EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000012450 (Gene tree)
Gene ID: 105816377
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 12368 bases
Position: chrKQ023402.1:98463-110830
Accession: 105816377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000004307	MBD	PF01429.19	2.5e-16	1	1
ENSPCOP00000004311	MBD	PF01429.19	2.5e-16	1	1
ENSPCOP00000004286	MBD	PF01429.19	2.6e-16	1	1
ENSPCOP00000004315	MBD	PF01429.19	2.6e-16	1	1
ENSPCOP00000004313	MBD	PF01429.19	2.9e-16	1	1
ENSPCOP00000004314	MBD	PF01429.19	2.9e-16	1	1
ENSPCOP00000004306	MBD	PF01429.19	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000014339	MBD1-206	1797	-	ENSPCOP00000004314	598 (aa)	-	A0A2K6ERF5
ENSPCOT00000014321	MBD1-202	1971	XM_012651762	ENSPCOP00000004306	656 (aa)	XP_012507216	A0A2K6ERF3
ENSPCOT00000014322	MBD1-203	1764	-	ENSPCOP00000004307	587 (aa)	-	A0A2K6ERE8
ENSPCOT00000014330	MBD1-204	1635	-	ENSPCOP00000004311	544 (aa)	-	A0A2K6ERF8
ENSPCOT00000014278	MBD1-201	1707	-	ENSPCOP00000004286	569 (aa)	-	A0A2K6ERC9
ENSPCOT00000014336	MBD1-205	1821	XM_012651764	ENSPCOP00000004313	606 (aa)	XP_012507218	A0A2K6ERF4
ENSPCOT00000014341	MBD1-207	1653	XM_012651774	ENSPCOP00000004315	550 (aa)	XP_012507228	A0A2K6ERG9

Gene Model

Click here to download ENSPCOG00000012450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000012450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000012450	MBD1	100	92.739	ENSG00000141644	MBD1	99	94.815	Homo_sapiens
ENSPCOG00000012450	MBD1	100	86.222	ENSAMEG00000000238	MBD1	96	84.968	Ailuropoda_melanoleuca
ENSPCOG00000012450	MBD1	53	52.222	ENSAOCG00000020272	mbd1b	52	30.655	Amphiprion_ocellaris
ENSPCOG00000012450	MBD1	70	44.769	ENSACAG00000006091	-	100	44.802	Anolis_carolinensis
ENSPCOG00000012450	MBD1	99	90.534	ENSANAG00000036253	MBD1	99	90.534	Aotus_nancymaae
ENSPCOG00000012450	MBD1	100	89.024	ENSBTAG00000003801	MBD1	100	87.644	Bos_taurus
ENSPCOG00000012450	MBD1	100	90.222	ENSCJAG00000004959	MBD1	99	90.840	Callithrix_jacchus
ENSPCOG00000012450	MBD1	100	85.333	ENSCAFG00000018928	MBD1	96	84.945	Canis_familiaris
ENSPCOG00000012450	MBD1	99	84.109	ENSCAFG00020024272	MBD1	98	83.201	Canis_lupus_dingo
ENSPCOG00000012450	MBD1	100	89.602	ENSCHIG00000021134	MBD1	100	87.479	Capra_hircus
ENSPCOG00000012450	MBD1	99	89.924	ENSTSYG00000000509	MBD1	99	89.924	Carlito_syrichta
ENSPCOG00000012450	MBD1	99	73.616	ENSCAPG00000015782	MBD1	96	72.711	Cavia_aperea
ENSPCOG00000012450	MBD1	100	85.778	ENSCPOG00000001671	MBD1	91	85.778	Cavia_porcellus
ENSPCOG00000012450	MBD1	100	89.968	ENSCCAG00000034600	MBD1	99	89.008	Cebus_capucinus
ENSPCOG00000012450	MBD1	100	92.739	ENSCATG00000029959	MBD1	100	92.739	Cercocebus_atys
ENSPCOG00000012450	MBD1	100	86.222	ENSCLAG00000007457	MBD1	89	83.677	Chinchilla_lanigera
ENSPCOG00000012450	MBD1	100	92.904	ENSCSAG00000018070	MBD1	100	92.904	Chlorocebus_sabaeus
ENSPCOG00000012450	MBD1	100	92.574	ENSCANG00000033425	MBD1	100	92.574	Colobus_angolensis_palliatus
ENSPCOG00000012450	MBD1	100	76.524	ENSCGRG00001014843	Mbd1	100	75.738	Cricetulus_griseus_chok1gshd
ENSPCOG00000012450	MBD1	99	66.667	ENSCGRG00000014135	Mbd1	96	66.667	Cricetulus_griseus_crigri
ENSPCOG00000012450	MBD1	52	50.000	ENSCVAG00000001167	mbd1b	51	35.000	Cyprinodon_variegatus
ENSPCOG00000012450	MBD1	100	82.955	ENSDNOG00000015998	MBD1	100	81.458	Dasypus_novemcinctus
ENSPCOG00000012450	MBD1	99	78.637	ENSDORG00000013917	Mbd1	97	79.558	Dipodomys_ordii
ENSPCOG00000012450	MBD1	99	88.415	ENSEASG00005003857	MBD1	99	88.567	Equus_asinus_asinus
ENSPCOG00000012450	MBD1	100	88.962	ENSECAG00000011497	MBD1	80	89.127	Equus_caballus
ENSPCOG00000012450	MBD1	75	52.174	ENSELUG00000004375	mbd1b	52	52.174	Esox_lucius
ENSPCOG00000012450	MBD1	99	87.805	ENSFCAG00000015730	MBD1	99	87.805	Felis_catus
ENSPCOG00000012450	MBD1	99	80.762	ENSFDAG00000011085	MBD1	95	83.178	Fukomys_damarensis
ENSPCOG00000012450	MBD1	76	36.318	ENSFHEG00000020120	mbd1b	51	35.000	Fundulus_heteroclitus
ENSPCOG00000012450	MBD1	70	35.859	ENSGAFG00000008975	mbd1b	53	35.644	Gambusia_affinis
ENSPCOG00000012450	MBD1	70	31.186	ENSGACG00000012106	-	58	33.062	Gasterosteus_aculeatus
ENSPCOG00000012450	MBD1	100	92.574	ENSGGOG00000016966	MBD1	100	92.574	Gorilla_gorilla
ENSPCOG00000012450	MBD1	100	87.294	ENSHGLG00000008740	MBD1	100	87.294	Heterocephalus_glaber_female
ENSPCOG00000012450	MBD1	100	77.565	ENSHGLG00100005198	MBD1	94	87.732	Heterocephalus_glaber_male
ENSPCOG00000012450	MBD1	100	84.091	ENSSTOG00000007780	MBD1	100	84.091	Ictidomys_tridecemlineatus
ENSPCOG00000012450	MBD1	98	79.667	ENSJJAG00000022859	Mbd1	96	80.591	Jaculus_jaculus
ENSPCOG00000012450	MBD1	87	37.524	ENSLACG00000002414	-	78	36.742	Latimeria_chalumnae
ENSPCOG00000012450	MBD1	99	76.119	ENSLAFG00000031328	MBD1	98	75.286	Loxodonta_africana
ENSPCOG00000012450	MBD1	100	92.739	ENSMFAG00000026335	MBD1	100	92.739	Macaca_fascicularis
ENSPCOG00000012450	MBD1	100	91.556	ENSMMUG00000009050	MBD1	100	89.065	Macaca_mulatta
ENSPCOG00000012450	MBD1	100	92.739	ENSMNEG00000038822	MBD1	100	92.739	Macaca_nemestrina
ENSPCOG00000012450	MBD1	100	92.739	ENSMLEG00000043121	MBD1	100	92.739	Mandrillus_leucophaeus
ENSPCOG00000012450	MBD1	50	79.705	ENSMAUG00000021798	-	97	80.370	Mesocricetus_auratus
ENSPCOG00000012450	MBD1	100	95.122	ENSMICG00000006414	MBD1	100	95.741	Microcebus_murinus
ENSPCOG00000012450	MBD1	50	77.656	ENSMOCG00000011976	-	93	79.167	Microtus_ochrogaster
ENSPCOG00000012450	MBD1	72	41.191	ENSMODG00000001286	-	58	44.588	Monodelphis_domestica
ENSPCOG00000012450	MBD1	50	56.491	ENSMODG00000010534	-	99	57.295	Monodelphis_domestica
ENSPCOG00000012450	MBD1	99	70.739	ENSMUSG00000024561	Mbd1	98	68.603	Mus_musculus
ENSPCOG00000012450	MBD1	100	71.014	MGP_PahariEiJ_G0019128	Mbd1	100	69.206	Mus_pahari
ENSPCOG00000012450	MBD1	98	71.839	MGP_SPRETEiJ_G0023304	Mbd1	99	71.036	Mus_spretus
ENSPCOG00000012450	MBD1	100	84.652	ENSMPUG00000008843	MBD1	96	84.652	Mustela_putorius_furo
ENSPCOG00000012450	MBD1	100	82.567	ENSMLUG00000008286	MBD1	96	82.567	Myotis_lucifugus
ENSPCOG00000012450	MBD1	98	77.495	ENSNGAG00000011412	Mbd1	96	77.495	Nannospalax_galili
ENSPCOG00000012450	MBD1	100	92.079	ENSNLEG00000011661	-	100	92.079	Nomascus_leucogenys
ENSPCOG00000012450	MBD1	98	82.309	ENSNLEG00000032711	-	99	76.792	Nomascus_leucogenys
ENSPCOG00000012450	MBD1	100	80.734	ENSOPRG00000007647	MBD1	100	74.587	Ochotona_princeps
ENSPCOG00000012450	MBD1	99	83.948	ENSODEG00000018451	MBD1	97	83.948	Octodon_degus
ENSPCOG00000012450	MBD1	65	36.310	ENSONIG00000020289	mbd1b	52	34.783	Oreochromis_niloticus
ENSPCOG00000012450	MBD1	91	48.282	ENSOANG00000014593	-	100	48.507	Ornithorhynchus_anatinus
ENSPCOG00000012450	MBD1	100	86.222	ENSOCUG00000006554	MBD1	100	82.726	Oryctolagus_cuniculus
ENSPCOG00000012450	MBD1	50	58.333	ENSORLG00020000575	mbd1b	53	56.923	Oryzias_latipes_hni
ENSPCOG00000012450	MBD1	50	58.333	ENSOMEG00000023660	mbd1b	53	58.462	Oryzias_melastigma
ENSPCOG00000012450	MBD1	100	86.580	ENSOGAG00000003784	MBD1	96	85.469	Otolemur_garnettii
ENSPCOG00000012450	MBD1	100	83.728	ENSOARG00000004218	MBD1	95	83.728	Ovis_aries
ENSPCOG00000012450	MBD1	100	92.574	ENSPPAG00000038886	MBD1	100	92.574	Pan_paniscus
ENSPCOG00000012450	MBD1	100	89.127	ENSPPRG00000021387	MBD1	100	89.127	Panthera_pardus
ENSPCOG00000012450	MBD1	100	88.962	ENSPTIG00000021231	MBD1	100	88.962	Panthera_tigris_altaica
ENSPCOG00000012450	MBD1	100	92.574	ENSPTRG00000010021	MBD1	100	92.574	Pan_troglodytes
ENSPCOG00000012450	MBD1	100	91.556	ENSPANG00000010867	MBD1	99	92.061	Papio_anubis
ENSPCOG00000012450	MBD1	99	68.683	ENSPEMG00000022630	Mbd1	97	68.627	Peromyscus_maniculatus_bairdii
ENSPCOG00000012450	MBD1	91	56.106	ENSPCIG00000027937	-	86	44.356	Phascolarctos_cinereus
ENSPCOG00000012450	MBD1	52	52.174	ENSPFOG00000007511	mbd1b	53	35.644	Poecilia_formosa
ENSPCOG00000012450	MBD1	52	52.174	ENSPLAG00000021258	mbd1b	53	35.644	Poecilia_latipinna
ENSPCOG00000012450	MBD1	65	52.174	ENSPMEG00000024145	mbd1b	51	35.204	Poecilia_mexicana
ENSPCOG00000012450	MBD1	52	52.174	ENSPREG00000021805	mbd1b	53	35.644	Poecilia_reticulata
ENSPCOG00000012450	MBD1	100	92.574	ENSPPYG00000009158	MBD1	91	92.574	Pongo_abelii
ENSPCOG00000012450	MBD1	99	77.025	ENSPCAG00000001648	MBD1	99	77.025	Procavia_capensis
ENSPCOG00000012450	MBD1	99	59.397	ENSRNOG00000024104	Mbd1	96	60.357	Rattus_norvegicus
ENSPCOG00000012450	MBD1	100	91.111	ENSRBIG00000041294	MBD1	98	90.018	Rhinopithecus_bieti
ENSPCOG00000012450	MBD1	100	92.409	ENSRROG00000032517	MBD1	100	92.409	Rhinopithecus_roxellana
ENSPCOG00000012450	MBD1	100	91.111	ENSSBOG00000027169	MBD1	99	90.840	Saimiri_boliviensis_boliviensis
ENSPCOG00000012450	MBD1	85	43.918	ENSSHAG00000003661	-	100	47.974	Sarcophilus_harrisii
ENSPCOG00000012450	MBD1	71	34.653	ENSSPAG00000021447	mbd1b	55	35.468	Stegastes_partitus
ENSPCOG00000012450	MBD1	100	89.602	ENSSSCG00000004516	MBD1	100	86.964	Sus_scrofa
ENSPCOG00000012450	MBD1	72	85.776	ENSTBEG00000012651	-	68	85.000	Tupaia_belangeri
ENSPCOG00000012450	MBD1	100	89.329	ENSTTRG00000015523	MBD1	100	86.161	Tursiops_truncatus
ENSPCOG00000012450	MBD1	100	84.158	ENSUAMG00000004752	MBD1	100	84.539	Ursus_americanus
ENSPCOG00000012450	MBD1	100	88.797	ENSUMAG00000002947	MBD1	100	88.797	Ursus_maritimus
ENSPCOG00000012450	MBD1	70	35.859	ENSXMAG00000005628	mbd1b	52	35.644	Xiphophorus_maculatus