EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000013957 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 25912 bases
Position: chrKQ015644.1:809417-835328
Accession: 105805011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000005850	APOBEC_N	PF08210.11	2e-27	1	1
ENSPCOP00000005850	APOBEC_C	PF05240.14	7.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000016297	APOBEC1-201	681	XM_012637792	ENSPCOP00000005850	226 (aa)	XP_012493246	A0A2K6EVT9

Gene Model

Click here to download ENSPCOG00000013957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000013957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000013957	APOBEC1	100	80.508	ENSG00000111701	APOBEC1	100	80.508	Homo_sapiens
ENSPCOG00000013957	APOBEC1	99	81.333	ENSAMEG00000007098	APOBEC1	95	81.333	Ailuropoda_melanoleuca
ENSPCOG00000013957	APOBEC1	75	41.176	ENSACAG00000028578	-	93	41.176	Anolis_carolinensis
ENSPCOG00000013957	APOBEC1	98	80.180	ENSANAG00000027743	APOBEC1	90	80.180	Aotus_nancymaae
ENSPCOG00000013957	APOBEC1	98	72.072	ENSBTAG00000014683	APOBEC1	94	72.072	Bos_taurus
ENSPCOG00000013957	APOBEC1	98	80.543	ENSCJAG00000005398	APOBEC1	100	80.543	Callithrix_jacchus
ENSPCOG00000013957	APOBEC1	98	79.730	ENSCAFG00000013901	APOBEC1	94	79.730	Canis_familiaris
ENSPCOG00000013957	APOBEC1	98	80.543	ENSCAFG00020003511	APOBEC1	92	80.543	Canis_lupus_dingo
ENSPCOG00000013957	APOBEC1	98	72.523	ENSCHIG00000011898	APOBEC1	99	68.996	Capra_hircus
ENSPCOG00000013957	APOBEC1	58	83.077	ENSTSYG00000029141	APOBEC1	92	83.077	Carlito_syrichta
ENSPCOG00000013957	APOBEC1	95	70.233	ENSCAPG00000015882	-	100	70.233	Cavia_aperea
ENSPCOG00000013957	APOBEC1	98	67.873	ENSCPOG00000033068	APOBEC1	94	67.873	Cavia_porcellus
ENSPCOG00000013957	APOBEC1	98	81.982	ENSCCAG00000022258	APOBEC1	94	81.982	Cebus_capucinus
ENSPCOG00000013957	APOBEC1	98	85.586	ENSCATG00000021613	APOBEC1	90	85.586	Cercocebus_atys
ENSPCOG00000013957	APOBEC1	96	70.833	ENSCLAG00000014645	APOBEC1	94	70.833	Chinchilla_lanigera
ENSPCOG00000013957	APOBEC1	84	84.211	ENSCSAG00000009817	APOBEC1	99	84.211	Chlorocebus_sabaeus
ENSPCOG00000013957	APOBEC1	84	45.641	ENSCPBG00000014328	-	85	45.641	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	77	45.198	ENSCPBG00000014335	-	72	45.198	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	92	38.571	ENSCPBG00000014331	-	84	38.571	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	73	47.929	ENSCPBG00000017398	-	74	47.929	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	88	46.500	ENSCPBG00000014329	-	55	46.500	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	82	46.809	ENSCPBG00000014327	-	70	46.809	Chrysemys_picta_bellii
ENSPCOG00000013957	APOBEC1	98	84.685	ENSCANG00000038359	APOBEC1	97	84.685	Colobus_angolensis_palliatus
ENSPCOG00000013957	APOBEC1	95	69.767	ENSCGRG00001011130	Apobec1	94	69.767	Cricetulus_griseus_chok1gshd
ENSPCOG00000013957	APOBEC1	95	69.767	ENSCGRG00000008644	Apobec1	94	69.767	Cricetulus_griseus_crigri
ENSPCOG00000013957	APOBEC1	98	78.829	ENSDNOG00000010926	APOBEC1	94	78.829	Dasypus_novemcinctus
ENSPCOG00000013957	APOBEC1	94	65.888	ENSDORG00000023717	Apobec1	100	65.888	Dipodomys_ordii
ENSPCOG00000013957	APOBEC1	97	76.018	ENSETEG00000004867	APOBEC1	94	76.018	Echinops_telfairi
ENSPCOG00000013957	APOBEC1	98	84.685	ENSEASG00005015951	APOBEC1	93	84.685	Equus_asinus_asinus
ENSPCOG00000013957	APOBEC1	84	83.684	ENSECAG00000017163	APOBEC1	99	83.684	Equus_caballus
ENSPCOG00000013957	APOBEC1	90	55.882	ENSEEUG00000007530	-	97	55.882	Erinaceus_europaeus
ENSPCOG00000013957	APOBEC1	97	66.063	ENSEEUG00000009112	-	98	66.063	Erinaceus_europaeus
ENSPCOG00000013957	APOBEC1	98	81.982	ENSFCAG00000009350	APOBEC1	94	81.982	Felis_catus
ENSPCOG00000013957	APOBEC1	63	49.306	ENSFALG00000007257	-	71	49.306	Ficedula_albicollis
ENSPCOG00000013957	APOBEC1	92	60.386	ENSFDAG00000018470	APOBEC1	99	60.386	Fukomys_damarensis
ENSPCOG00000013957	APOBEC1	85	44.560	ENSGAGG00000021744	-	75	44.560	Gopherus_agassizii
ENSPCOG00000013957	APOBEC1	75	40.805	ENSGAGG00000021745	-	64	40.805	Gopherus_agassizii
ENSPCOG00000013957	APOBEC1	71	48.148	ENSGAGG00000004947	-	83	50.746	Gopherus_agassizii
ENSPCOG00000013957	APOBEC1	89	45.098	ENSGAGG00000011837	-	90	47.619	Gopherus_agassizii
ENSPCOG00000013957	APOBEC1	77	46.286	ENSGAGG00000006624	-	63	46.286	Gopherus_agassizii
ENSPCOG00000013957	APOBEC1	98	64.706	ENSHGLG00000001495	APOBEC1	94	64.706	Heterocephalus_glaber_female
ENSPCOG00000013957	APOBEC1	98	64.706	ENSHGLG00100002187	APOBEC1	94	64.706	Heterocephalus_glaber_male
ENSPCOG00000013957	APOBEC1	95	66.977	ENSSTOG00000021971	APOBEC1	100	80.612	Ictidomys_tridecemlineatus
ENSPCOG00000013957	APOBEC1	95	73.953	ENSJJAG00000022108	Apobec1	94	73.953	Jaculus_jaculus
ENSPCOG00000013957	APOBEC1	98	80.631	ENSLAFG00000030837	APOBEC1	99	80.631	Loxodonta_africana
ENSPCOG00000013957	APOBEC1	100	82.203	ENSMFAG00000000277	APOBEC1	99	85.263	Macaca_fascicularis
ENSPCOG00000013957	APOBEC1	100	81.780	ENSMNEG00000029670	APOBEC1	100	81.780	Macaca_nemestrina
ENSPCOG00000013957	APOBEC1	100	82.627	ENSMLEG00000036301	APOBEC1	100	82.627	Mandrillus_leucophaeus
ENSPCOG00000013957	APOBEC1	95	71.628	ENSMAUG00000022167	Apobec1	97	71.628	Mesocricetus_auratus
ENSPCOG00000013957	APOBEC1	98	92.793	ENSMICG00000043645	APOBEC1	97	92.342	Microcebus_murinus
ENSPCOG00000013957	APOBEC1	98	65.766	ENSMODG00000018004	APOBEC1	94	65.766	Monodelphis_domestica
ENSPCOG00000013957	APOBEC1	95	70.561	ENSMUSG00000040613	Apobec1	93	70.561	Mus_musculus
ENSPCOG00000013957	APOBEC1	95	68.692	MGP_PahariEiJ_G0022580	-	93	68.692	Mus_pahari
ENSPCOG00000013957	APOBEC1	95	70.561	MGP_SPRETEiJ_G0029857	Apobec1	93	70.561	Mus_spretus
ENSPCOG00000013957	APOBEC1	98	79.279	ENSMPUG00000017532	APOBEC1	94	79.279	Mustela_putorius_furo
ENSPCOG00000013957	APOBEC1	95	71.628	ENSNGAG00000022607	Apobec1	94	71.628	Nannospalax_galili
ENSPCOG00000013957	APOBEC1	100	82.203	ENSNLEG00000005342	APOBEC1	100	82.203	Nomascus_leucogenys
ENSPCOG00000013957	APOBEC1	98	64.865	ENSMEUG00000013406	APOBEC1	94	64.865	Notamacropus_eugenii
ENSPCOG00000013957	APOBEC1	76	63.372	ENSOPRG00000009508	-	95	63.372	Ochotona_princeps
ENSPCOG00000013957	APOBEC1	98	77.477	ENSOCUG00000025736	APOBEC1	83	77.477	Oryctolagus_cuniculus
ENSPCOG00000013957	APOBEC1	98	86.036	ENSOGAG00000026415	APOBEC1	94	86.036	Otolemur_garnettii
ENSPCOG00000013957	APOBEC1	98	72.973	ENSOARG00000002072	APOBEC1	93	72.973	Ovis_aries
ENSPCOG00000013957	APOBEC1	98	77.477	ENSPPAG00000027657	APOBEC1	94	77.477	Pan_paniscus
ENSPCOG00000013957	APOBEC1	98	82.432	ENSPPRG00000012182	APOBEC1	94	82.432	Panthera_pardus
ENSPCOG00000013957	APOBEC1	98	82.432	ENSPTIG00000020280	APOBEC1	94	82.432	Panthera_tigris_altaica
ENSPCOG00000013957	APOBEC1	100	80.932	ENSPTRG00000004614	APOBEC1	100	80.932	Pan_troglodytes
ENSPCOG00000013957	APOBEC1	100	82.627	ENSPANG00000021027	APOBEC1	100	82.627	Papio_anubis
ENSPCOG00000013957	APOBEC1	98	41.518	ENSPSIG00000012568	-	94	41.518	Pelodiscus_sinensis
ENSPCOG00000013957	APOBEC1	56	50.000	ENSPSIG00000012791	-	72	50.000	Pelodiscus_sinensis
ENSPCOG00000013957	APOBEC1	95	70.233	ENSPEMG00000023841	Apobec1	94	70.233	Peromyscus_maniculatus_bairdii
ENSPCOG00000013957	APOBEC1	98	67.568	ENSPCIG00000023973	APOBEC1	94	67.568	Phascolarctos_cinereus
ENSPCOG00000013957	APOBEC1	100	80.508	ENSPPYG00000004228	APOBEC1	95	80.508	Pongo_abelii
ENSPCOG00000013957	APOBEC1	77	79.769	ENSPCAG00000008733	APOBEC1	93	79.769	Procavia_capensis
ENSPCOG00000013957	APOBEC1	98	63.964	ENSPVAG00000010709	APOBEC1	94	63.964	Pteropus_vampyrus
ENSPCOG00000013957	APOBEC1	95	68.224	ENSRNOG00000015411	Apobec1	93	68.224	Rattus_norvegicus
ENSPCOG00000013957	APOBEC1	100	81.780	ENSRBIG00000031161	APOBEC1	100	81.780	Rhinopithecus_bieti
ENSPCOG00000013957	APOBEC1	100	81.780	ENSRROG00000033576	APOBEC1	99	84.737	Rhinopithecus_roxellana
ENSPCOG00000013957	APOBEC1	78	80.791	ENSSBOG00000030587	APOBEC1	100	80.791	Saimiri_boliviensis_boliviensis
ENSPCOG00000013957	APOBEC1	98	68.468	ENSSHAG00000008925	APOBEC1	97	68.468	Sarcophilus_harrisii
ENSPCOG00000013957	APOBEC1	76	66.279	ENSSARG00000000032	-	100	66.279	Sorex_araneus
ENSPCOG00000013957	APOBEC1	57	71.318	ENSSARG00000011972	-	98	71.318	Sorex_araneus
ENSPCOG00000013957	APOBEC1	90	40.291	ENSSPUG00000009044	-	79	40.291	Sphenodon_punctatus
ENSPCOG00000013957	APOBEC1	99	77.333	ENSSSCG00000000668	APOBEC1	95	77.333	Sus_scrofa
ENSPCOG00000013957	APOBEC1	63	50.000	ENSTGUG00000013118	-	99	50.000	Taeniopygia_guttata
ENSPCOG00000013957	APOBEC1	98	74.661	ENSTBEG00000010043	APOBEC1	94	74.661	Tupaia_belangeri
ENSPCOG00000013957	APOBEC1	77	73.988	ENSTTRG00000014015	APOBEC1	93	73.988	Tursiops_truncatus
ENSPCOG00000013957	APOBEC1	99	80.889	ENSUAMG00000011636	APOBEC1	92	80.889	Ursus_americanus
ENSPCOG00000013957	APOBEC1	99	80.889	ENSUMAG00000016552	APOBEC1	92	80.889	Ursus_maritimus
ENSPCOG00000013957	APOBEC1	98	75.676	ENSVPAG00000001343	APOBEC1	94	75.676	Vicugna_pacos
ENSPCOG00000013957	APOBEC1	98	80.631	ENSVVUG00000010522	APOBEC1	94	80.631	Vulpes_vulpes