000011975	PRPF4	88	64.192	ENSXMAG00000002750	prpf4	98	65.010	Xiphophorus_maculatus