EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000012360 (Gene tree)
Gene ID: 105808571
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 34228 bases
Position: chrKQ012995.1:9682524-9716751
Accession: 105808571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000004190	MMR_HSR1	PF01926.23	3.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000014052	LSG1-201	1962	XM_012642248	ENSPCOP00000004190	653 (aa)	XP_012497702	A0A2K6ER36

Gene Model

Click here to download ENSPCOG00000012360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000012360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000012360	LSG1	100	87.405	ENSG00000041802	LSG1	98	89.655	Homo_sapiens
ENSPCOG00000012360	LSG1	99	63.994	ENSAPOG00000009694	lsg1	99	64.297	Acanthochromis_polyacanthus
ENSPCOG00000012360	LSG1	99	82.701	ENSAMEG00000009343	LSG1	99	82.701	Ailuropoda_melanoleuca
ENSPCOG00000012360	LSG1	98	64.561	ENSACIG00000012406	lsg1	99	65.356	Amphilophus_citrinellus
ENSPCOG00000012360	LSG1	99	62.935	ENSAOCG00000016066	lsg1	99	63.389	Amphiprion_ocellaris
ENSPCOG00000012360	LSG1	99	63.238	ENSAPEG00000003252	lsg1	99	63.238	Amphiprion_percula
ENSPCOG00000012360	LSG1	98	63.932	ENSATEG00000011794	lsg1	99	63.994	Anabas_testudineus
ENSPCOG00000012360	LSG1	95	64.082	ENSACAG00000004222	LSG1	99	63.391	Anolis_carolinensis
ENSPCOG00000012360	LSG1	100	88.771	ENSANAG00000021153	LSG1	100	88.771	Aotus_nancymaae
ENSPCOG00000012360	LSG1	99	63.158	ENSACLG00000000520	lsg1	99	63.333	Astatotilapia_calliptera
ENSPCOG00000012360	LSG1	99	62.349	ENSAMXG00000008271	lsg1	99	62.349	Astyanax_mexicanus
ENSPCOG00000012360	LSG1	100	84.067	ENSBTAG00000008461	LSG1	100	83.915	Bos_taurus
ENSPCOG00000012360	LSG1	66	50.000	WBGene00016907	C53H9.2	90	55.814	Caenorhabditis_elegans
ENSPCOG00000012360	LSG1	100	88.164	ENSCJAG00000013962	LSG1	100	88.164	Callithrix_jacchus
ENSPCOG00000012360	LSG1	95	84.160	ENSCAFG00000013445	LSG1	99	84.160	Canis_familiaris
ENSPCOG00000012360	LSG1	99	82.753	ENSCAFG00020002216	LSG1	99	83.788	Canis_lupus_dingo
ENSPCOG00000012360	LSG1	99	83.283	ENSCHIG00000015769	LSG1	99	83.283	Capra_hircus
ENSPCOG00000012360	LSG1	100	87.557	ENSTSYG00000001447	LSG1	100	87.557	Carlito_syrichta
ENSPCOG00000012360	LSG1	95	76.341	ENSCAPG00000009856	LSG1	100	76.387	Cavia_aperea
ENSPCOG00000012360	LSG1	100	88.668	ENSCCAG00000035744	LSG1	100	88.668	Cebus_capucinus
ENSPCOG00000012360	LSG1	100	88.164	ENSCATG00000042060	LSG1	100	86.646	Cercocebus_atys
ENSPCOG00000012360	LSG1	100	88.923	ENSCSAG00000008796	LSG1	92	88.923	Chlorocebus_sabaeus
ENSPCOG00000012360	LSG1	99	68.636	ENSCPBG00000015941	LSG1	83	68.636	Chrysemys_picta_bellii
ENSPCOG00000012360	LSG1	71	61.053	ENSCING00000007079	-	99	61.053	Ciona_intestinalis
ENSPCOG00000012360	LSG1	76	54.800	ENSCSAVG00000002514	-	97	54.800	Ciona_savignyi
ENSPCOG00000012360	LSG1	100	88.164	ENSCANG00000030709	LSG1	100	88.164	Colobus_angolensis_palliatus
ENSPCOG00000012360	LSG1	100	82.569	ENSCGRG00001019846	Lsg1	100	82.879	Cricetulus_griseus_chok1gshd
ENSPCOG00000012360	LSG1	100	82.424	ENSCGRG00000014617	Lsg1	100	82.879	Cricetulus_griseus_crigri
ENSPCOG00000012360	LSG1	98	62.615	ENSCSEG00000008522	lsg1	99	61.991	Cynoglossus_semilaevis
ENSPCOG00000012360	LSG1	97	64.075	ENSCVAG00000002484	lsg1	99	64.643	Cyprinodon_variegatus
ENSPCOG00000012360	LSG1	99	64.947	ENSDARG00000015352	lsg1	99	65.408	Danio_rerio
ENSPCOG00000012360	LSG1	100	84.894	ENSDNOG00000006224	LSG1	100	84.592	Dasypus_novemcinctus
ENSPCOG00000012360	LSG1	99	46.917	FBgn0266284	Ns3	99	46.386	Drosophila_melanogaster
ENSPCOG00000012360	LSG1	88	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSPCOG00000012360	LSG1	88	56.260	ENSEBUG00000003119	lsg1	85	56.616	Eptatretus_burgeri
ENSPCOG00000012360	LSG1	100	86.950	ENSEASG00005000678	LSG1	100	86.950	Equus_asinus_asinus
ENSPCOG00000012360	LSG1	100	87.102	ENSECAG00000017659	LSG1	100	87.102	Equus_caballus
ENSPCOG00000012360	LSG1	88	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSPCOG00000012360	LSG1	99	60.546	ENSELUG00000023973	lsg1	99	60.272	Esox_lucius
ENSPCOG00000012360	LSG1	99	84.650	ENSFCAG00000024957	LSG1	99	84.650	Felis_catus
ENSPCOG00000012360	LSG1	92	66.395	ENSFALG00000007210	LSG1	94	65.534	Ficedula_albicollis
ENSPCOG00000012360	LSG1	100	77.997	ENSFDAG00000017373	LSG1	100	77.727	Fukomys_damarensis
ENSPCOG00000012360	LSG1	97	64.174	ENSFHEG00000003680	lsg1	99	64.060	Fundulus_heteroclitus
ENSPCOG00000012360	LSG1	82	69.547	ENSGMOG00000015834	lsg1	88	69.205	Gadus_morhua
ENSPCOG00000012360	LSG1	99	62.763	ENSGALG00000007058	LSG1	87	63.158	Gallus_gallus
ENSPCOG00000012360	LSG1	97	64.890	ENSGAFG00000015831	lsg1	99	65.496	Gambusia_affinis
ENSPCOG00000012360	LSG1	98	61.963	ENSGACG00000009323	lsg1	99	61.898	Gasterosteus_aculeatus
ENSPCOG00000012360	LSG1	100	87.860	ENSGGOG00000000520	LSG1	100	87.860	Gorilla_gorilla
ENSPCOG00000012360	LSG1	99	63.333	ENSHBUG00000005659	lsg1	99	63.554	Haplochromis_burtoni
ENSPCOG00000012360	LSG1	100	76.090	ENSHGLG00000017390	LSG1	100	76.054	Heterocephalus_glaber_female
ENSPCOG00000012360	LSG1	100	76.090	ENSHGLG00100018587	LSG1	100	76.054	Heterocephalus_glaber_male
ENSPCOG00000012360	LSG1	97	64.119	ENSHCOG00000016848	lsg1	99	64.373	Hippocampus_comes
ENSPCOG00000012360	LSG1	99	64.297	ENSIPUG00000008631	lsg1	99	64.036	Ictalurus_punctatus
ENSPCOG00000012360	LSG1	81	82.460	ENSSTOG00000010234	LSG1	99	84.274	Ictidomys_tridecemlineatus
ENSPCOG00000012360	LSG1	100	80.363	ENSJJAG00000015513	Lsg1	100	80.363	Jaculus_jaculus
ENSPCOG00000012360	LSG1	98	62.074	ENSKMAG00000009681	lsg1	99	62.121	Kryptolebias_marmoratus
ENSPCOG00000012360	LSG1	99	65.008	ENSLACG00000013399	LSG1	99	65.008	Latimeria_chalumnae
ENSPCOG00000012360	LSG1	98	65.639	ENSLOCG00000004918	lsg1	99	64.925	Lepisosteus_oculatus
ENSPCOG00000012360	LSG1	100	84.067	ENSLAFG00000012919	-	100	84.067	Loxodonta_africana
ENSPCOG00000012360	LSG1	100	88.771	ENSMFAG00000039903	LSG1	100	87.253	Macaca_fascicularis
ENSPCOG00000012360	LSG1	100	88.923	ENSMMUG00000010708	LSG1	100	88.923	Macaca_mulatta
ENSPCOG00000012360	LSG1	100	88.771	ENSMNEG00000031538	LSG1	100	87.102	Macaca_nemestrina
ENSPCOG00000012360	LSG1	100	88.619	ENSMLEG00000041184	LSG1	100	88.619	Mandrillus_leucophaeus
ENSPCOG00000012360	LSG1	99	62.500	ENSMAMG00000000470	lsg1	99	62.349	Mastacembelus_armatus
ENSPCOG00000012360	LSG1	99	63.485	ENSMZEG00005017865	lsg1	99	63.705	Maylandia_zebra
ENSPCOG00000012360	LSG1	89	64.906	ENSMGAG00000007050	LSG1	99	64.975	Meleagris_gallopavo
ENSPCOG00000012360	LSG1	96	79.683	ENSMAUG00000016976	Lsg1	97	79.683	Mesocricetus_auratus
ENSPCOG00000012360	LSG1	100	93.323	ENSMICG00000049087	LSG1	100	93.323	Microcebus_murinus
ENSPCOG00000012360	LSG1	100	82.165	ENSMOCG00000022136	Lsg1	100	82.470	Microtus_ochrogaster
ENSPCOG00000012360	LSG1	82	72.517	ENSMMOG00000008884	lsg1	99	70.570	Mola_mola
ENSPCOG00000012360	LSG1	99	57.784	ENSMODG00000019828	LSG1	99	57.784	Monodelphis_domestica
ENSPCOG00000012360	LSG1	100	80.880	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.032	Mus_caroli
ENSPCOG00000012360	LSG1	100	81.184	ENSMUSG00000022538	Lsg1	100	81.335	Mus_musculus
ENSPCOG00000012360	LSG1	98	81.202	MGP_PahariEiJ_G0016352	Lsg1	100	81.364	Mus_pahari
ENSPCOG00000012360	LSG1	100	80.880	MGP_SPRETEiJ_G0021544	Lsg1	100	81.032	Mus_spretus
ENSPCOG00000012360	LSG1	99	82.979	ENSMPUG00000003734	LSG1	99	82.979	Mustela_putorius_furo
ENSPCOG00000012360	LSG1	99	86.343	ENSMLUG00000012548	LSG1	99	86.343	Myotis_lucifugus
ENSPCOG00000012360	LSG1	100	82.389	ENSNGAG00000021872	Lsg1	100	81.470	Nannospalax_galili
ENSPCOG00000012360	LSG1	100	88.467	ENSNLEG00000008293	LSG1	100	88.467	Nomascus_leucogenys
ENSPCOG00000012360	LSG1	68	68.539	ENSMEUG00000009041	-	82	69.006	Notamacropus_eugenii
ENSPCOG00000012360	LSG1	99	62.930	ENSONIG00000002635	lsg1	99	62.991	Oreochromis_niloticus
ENSPCOG00000012360	LSG1	95	71.090	ENSOANG00000012742	LSG1	99	71.044	Ornithorhynchus_anatinus
ENSPCOG00000012360	LSG1	100	86.343	ENSOCUG00000004817	LSG1	100	86.343	Oryctolagus_cuniculus
ENSPCOG00000012360	LSG1	98	63.537	ENSORLG00000007695	lsg1	99	63.957	Oryzias_latipes
ENSPCOG00000012360	LSG1	98	63.067	ENSORLG00020016286	lsg1	99	62.577	Oryzias_latipes_hni
ENSPCOG00000012360	LSG1	98	63.224	ENSORLG00015012025	lsg1	99	63.190	Oryzias_latipes_hsok
ENSPCOG00000012360	LSG1	98	62.074	ENSOMEG00000022379	lsg1	99	62.671	Oryzias_melastigma
ENSPCOG00000012360	LSG1	100	89.140	ENSOGAG00000003475	LSG1	100	89.140	Otolemur_garnettii
ENSPCOG00000012360	LSG1	99	83.156	ENSOARG00000020403	LSG1	99	82.549	Ovis_aries
ENSPCOG00000012360	LSG1	100	87.102	ENSPPAG00000029271	LSG1	100	87.102	Pan_paniscus
ENSPCOG00000012360	LSG1	99	84.060	ENSPPRG00000010281	LSG1	99	84.060	Panthera_pardus
ENSPCOG00000012360	LSG1	99	85.106	ENSPTIG00000010789	LSG1	99	85.106	Panthera_tigris_altaica
ENSPCOG00000012360	LSG1	100	86.950	ENSPTRG00000015760	LSG1	100	86.950	Pan_troglodytes
ENSPCOG00000012360	LSG1	100	88.467	ENSPANG00000018249	LSG1	100	86.950	Papio_anubis
ENSPCOG00000012360	LSG1	96	63.191	ENSPKIG00000002895	lsg1	100	62.632	Paramormyrops_kingsleyae
ENSPCOG00000012360	LSG1	96	65.278	ENSPSIG00000009821	LSG1	99	64.961	Pelodiscus_sinensis
ENSPCOG00000012360	LSG1	95	62.957	ENSPMGG00000000931	lsg1	99	62.639	Periophthalmus_magnuspinnatus
ENSPCOG00000012360	LSG1	100	81.873	ENSPEMG00000012082	-	100	81.420	Peromyscus_maniculatus_bairdii
ENSPCOG00000012360	LSG1	99	59.220	ENSPMAG00000007451	lsg1	99	59.070	Petromyzon_marinus
ENSPCOG00000012360	LSG1	99	68.421	ENSPCIG00000013890	LSG1	81	68.421	Phascolarctos_cinereus
ENSPCOG00000012360	LSG1	97	63.256	ENSPFOG00000021882	lsg1	99	64.297	Poecilia_formosa
ENSPCOG00000012360	LSG1	97	64.006	ENSPLAG00000019536	lsg1	99	64.733	Poecilia_latipinna
ENSPCOG00000012360	LSG1	97	62.442	ENSPMEG00000017281	lsg1	99	63.499	Poecilia_mexicana
ENSPCOG00000012360	LSG1	97	55.194	ENSPREG00000006048	lsg1	99	55.438	Poecilia_reticulata
ENSPCOG00000012360	LSG1	92	87.007	ENSPPYG00000014425	LSG1	100	86.184	Pongo_abelii
ENSPCOG00000012360	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSPCOG00000012360	LSG1	99	63.008	ENSPNYG00000021994	lsg1	99	63.182	Pundamilia_nyererei
ENSPCOG00000012360	LSG1	99	64.857	ENSPNAG00000015533	lsg1	99	64.750	Pygocentrus_nattereri
ENSPCOG00000012360	LSG1	100	81.146	ENSRNOG00000001727	Lsg1	100	81.146	Rattus_norvegicus
ENSPCOG00000012360	LSG1	100	87.709	ENSRBIG00000029053	LSG1	100	87.709	Rhinopithecus_bieti
ENSPCOG00000012360	LSG1	100	87.709	ENSRROG00000037702	LSG1	100	87.709	Rhinopithecus_roxellana
ENSPCOG00000012360	LSG1	74	47.009	YGL099W	LSG1	74	47.436	Saccharomyces_cerevisiae
ENSPCOG00000012360	LSG1	100	88.467	ENSSBOG00000034938	LSG1	100	88.467	Saimiri_boliviensis_boliviensis
ENSPCOG00000012360	LSG1	78	66.730	ENSSHAG00000003487	LSG1	99	65.478	Sarcophilus_harrisii
ENSPCOG00000012360	LSG1	98	62.043	ENSSFOG00015008955	lsg1	99	62.651	Scleropages_formosus
ENSPCOG00000012360	LSG1	98	64.067	ENSSDUG00000004622	lsg1	99	63.308	Seriola_dumerili
ENSPCOG00000012360	LSG1	98	64.186	ENSSLDG00000010869	lsg1	99	63.374	Seriola_lalandi_dorsalis
ENSPCOG00000012360	LSG1	81	81.471	ENSSARG00000012981	LSG1	81	81.471	Sorex_araneus
ENSPCOG00000012360	LSG1	99	66.617	ENSSPUG00000016347	LSG1	99	66.119	Sphenodon_punctatus
ENSPCOG00000012360	LSG1	99	62.901	ENSSPAG00000005508	lsg1	99	63.053	Stegastes_partitus
ENSPCOG00000012360	LSG1	99	83.739	ENSSSCG00000011827	LSG1	99	83.131	Sus_scrofa
ENSPCOG00000012360	LSG1	89	63.773	ENSTGUG00000009068	LSG1	99	64.107	Taeniopygia_guttata
ENSPCOG00000012360	LSG1	97	61.346	ENSTRUG00000017380	lsg1	99	59.969	Takifugu_rubripes
ENSPCOG00000012360	LSG1	97	63.975	ENSTNIG00000015570	lsg1	99	63.788	Tetraodon_nigroviridis
ENSPCOG00000012360	LSG1	99	76.783	ENSTTRG00000000559	LSG1	99	76.024	Tursiops_truncatus
ENSPCOG00000012360	LSG1	99	83.891	ENSUAMG00000012454	LSG1	99	83.891	Ursus_americanus
ENSPCOG00000012360	LSG1	99	83.891	ENSUMAG00000000855	LSG1	99	83.891	Ursus_maritimus
ENSPCOG00000012360	LSG1	95	80.000	ENSVPAG00000012400	LSG1	99	80.000	Vicugna_pacos
ENSPCOG00000012360	LSG1	95	84.653	ENSVVUG00000008956	LSG1	97	84.653	Vulpes_vulpes
ENSPCOG00000012360	LSG1	99	64.715	ENSXETG00000003451	lsg1	99	64.571	Xenopus_tropicalis
ENSPCOG00000012360	LSG1	97	64.798	ENSXCOG00000003239	lsg1	99	64.894	Xiphophorus_couchianus
ENSPCOG00000012360	LSG1	97	64.476	ENSXMAG00000005536	lsg1	99	64.580	Xiphophorus_maculatus