EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000012189 (Gene tree)
Gene ID: 105821905
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 4254 bases
Position: chrKQ025846.1:3620245-3624498
Accession: 105821905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000004106	MMR_HSR1	PF01926.23	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000013862	-	372	-	ENSPCOP00000004112	123 (aa)	-	A0A2K6EQV7
ENSPCOT00000013852	-	1143	XM_012658748	ENSPCOP00000004106	202 (aa)	XP_012514202	A0A2K6EQV1

Gene Model

Click here to download ENSPCOG00000012189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000012189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000012189	-	84	55.294	ENSPCOG00000026153	RAB35	84	55.294
ENSPCOG00000012189	-	62	31.429	ENSPCOG00000024163	ARFRP1	67	31.429
ENSPCOG00000012189	-	81	32.121	ENSPCOG00000015977	RHEB	87	32.121
ENSPCOG00000012189	-	81	38.788	ENSPCOG00000028471	RAB23	69	38.788
ENSPCOG00000012189	-	90	55.249	ENSPCOG00000017244	RAB1A	88	55.249
ENSPCOG00000012189	-	84	54.118	ENSPCOG00000009241	RAB15	80	54.118
ENSPCOG00000012189	-	80	49.383	ENSPCOG00000017316	RAB30	80	49.383
ENSPCOG00000012189	-	81	41.071	ENSPCOG00000002853	RAB9B	83	41.071
ENSPCOG00000012189	-	92	42.857	ENSPCOG00000016536	-	87	42.857
ENSPCOG00000012189	-	85	38.596	ENSPCOG00000019205	RAB22A	88	38.596
ENSPCOG00000012189	-	80	38.272	ENSPCOG00000013517	NRAS	85	38.272
ENSPCOG00000012189	-	84	41.379	ENSPCOG00000014314	RAB33B	76	41.379
ENSPCOG00000012189	-	91	54.348	ENSPCOG00000025845	RAB1B	92	54.348
ENSPCOG00000012189	-	95	38.835	ENSPCOG00000021648	RAB34	80	38.835
ENSPCOG00000012189	-	62	30.952	ENSPCOG00000024271	ARL3	66	30.952
ENSPCOG00000012189	-	86	46.629	ENSPCOG00000013225	RAB39B	84	46.629
ENSPCOG00000012189	-	80	39.130	ENSPCOG00000022692	RAB31	83	39.130
ENSPCOG00000012189	-	85	51.744	ENSPCOG00000019816	RAB12	70	51.744
ENSPCOG00000012189	-	78	41.772	ENSPCOG00000018146	RAB6B	76	41.772
ENSPCOG00000012189	-	86	42.775	ENSPCOG00000005144	RAB25	81	42.775
ENSPCOG00000012189	-	97	41.627	ENSPCOG00000015802	-	95	41.627
ENSPCOG00000012189	-	80	42.236	ENSPCOG00000026327	RAB5C	75	42.236
ENSPCOG00000012189	-	95	36.979	ENSPCOG00000016461	RAB5B	89	36.979
ENSPCOG00000012189	-	84	30.682	ENSPCOG00000025665	DNAJC27	90	31.447
ENSPCOG00000012189	-	80	38.889	ENSPCOG00000021838	HRAS	85	38.889
ENSPCOG00000012189	-	84	47.929	ENSPCOG00000020717	RAB2A	80	47.929
ENSPCOG00000012189	-	85	43.169	ENSPCOG00000028877	RAB33A	77	43.169
ENSPCOG00000012189	-	80	37.423	ENSPCOG00000023517	MRAS	78	37.423
ENSPCOG00000012189	-	79	40.123	ENSPCOG00000027432	RAB36	52	40.123
ENSPCOG00000012189	-	67	30.882	ENSPCOG00000027640	ARF5	72	30.882
ENSPCOG00000012189	-	78	43.038	ENSPCOG00000021991	RAB6A	76	43.038
ENSPCOG00000012189	-	80	41.765	ENSPCOG00000008605	-	77	41.765
ENSPCOG00000012189	-	94	41.667	ENSPCOG00000028053	RAB11B	88	47.826
ENSPCOG00000012189	-	80	44.099	ENSPCOG00000013289	RAB5A	75	44.099
ENSPCOG00000012189	-	67	47.794	ENSPCOG00000008655	-	93	47.794
ENSPCOG00000012189	-	86	44.000	ENSPCOG00000018906	RAB18	84	44.000
ENSPCOG00000012189	-	82	44.242	ENSPCOG00000017682	RAB14	77	44.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000012189	-	100	98.030	ENSG00000143545	RAB13	100	98.030	Homo_sapiens
ENSPCOG00000012189	-	95	79.167	ENSACIG00000008584	rab13	92	79.167	Amphilophus_citrinellus
ENSPCOG00000012189	-	100	97.537	ENSANAG00000030247	-	100	97.537	Aotus_nancymaae
ENSPCOG00000012189	-	99	80.100	ENSAMXG00000030712	rab13	99	80.100	Astyanax_mexicanus
ENSPCOG00000012189	-	100	96.059	ENSBTAG00000017604	RAB13	100	96.059	Bos_taurus
ENSPCOG00000012189	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSPCOG00000012189	-	100	96.552	ENSCJAG00000009933	-	100	96.552	Callithrix_jacchus
ENSPCOG00000012189	-	100	95.567	ENSCHIG00000022271	-	100	95.567	Capra_hircus
ENSPCOG00000012189	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSPCOG00000012189	-	100	97.537	ENSCCAG00000028502	-	100	97.537	Cebus_capucinus
ENSPCOG00000012189	-	100	98.030	ENSCATG00000041779	-	100	98.030	Cercocebus_atys
ENSPCOG00000012189	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSPCOG00000012189	-	100	98.030	ENSCANG00000036573	-	100	98.030	Colobus_angolensis_palliatus
ENSPCOG00000012189	-	100	93.596	ENSCGRG00001021505	Rab13	100	93.596	Cricetulus_griseus_chok1gshd
ENSPCOG00000012189	-	100	93.596	ENSCGRG00000012126	Rab13	100	93.596	Cricetulus_griseus_crigri
ENSPCOG00000012189	-	99	77.451	ENSCSEG00000002358	rab13	99	77.451	Cynoglossus_semilaevis
ENSPCOG00000012189	-	99	79.104	ENSDARG00000034771	rab13	99	79.104	Danio_rerio
ENSPCOG00000012189	-	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSPCOG00000012189	-	100	97.537	ENSEASG00005000683	-	100	97.537	Equus_asinus_asinus
ENSPCOG00000012189	-	100	97.537	ENSECAG00000016551	RAB13	100	97.537	Equus_caballus
ENSPCOG00000012189	-	99	90.594	ENSEEUG00000001233	-	99	90.594	Erinaceus_europaeus
ENSPCOG00000012189	-	99	77.612	ENSELUG00000012801	rab13	99	77.612	Esox_lucius
ENSPCOG00000012189	-	100	91.133	ENSFCAG00000045269	-	100	91.133	Felis_catus
ENSPCOG00000012189	-	65	97.727	ENSFDAG00000014469	-	100	97.727	Fukomys_damarensis
ENSPCOG00000012189	-	99	76.617	ENSFHEG00000021221	rab13	95	86.127	Fundulus_heteroclitus
ENSPCOG00000012189	-	99	76.617	ENSGACG00000011925	rab13	99	76.617	Gasterosteus_aculeatus
ENSPCOG00000012189	-	91	86.957	ENSGAGG00000000742	-	99	81.773	Gopherus_agassizii
ENSPCOG00000012189	-	100	98.030	ENSGGOG00000023693	RAB13	100	98.030	Gorilla_gorilla
ENSPCOG00000012189	-	100	91.089	ENSHGLG00000008749	RAB13	100	91.089	Heterocephalus_glaber_female
ENSPCOG00000012189	-	100	91.089	ENSHGLG00100013608	RAB13	100	91.089	Heterocephalus_glaber_male
ENSPCOG00000012189	-	99	74.627	ENSHCOG00000007440	rab13	97	85.227	Hippocampus_comes
ENSPCOG00000012189	-	99	77.889	ENSIPUG00000003199	rab13	99	77.889	Ictalurus_punctatus
ENSPCOG00000012189	-	100	96.552	ENSSTOG00000011222	-	100	96.552	Ictidomys_tridecemlineatus
ENSPCOG00000012189	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSPCOG00000012189	-	99	76.884	ENSKMAG00000001908	rab13	99	76.884	Kryptolebias_marmoratus
ENSPCOG00000012189	-	99	77.889	ENSLBEG00000026779	rab13	99	77.889	Labrus_bergylta
ENSPCOG00000012189	-	85	78.488	ENSLACG00000008103	-	97	78.488	Latimeria_chalumnae
ENSPCOG00000012189	-	100	98.030	ENSMFAG00000041018	RAB13	100	98.030	Macaca_fascicularis
ENSPCOG00000012189	-	100	98.030	ENSMNEG00000028951	-	100	98.030	Macaca_nemestrina
ENSPCOG00000012189	-	100	98.030	ENSMLEG00000042247	-	100	98.030	Mandrillus_leucophaeus
ENSPCOG00000012189	-	99	76.617	ENSMAMG00000014602	rab13	99	76.617	Mastacembelus_armatus
ENSPCOG00000012189	-	100	92.611	ENSMAUG00000015713	Rab13	100	92.611	Mesocricetus_auratus
ENSPCOG00000012189	-	100	98.515	ENSMICG00000010340	-	100	98.515	Microcebus_murinus
ENSPCOG00000012189	-	100	94.581	ENSMOCG00000021448	Rab13	100	94.581	Microtus_ochrogaster
ENSPCOG00000012189	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSPCOG00000012189	-	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	100	91.626	Mus_caroli
ENSPCOG00000012189	-	100	91.089	ENSMUSG00000027935	Rab13	100	91.089	Mus_musculus
ENSPCOG00000012189	-	99	91.542	MGP_PahariEiJ_G0026671	Rab13	99	91.542	Mus_pahari
ENSPCOG00000012189	-	100	94.554	ENSNGAG00000010309	Rab13	100	94.554	Nannospalax_galili
ENSPCOG00000012189	-	99	77.114	ENSNBRG00000004124	rab13	99	77.114	Neolamprologus_brichardi
ENSPCOG00000012189	-	100	98.030	ENSNLEG00000028944	-	100	98.030	Nomascus_leucogenys
ENSPCOG00000012189	-	100	93.137	ENSMEUG00000009667	-	100	93.137	Notamacropus_eugenii
ENSPCOG00000012189	-	63	98.425	ENSODEG00000012634	-	100	98.425	Octodon_degus
ENSPCOG00000012189	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSPCOG00000012189	-	99	76.617	ENSONIG00000006340	rab13	99	76.617	Oreochromis_niloticus
ENSPCOG00000012189	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSPCOG00000012189	-	99	77.612	ENSOMEG00000008210	rab13	99	77.612	Oryzias_melastigma
ENSPCOG00000012189	-	99	94.030	ENSOGAG00000016969	-	99	94.030	Otolemur_garnettii
ENSPCOG00000012189	-	100	98.030	ENSPPAG00000028435	-	100	98.030	Pan_paniscus
ENSPCOG00000012189	-	100	91.133	ENSPPRG00000008865	-	100	91.133	Panthera_pardus
ENSPCOG00000012189	-	100	98.030	ENSPTRG00000001370	RAB13	100	98.030	Pan_troglodytes
ENSPCOG00000012189	-	100	98.030	ENSPANG00000004479	-	100	98.030	Papio_anubis
ENSPCOG00000012189	-	99	76.961	ENSPMGG00000007680	rab13	99	76.961	Periophthalmus_magnuspinnatus
ENSPCOG00000012189	-	53	98.148	ENSPEMG00000017353	-	81	98.148	Peromyscus_maniculatus_bairdii
ENSPCOG00000012189	-	100	93.137	ENSPCIG00000029350	-	100	93.137	Phascolarctos_cinereus
ENSPCOG00000012189	-	86	84.393	ENSPLAG00000005832	RAB13	93	84.393	Poecilia_latipinna
ENSPCOG00000012189	-	90	81.215	ENSPREG00000017567	rab13	99	75.124	Poecilia_reticulata
ENSPCOG00000012189	-	100	98.030	ENSPPYG00000000790	-	100	98.030	Pongo_abelii
ENSPCOG00000012189	-	100	94.059	ENSPVAG00000011095	-	100	94.059	Pteropus_vampyrus
ENSPCOG00000012189	-	87	85.227	ENSPNAG00000004189	rab13	93	85.227	Pygocentrus_nattereri
ENSPCOG00000012189	-	100	91.626	ENSRNOG00000016733	Rab13	100	91.626	Rattus_norvegicus
ENSPCOG00000012189	-	100	97.537	ENSRBIG00000008552	-	100	97.537	Rhinopithecus_bieti
ENSPCOG00000012189	-	100	97.537	ENSRROG00000036885	-	100	97.537	Rhinopithecus_roxellana
ENSPCOG00000012189	-	100	98.020	ENSSBOG00000020342	-	100	98.020	Saimiri_boliviensis_boliviensis
ENSPCOG00000012189	-	100	92.647	ENSSHAG00000011866	-	100	92.647	Sarcophilus_harrisii
ENSPCOG00000012189	-	100	96.552	ENSSSCG00000006564	-	100	96.552	Sus_scrofa
ENSPCOG00000012189	-	99	78.109	ENSTRUG00000024177	rab13	99	78.109	Takifugu_rubripes
ENSPCOG00000012189	-	100	96.552	ENSTBEG00000012734	-	100	96.552	Tupaia_belangeri
ENSPCOG00000012189	-	100	97.537	ENSTTRG00000011183	-	100	97.537	Tursiops_truncatus
ENSPCOG00000012189	-	71	81.944	ENSXETG00000020729	rab13	99	78.261	Xenopus_tropicalis
ENSPCOG00000012189	-	86	83.237	ENSXCOG00000019533	rab13	93	83.237	Xiphophorus_couchianus