EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000011996 (Gene tree)
Gene ID: 105806793
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 79849 bases
Position: chrKQ018066.1:2648642-2728490
Accession: 105806793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000004134	EST1	PF10374.9	7.6e-25	1	1
ENSPCOP00000004148	EST1	PF10374.9	7.9e-25	1	1
ENSPCOP00000004141	EST1	PF10374.9	8.3e-25	1	1
ENSPCOP00000004138	EST1	PF10374.9	8.4e-25	1	1
ENSPCOP00000004149	EST1	PF10374.9	2.8e-22	1	1
ENSPCOP00000004134	EST1_DNA_bind	PF10373.9	5.5e-55	1	1
ENSPCOP00000004141	EST1_DNA_bind	PF10373.9	6.2e-55	1	1
ENSPCOP00000004138	EST1_DNA_bind	PF10373.9	6.3e-55	1	1
ENSPCOP00000004148	EST1_DNA_bind	PF10373.9	1.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000013952	SMG7-205	615	-	ENSPCOP00000004149	204 (aa)	-	A0A2K6EQY5
ENSPCOT00000013950	SMG7-204	3513	-	ENSPCOP00000004148	1170 (aa)	-	A0A2K6EQZ9
ENSPCOT00000013955	SMG7-206	219	-	ENSPCOP00000004151	73 (aa)	-	A0A2K6EQZ5
ENSPCOT00000013913	SMG7-201	5754	XM_012640001	ENSPCOP00000004134	1090 (aa)	XP_012495455	A0A2K6EQX3
ENSPCOT00000013925	SMG7-202	3534	-	ENSPCOP00000004138	1177 (aa)	-	A0A2K6EQY7
ENSPCOT00000013928	SMG7-203	3510	XM_012640000	ENSPCOP00000004141	1169 (aa)	XP_012495454	A0A2K6EQY8

Gene Model

Click here to download ENSPCOG00000011996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000011996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000011996	SMG7	100	98.350	ENSG00000116698	SMG7	100	98.667	Homo_sapiens
ENSPCOG00000011996	SMG7	77	93.038	ENSAPOG00000009611	smg7	95	71.558	Acanthochromis_polyacanthus
ENSPCOG00000011996	SMG7	99	93.528	ENSAMEG00000002357	SMG7	100	93.531	Ailuropoda_melanoleuca
ENSPCOG00000011996	SMG7	97	63.271	ENSACIG00000015152	smg7	100	64.107	Amphilophus_citrinellus
ENSPCOG00000011996	SMG7	76	94.194	ENSAOCG00000013538	smg7	99	65.665	Amphiprion_ocellaris
ENSPCOG00000011996	SMG7	76	94.194	ENSAPEG00000007851	smg7	99	65.523	Amphiprion_percula
ENSPCOG00000011996	SMG7	77	94.268	ENSATEG00000006931	smg7	99	65.188	Anabas_testudineus
ENSPCOG00000011996	SMG7	100	85.564	ENSAPLG00000015811	SMG7	100	86.002	Anas_platyrhynchos
ENSPCOG00000011996	SMG7	99	84.680	ENSACAG00000014989	SMG7	99	85.690	Anolis_carolinensis
ENSPCOG00000011996	SMG7	100	96.774	ENSANAG00000028114	SMG7	98	98.889	Aotus_nancymaae
ENSPCOG00000011996	SMG7	76	94.231	ENSACLG00000022079	smg7	99	65.375	Astatotilapia_calliptera
ENSPCOG00000011996	SMG7	76	94.194	ENSAMXG00000020809	smg7	99	67.477	Astyanax_mexicanus
ENSPCOG00000011996	SMG7	100	96.410	ENSBTAG00000008003	SMG7	100	96.410	Bos_taurus
ENSPCOG00000011996	SMG7	99	97.860	ENSCJAG00000005135	SMG7	100	97.856	Callithrix_jacchus
ENSPCOG00000011996	SMG7	100	97.947	ENSCAFG00000013276	SMG7	100	97.947	Canis_familiaris
ENSPCOG00000011996	SMG7	100	97.947	ENSCAFG00020015475	SMG7	100	97.947	Canis_lupus_dingo
ENSPCOG00000011996	SMG7	97	96.381	ENSCHIG00000018192	SMG7	99	96.381	Capra_hircus
ENSPCOG00000011996	SMG7	100	97.778	ENSTSYG00000002667	SMG7	100	97.778	Carlito_syrichta
ENSPCOG00000011996	SMG7	99	97.682	ENSCPOG00000008906	SMG7	100	97.682	Cavia_porcellus
ENSPCOG00000011996	SMG7	100	94.195	ENSCCAG00000028596	SMG7	98	98.889	Cebus_capucinus
ENSPCOG00000011996	SMG7	100	98.291	ENSCATG00000011063	SMG7	100	98.291	Cercocebus_atys
ENSPCOG00000011996	SMG7	100	97.179	ENSCLAG00000010751	SMG7	100	97.215	Chinchilla_lanigera
ENSPCOG00000011996	SMG7	100	98.120	ENSCSAG00000012654	SMG7	100	98.120	Chlorocebus_sabaeus
ENSPCOG00000011996	SMG7	95	87.735	ENSCHOG00000010522	SMG7	99	88.720	Choloepus_hoffmanni
ENSPCOG00000011996	SMG7	100	87.895	ENSCPBG00000015724	SMG7	100	88.333	Chrysemys_picta_bellii
ENSPCOG00000011996	SMG7	77	51.829	ENSCING00000006953	-	95	53.571	Ciona_intestinalis
ENSPCOG00000011996	SMG7	99	94.238	ENSCANG00000015680	SMG7	98	98.333	Colobus_angolensis_palliatus
ENSPCOG00000011996	SMG7	99	96.055	ENSCGRG00001013705	Smg7	100	96.055	Cricetulus_griseus_chok1gshd
ENSPCOG00000011996	SMG7	98	96.084	ENSCGRG00000018401	Smg7	100	96.084	Cricetulus_griseus_crigri
ENSPCOG00000011996	SMG7	77	89.809	ENSCSEG00000007392	-	91	88.199	Cynoglossus_semilaevis
ENSPCOG00000011996	SMG7	95	70.500	ENSCVAG00000011842	smg7	100	70.000	Cyprinodon_variegatus
ENSPCOG00000011996	SMG7	76	94.839	ENSDARG00000060767	smg7	99	66.638	Danio_rerio
ENSPCOG00000011996	SMG7	98	96.693	ENSDORG00000007331	Smg7	100	96.693	Dipodomys_ordii
ENSPCOG00000011996	SMG7	94	96.377	ENSETEG00000002654	SMG7	100	96.377	Echinops_telfairi
ENSPCOG00000011996	SMG7	100	97.863	ENSEASG00005006524	SMG7	100	97.863	Equus_asinus_asinus
ENSPCOG00000011996	SMG7	100	97.949	ENSECAG00000004313	SMG7	100	97.949	Equus_caballus
ENSPCOG00000011996	SMG7	100	93.639	ENSEEUG00000002024	SMG7	100	94.232	Erinaceus_europaeus
ENSPCOG00000011996	SMG7	77	94.268	ENSELUG00000010293	smg7	99	66.576	Esox_lucius
ENSPCOG00000011996	SMG7	99	97.860	ENSFCAG00000010900	SMG7	100	97.860	Felis_catus
ENSPCOG00000011996	SMG7	98	82.823	ENSFALG00000003047	SMG7	100	83.673	Ficedula_albicollis
ENSPCOG00000011996	SMG7	97	97.347	ENSFDAG00000012121	SMG7	99	97.237	Fukomys_damarensis
ENSPCOG00000011996	SMG7	77	89.809	ENSFHEG00000011073	smg7	99	63.140	Fundulus_heteroclitus
ENSPCOG00000011996	SMG7	77	90.446	ENSGMOG00000004916	smg7	92	67.883	Gadus_morhua
ENSPCOG00000011996	SMG7	100	86.014	ENSGALG00000004667	SMG7	100	86.451	Gallus_gallus
ENSPCOG00000011996	SMG7	87	83.978	ENSGAFG00000019000	smg7	99	63.258	Gambusia_affinis
ENSPCOG00000011996	SMG7	76	92.903	ENSGACG00000001634	smg7	99	65.267	Gasterosteus_aculeatus
ENSPCOG00000011996	SMG7	77	96.250	ENSGAGG00000024208	-	88	93.373	Gopherus_agassizii
ENSPCOG00000011996	SMG7	100	98.120	ENSGGOG00000002342	SMG7	100	98.120	Gorilla_gorilla
ENSPCOG00000011996	SMG7	76	94.231	ENSHBUG00000003726	smg7	97	73.096	Haplochromis_burtoni
ENSPCOG00000011996	SMG7	100	93.492	ENSHGLG00000009353	SMG7	100	97.326	Heterocephalus_glaber_female
ENSPCOG00000011996	SMG7	97	89.144	ENSHGLG00100004878	-	99	89.144	Heterocephalus_glaber_male
ENSPCOG00000011996	SMG7	100	93.580	ENSHGLG00100009637	-	100	95.633	Heterocephalus_glaber_male
ENSPCOG00000011996	SMG7	77	84.906	ENSHCOG00000012804	-	86	85.625	Hippocampus_comes
ENSPCOG00000011996	SMG7	76	94.194	ENSIPUG00000016997	smg7	99	67.761	Ictalurus_punctatus
ENSPCOG00000011996	SMG7	100	98.167	ENSSTOG00000000401	SMG7	100	98.172	Ictidomys_tridecemlineatus
ENSPCOG00000011996	SMG7	97	95.852	ENSJJAG00000012351	Smg7	99	95.852	Jaculus_jaculus
ENSPCOG00000011996	SMG7	85	86.207	ENSJJAG00000000309	-	98	86.207	Jaculus_jaculus
ENSPCOG00000011996	SMG7	65	93.182	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSPCOG00000011996	SMG7	50	64.098	ENSLBEG00000005220	-	75	64.098	Labrus_bergylta
ENSPCOG00000011996	SMG7	78	91.195	ENSLBEG00000002983	smg7	99	65.338	Labrus_bergylta
ENSPCOG00000011996	SMG7	97	75.673	ENSLACG00000000972	SMG7	99	76.021	Latimeria_chalumnae
ENSPCOG00000011996	SMG7	78	94.340	ENSLOCG00000002010	smg7	99	67.777	Lepisosteus_oculatus
ENSPCOG00000011996	SMG7	98	97.737	ENSLAFG00000008186	SMG7	100	97.737	Loxodonta_africana
ENSPCOG00000011996	SMG7	100	98.205	ENSMFAG00000031653	SMG7	100	98.205	Macaca_fascicularis
ENSPCOG00000011996	SMG7	100	98.291	ENSMMUG00000018458	SMG7	100	98.291	Macaca_mulatta
ENSPCOG00000011996	SMG7	100	94.371	ENSMNEG00000034798	SMG7	98	98.889	Macaca_nemestrina
ENSPCOG00000011996	SMG7	100	98.291	ENSMLEG00000037170	SMG7	100	98.291	Mandrillus_leucophaeus
ENSPCOG00000011996	SMG7	77	92.357	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSPCOG00000011996	SMG7	76	94.231	ENSMZEG00005015247	smg7	99	65.289	Maylandia_zebra
ENSPCOG00000011996	SMG7	97	85.714	ENSMGAG00000001561	SMG7	98	86.164	Meleagris_gallopavo
ENSPCOG00000011996	SMG7	98	96.519	ENSMAUG00000019484	Smg7	100	96.519	Mesocricetus_auratus
ENSPCOG00000011996	SMG7	98	99.652	ENSMICG00000007145	SMG7	100	99.652	Microcebus_murinus
ENSPCOG00000011996	SMG7	98	96.345	ENSMOCG00000020748	Smg7	100	96.345	Microtus_ochrogaster
ENSPCOG00000011996	SMG7	79	89.441	ENSMMOG00000001524	smg7	99	63.400	Mola_mola
ENSPCOG00000011996	SMG7	92	88.899	ENSMODG00000007139	SMG7	99	89.564	Monodelphis_domestica
ENSPCOG00000011996	SMG7	77	92.994	ENSMALG00000000061	smg7	94	69.154	Monopterus_albus
ENSPCOG00000011996	SMG7	98	96.084	MGP_CAROLIEiJ_G0014704	Smg7	100	96.084	Mus_caroli
ENSPCOG00000011996	SMG7	98	95.997	ENSMUSG00000042772	Smg7	100	95.997	Mus_musculus
ENSPCOG00000011996	SMG7	98	95.997	MGP_PahariEiJ_G0027940	Smg7	100	95.997	Mus_pahari
ENSPCOG00000011996	SMG7	98	96.084	MGP_SPRETEiJ_G0015511	Smg7	100	96.084	Mus_spretus
ENSPCOG00000011996	SMG7	96	97.681	ENSMPUG00000011732	SMG7	97	97.681	Mustela_putorius_furo
ENSPCOG00000011996	SMG7	97	96.734	ENSMLUG00000015417	SMG7	99	96.734	Myotis_lucifugus
ENSPCOG00000011996	SMG7	98	96.603	ENSNGAG00000009836	Smg7	100	96.603	Nannospalax_galili
ENSPCOG00000011996	SMG7	98	60.315	ENSNBRG00000024343	smg7	98	70.952	Neolamprologus_brichardi
ENSPCOG00000011996	SMG7	100	98.462	ENSNLEG00000018018	SMG7	100	98.462	Nomascus_leucogenys
ENSPCOG00000011996	SMG7	75	85.714	ENSMEUG00000004681	SMG7	82	86.890	Notamacropus_eugenii
ENSPCOG00000011996	SMG7	99	81.421	ENSOPRG00000013942	SMG7	96	85.192	Ochotona_princeps
ENSPCOG00000011996	SMG7	98	97.128	ENSODEG00000010390	SMG7	100	97.128	Octodon_degus
ENSPCOG00000011996	SMG7	76	94.194	ENSONIG00000000277	smg7	99	64.979	Oreochromis_niloticus
ENSPCOG00000011996	SMG7	96	91.489	ENSOANG00000000994	SMG7	100	91.578	Ornithorhynchus_anatinus
ENSPCOG00000011996	SMG7	100	89.915	ENSOCUG00000005887	SMG7	95	90.171	Oryctolagus_cuniculus
ENSPCOG00000011996	SMG7	87	83.051	ENSORLG00000007314	smg7	81	83.051	Oryzias_latipes
ENSPCOG00000011996	SMG7	77	91.083	ENSORLG00020015779	smg7	84	80.749	Oryzias_latipes_hni
ENSPCOG00000011996	SMG7	83	85.294	ENSORLG00015012289	smg7	99	62.934	Oryzias_latipes_hsok
ENSPCOG00000011996	SMG7	77	91.083	ENSOMEG00000002328	smg7	99	63.101	Oryzias_melastigma
ENSPCOG00000011996	SMG7	99	97.024	ENSOGAG00000003107	SMG7	100	97.024	Otolemur_garnettii
ENSPCOG00000011996	SMG7	100	95.641	ENSOARG00000001352	SMG7	100	96.239	Ovis_aries
ENSPCOG00000011996	SMG7	100	94.547	ENSPPAG00000031619	SMG7	98	98.889	Pan_paniscus
ENSPCOG00000011996	SMG7	99	98.031	ENSPPRG00000011222	SMG7	100	98.031	Panthera_pardus
ENSPCOG00000011996	SMG7	99	96.068	ENSPTIG00000007242	SMG7	99	96.068	Panthera_tigris_altaica
ENSPCOG00000011996	SMG7	100	97.623	ENSPTRG00000001764	SMG7	100	97.623	Pan_troglodytes
ENSPCOG00000011996	SMG7	100	98.291	ENSPANG00000004520	SMG7	100	98.291	Papio_anubis
ENSPCOG00000011996	SMG7	79	89.441	ENSPKIG00000007242	smg7	99	69.000	Paramormyrops_kingsleyae
ENSPCOG00000011996	SMG7	97	91.293	ENSPSIG00000012201	SMG7	99	91.645	Pelodiscus_sinensis
ENSPCOG00000011996	SMG7	77	86.076	ENSPMGG00000002179	-	93	81.065	Periophthalmus_magnuspinnatus
ENSPCOG00000011996	SMG7	55	57.000	ENSPMGG00000021833	smg7	79	70.796	Periophthalmus_magnuspinnatus
ENSPCOG00000011996	SMG7	98	95.387	ENSPEMG00000011315	Smg7	100	95.387	Peromyscus_maniculatus_bairdii
ENSPCOG00000011996	SMG7	100	89.543	ENSPCIG00000003786	SMG7	99	91.919	Phascolarctos_cinereus
ENSPCOG00000011996	SMG7	76	91.613	ENSPFOG00000019219	smg7	99	62.862	Poecilia_formosa
ENSPCOG00000011996	SMG7	76	91.613	ENSPLAG00000001446	smg7	99	63.203	Poecilia_latipinna
ENSPCOG00000011996	SMG7	77	90.446	ENSPMEG00000005218	smg7	99	62.433	Poecilia_mexicana
ENSPCOG00000011996	SMG7	77	89.809	ENSPREG00000019039	smg7	92	60.491	Poecilia_reticulata
ENSPCOG00000011996	SMG7	100	94.635	ENSPPYG00000000427	SMG7	100	94.635	Pongo_abelii
ENSPCOG00000011996	SMG7	98	84.111	ENSPCAG00000008360	SMG7	100	84.111	Procavia_capensis
ENSPCOG00000011996	SMG7	99	86.139	ENSPVAG00000000851	SMG7	100	86.139	Pteropus_vampyrus
ENSPCOG00000011996	SMG7	76	94.231	ENSPNYG00000007643	smg7	99	65.142	Pundamilia_nyererei
ENSPCOG00000011996	SMG7	80	92.121	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSPCOG00000011996	SMG7	99	95.287	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSPCOG00000011996	SMG7	100	98.205	ENSRBIG00000036316	SMG7	100	98.205	Rhinopithecus_bieti
ENSPCOG00000011996	SMG7	100	98.205	ENSRROG00000035719	SMG7	100	98.205	Rhinopithecus_roxellana
ENSPCOG00000011996	SMG7	100	97.984	ENSSBOG00000023454	SMG7	100	97.984	Saimiri_boliviensis_boliviensis
ENSPCOG00000011996	SMG7	100	88.938	ENSSHAG00000013147	SMG7	100	89.289	Sarcophilus_harrisii
ENSPCOG00000011996	SMG7	76	92.903	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSPCOG00000011996	SMG7	76	94.194	ENSSMAG00000006067	smg7	99	65.195	Scophthalmus_maximus
ENSPCOG00000011996	SMG7	76	94.231	ENSSDUG00000017543	smg7	99	64.856	Seriola_dumerili
ENSPCOG00000011996	SMG7	77	93.038	ENSSLDG00000003750	-	94	94.904	Seriola_lalandi_dorsalis
ENSPCOG00000011996	SMG7	99	86.484	ENSSPUG00000002064	SMG7	99	86.926	Sphenodon_punctatus
ENSPCOG00000011996	SMG7	100	64.996	ENSSPAG00000008733	smg7	100	65.082	Stegastes_partitus
ENSPCOG00000011996	SMG7	100	97.800	ENSSSCG00000015558	SMG7	100	97.800	Sus_scrofa
ENSPCOG00000011996	SMG7	99	85.903	ENSTGUG00000003928	SMG7	100	86.432	Taeniopygia_guttata
ENSPCOG00000011996	SMG7	85	82.759	ENSTRUG00000003612	-	95	82.759	Takifugu_rubripes
ENSPCOG00000011996	SMG7	76	89.103	ENSTNIG00000002802	smg7	99	63.667	Tetraodon_nigroviridis
ENSPCOG00000011996	SMG7	77	96.610	ENSTBEG00000003220	SMG7	81	93.562	Tupaia_belangeri
ENSPCOG00000011996	SMG7	99	96.413	ENSTTRG00000014778	SMG7	100	96.413	Tursiops_truncatus
ENSPCOG00000011996	SMG7	96	97.805	ENSUAMG00000017473	SMG7	100	97.805	Ursus_americanus
ENSPCOG00000011996	SMG7	96	97.805	ENSUMAG00000016389	SMG7	100	97.805	Ursus_maritimus
ENSPCOG00000011996	SMG7	100	98.033	ENSVVUG00000008976	SMG7	100	98.033	Vulpes_vulpes
ENSPCOG00000011996	SMG7	100	69.792	ENSXETG00000012528	smg7	100	70.052	Xenopus_tropicalis
ENSPCOG00000011996	SMG7	76	92.258	ENSXMAG00000007123	smg7	99	63.503	Xiphophorus_maculatus