EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000015159 (Gene tree)
Gene ID: 105819864
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 33956 bases
Position: chrKQ024846.1:17392297-17426252
Accession: 105819864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000007802	RRM_1	PF00076.22	1.7e-14	1	1
ENSPCOP00000007800	RRM_1	PF00076.22	2.3e-14	1	1
ENSPCOP00000007804	RRM_1	PF00076.22	1.3e-05	1	1
ENSPCOP00000007803	RRM_1	PF00076.22	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000018347	SLIRP-201	348	-	ENSPCOP00000007800	116 (aa)	-	A0A2K6F1F3
ENSPCOT00000018351	SLIRP-204	228	-	ENSPCOP00000007804	76 (aa)	-	A0A2K6F1H7
ENSPCOT00000018350	SLIRP-203	276	-	ENSPCOP00000007803	91 (aa)	-	A0A2K6F1D5
ENSPCOT00000018349	SLIRP-202	324	XM_012656198	ENSPCOP00000007802	107 (aa)	XP_012511652	A0A2K6F1D7

Gene Model

Click here to download ENSPCOG00000015159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000015159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000015159	SLIRP	65	30.000	ENSPCOG00000026201	RBM38	57	30.000
ENSPCOG00000015159	SLIRP	83	30.769	ENSPCOG00000015793	-	62	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000015159	SLIRP	88	74.545	ENSG00000119705	SLIRP	95	80.556	Homo_sapiens
ENSPCOG00000015159	SLIRP	66	56.579	ENSAPOG00000001298	slirp	76	56.579	Acanthochromis_polyacanthus
ENSPCOG00000015159	SLIRP	85	78.022	ENSAMEG00000003975	SLIRP	100	78.022	Ailuropoda_melanoleuca
ENSPCOG00000015159	SLIRP	92	45.000	ENSACIG00000023083	slirp	99	45.000	Amphilophus_citrinellus
ENSPCOG00000015159	SLIRP	66	59.155	ENSAOCG00000006342	slirp	78	58.442	Amphiprion_ocellaris
ENSPCOG00000015159	SLIRP	76	54.762	ENSAPEG00000015917	slirp	78	58.442	Amphiprion_percula
ENSPCOG00000015159	SLIRP	76	54.762	ENSAPEG00000015719	-	79	58.442	Amphiprion_percula
ENSPCOG00000015159	SLIRP	74	52.326	ENSATEG00000013525	slirp	86	52.326	Anabas_testudineus
ENSPCOG00000015159	SLIRP	67	54.167	ENSAMXG00000018693	slirp	76	52.632	Astyanax_mexicanus
ENSPCOG00000015159	SLIRP	100	70.968	ENSCJAG00000016946	SLIRP	96	77.528	Callithrix_jacchus
ENSPCOG00000015159	SLIRP	100	69.369	ENSCAFG00020015876	-	100	69.369	Canis_lupus_dingo
ENSPCOG00000015159	SLIRP	100	70.968	ENSCCAG00000030130	SLIRP	100	70.968	Cebus_capucinus
ENSPCOG00000015159	SLIRP	100	68.468	ENSCATG00000036327	SLIRP	96	74.157	Cercocebus_atys
ENSPCOG00000015159	SLIRP	90	72.277	ENSCSAG00000011736	SLIRP	100	71.429	Chlorocebus_sabaeus
ENSPCOG00000015159	SLIRP	79	52.941	ENSCPBG00000026327	SLIRP	86	52.941	Chrysemys_picta_bellii
ENSPCOG00000015159	SLIRP	70	76.000	ENSCANG00000032892	SLIRP	91	74.157	Colobus_angolensis_palliatus
ENSPCOG00000015159	SLIRP	100	63.063	ENSCGRG00001024068	Slirp	100	63.063	Cricetulus_griseus_chok1gshd
ENSPCOG00000015159	SLIRP	100	63.063	ENSCGRG00000017440	Slirp	100	63.063	Cricetulus_griseus_crigri
ENSPCOG00000015159	SLIRP	67	59.722	ENSCSEG00000015766	slirp	73	59.722	Cynoglossus_semilaevis
ENSPCOG00000015159	SLIRP	86	43.529	ENSCVAG00000012504	slirp	68	63.768	Cyprinodon_variegatus
ENSPCOG00000015159	SLIRP	68	57.534	ENSDARG00000097753	slirp	97	41.667	Danio_rerio
ENSPCOG00000015159	SLIRP	81	68.132	ENSDNOG00000007721	SLIRP	100	63.964	Dasypus_novemcinctus
ENSPCOG00000015159	SLIRP	100	70.270	ENSDORG00000012379	Slirp	100	70.270	Dipodomys_ordii
ENSPCOG00000015159	SLIRP	90	64.948	ENSETEG00000010345	SLIRP	100	65.741	Echinops_telfairi
ENSPCOG00000015159	SLIRP	100	73.874	ENSEASG00005020193	SLIRP	100	73.874	Equus_asinus_asinus
ENSPCOG00000015159	SLIRP	92	58.416	ENSEEUG00000007257	SLIRP	100	58.416	Erinaceus_europaeus
ENSPCOG00000015159	SLIRP	75	48.193	ENSELUG00000016800	slirp	82	48.193	Esox_lucius
ENSPCOG00000015159	SLIRP	92	75.510	ENSFCAG00000036326	SLIRP	100	75.510	Felis_catus
ENSPCOG00000015159	SLIRP	65	50.000	ENSFALG00000012583	SLIRP	77	46.341	Ficedula_albicollis
ENSPCOG00000015159	SLIRP	91	68.317	ENSFDAG00000008347	SLIRP	89	68.317	Fukomys_damarensis
ENSPCOG00000015159	SLIRP	64	51.724	ENSFHEG00000004709	slirp	85	48.718	Fundulus_heteroclitus
ENSPCOG00000015159	SLIRP	67	55.556	ENSGMOG00000016948	slirp	72	53.333	Gadus_morhua
ENSPCOG00000015159	SLIRP	71	47.674	ENSGALG00000031238	SLIRP	84	47.674	Gallus_gallus
ENSPCOG00000015159	SLIRP	64	60.870	ENSGAFG00000010998	slirp	77	58.442	Gambusia_affinis
ENSPCOG00000015159	SLIRP	66	59.155	ENSGACG00000020137	slirp	83	59.155	Gasterosteus_aculeatus
ENSPCOG00000015159	SLIRP	100	48.649	ENSGAGG00000009953	SLIRP	72	48.649	Gopherus_agassizii
ENSPCOG00000015159	SLIRP	88	74.545	ENSGGOG00000011059	-	96	77.528	Gorilla_gorilla
ENSPCOG00000015159	SLIRP	100	62.162	ENSHGLG00000018491	SLIRP	100	62.162	Heterocephalus_glaber_female
ENSPCOG00000015159	SLIRP	100	62.162	ENSHGLG00100014153	SLIRP	100	62.162	Heterocephalus_glaber_male
ENSPCOG00000015159	SLIRP	68	61.644	ENSHCOG00000006795	slirp	78	58.442	Hippocampus_comes
ENSPCOG00000015159	SLIRP	67	50.000	ENSIPUG00000010214	SLIRP	76	48.684	Ictalurus_punctatus
ENSPCOG00000015159	SLIRP	90	74.000	ENSSTOG00000034316	SLIRP	100	72.973	Ictidomys_tridecemlineatus
ENSPCOG00000015159	SLIRP	80	43.617	ENSKMAG00000002038	slirp	90	43.617	Kryptolebias_marmoratus
ENSPCOG00000015159	SLIRP	80	48.864	ENSLBEG00000007564	slirp	87	50.575	Labrus_bergylta
ENSPCOG00000015159	SLIRP	81	50.000	ENSLACG00000013434	SLIRP	87	50.000	Latimeria_chalumnae
ENSPCOG00000015159	SLIRP	91	69.524	ENSMFAG00000042960	SLIRP	96	76.404	Macaca_fascicularis
ENSPCOG00000015159	SLIRP	90	71.429	ENSMMUG00000029256	SLIRP	96	75.281	Macaca_mulatta
ENSPCOG00000015159	SLIRP	91	69.524	ENSMNEG00000028921	SLIRP	96	76.404	Macaca_nemestrina
ENSPCOG00000015159	SLIRP	100	68.103	ENSMLEG00000043644	SLIRP	100	68.103	Mandrillus_leucophaeus
ENSPCOG00000015159	SLIRP	65	54.286	ENSMZEG00005004617	slirp	78	53.247	Maylandia_zebra
ENSPCOG00000015159	SLIRP	100	65.766	ENSMAUG00000003857	Slirp	100	65.766	Mesocricetus_auratus
ENSPCOG00000015159	SLIRP	100	91.589	ENSMICG00000012080	SLIRP	100	91.589	Microcebus_murinus
ENSPCOG00000015159	SLIRP	98	67.890	ENSMOCG00000016019	Slirp	97	67.890	Microtus_ochrogaster
ENSPCOG00000015159	SLIRP	76	50.000	ENSMMOG00000018268	slirp	88	50.000	Mola_mola
ENSPCOG00000015159	SLIRP	65	71.429	ENSMODG00000005207	-	99	71.429	Monodelphis_domestica
ENSPCOG00000015159	SLIRP	71	51.316	ENSMALG00000012581	slirp	90	43.333	Monopterus_albus
ENSPCOG00000015159	SLIRP	97	68.519	MGP_CAROLIEiJ_G0017995	Slirp	100	68.519	Mus_caroli
ENSPCOG00000015159	SLIRP	98	68.807	ENSMUSG00000021040	Slirp	95	72.340	Mus_musculus
ENSPCOG00000015159	SLIRP	98	68.807	MGP_SPRETEiJ_G0018840	Slirp	97	68.807	Mus_spretus
ENSPCOG00000015159	SLIRP	90	71.000	ENSMLUG00000029544	-	100	69.369	Myotis_lucifugus
ENSPCOG00000015159	SLIRP	85	71.579	ENSMLUG00000024998	-	100	72.072	Myotis_lucifugus
ENSPCOG00000015159	SLIRP	97	69.444	ENSNGAG00000016363	Slirp	100	69.444	Nannospalax_galili
ENSPCOG00000015159	SLIRP	100	69.355	ENSNLEG00000032459	-	100	69.355	Nomascus_leucogenys
ENSPCOG00000015159	SLIRP	93	63.462	ENSNLEG00000027238	-	93	69.136	Nomascus_leucogenys
ENSPCOG00000015159	SLIRP	98	68.807	ENSODEG00000012580	SLIRP	99	71.429	Octodon_degus
ENSPCOG00000015159	SLIRP	80	47.727	ENSONIG00000011692	slirp	89	47.727	Oreochromis_niloticus
ENSPCOG00000015159	SLIRP	97	54.464	ENSOANG00000022366	SLIRP	96	54.464	Ornithorhynchus_anatinus
ENSPCOG00000015159	SLIRP	67	56.944	ENSORLG00000010761	slirp	59	57.895	Oryzias_latipes
ENSPCOG00000015159	SLIRP	67	58.333	ENSORLG00020022188	slirp	76	59.211	Oryzias_latipes_hni
ENSPCOG00000015159	SLIRP	66	57.895	ENSORLG00015020171	slirp	75	57.895	Oryzias_latipes_hsok
ENSPCOG00000015159	SLIRP	70	56.790	ENSOMEG00000019321	slirp	81	56.790	Oryzias_melastigma
ENSPCOG00000015159	SLIRP	88	74.545	ENSPPAG00000040710	-	96	77.528	Pan_paniscus
ENSPCOG00000015159	SLIRP	92	75.510	ENSPPRG00000014350	SLIRP	100	75.510	Panthera_pardus
ENSPCOG00000015159	SLIRP	92	75.510	ENSPTIG00000014196	SLIRP	100	75.510	Panthera_tigris_altaica
ENSPCOG00000015159	SLIRP	88	74.545	ENSPTRG00000030691	SLIRP	96	77.528	Pan_troglodytes
ENSPCOG00000015159	SLIRP	100	69.828	ENSPANG00000026323	SLIRP	96	75.281	Papio_anubis
ENSPCOG00000015159	SLIRP	59	55.556	ENSPKIG00000008831	slirp	64	56.923	Paramormyrops_kingsleyae
ENSPCOG00000015159	SLIRP	66	60.563	ENSPMGG00000010541	slirp	82	60.563	Periophthalmus_magnuspinnatus
ENSPCOG00000015159	SLIRP	88	66.667	ENSPEMG00000013234	Slirp	96	65.455	Peromyscus_maniculatus_bairdii
ENSPCOG00000015159	SLIRP	59	50.794	ENSPMAG00000009355	slirp	80	45.833	Petromyzon_marinus
ENSPCOG00000015159	SLIRP	83	62.637	ENSPCIG00000026842	-	98	62.637	Phascolarctos_cinereus
ENSPCOG00000015159	SLIRP	64	61.765	ENSPFOG00000006758	slirp	77	58.442	Poecilia_formosa
ENSPCOG00000015159	SLIRP	64	61.765	ENSPLAG00000011140	slirp	77	58.442	Poecilia_latipinna
ENSPCOG00000015159	SLIRP	64	61.765	ENSPMEG00000019535	slirp	77	58.442	Poecilia_mexicana
ENSPCOG00000015159	SLIRP	64	61.765	ENSPREG00000011673	slirp	77	58.442	Poecilia_reticulata
ENSPCOG00000015159	SLIRP	88	69.388	ENSPPYG00000006030	SLIRP	97	68.807	Pongo_abelii
ENSPCOG00000015159	SLIRP	71	59.756	ENSPNAG00000008633	slirp	83	59.756	Pygocentrus_nattereri
ENSPCOG00000015159	SLIRP	72	75.325	ENSRBIG00000032998	-	81	73.864	Rhinopithecus_bieti
ENSPCOG00000015159	SLIRP	90	72.000	ENSRBIG00000032222	-	96	75.281	Rhinopithecus_bieti
ENSPCOG00000015159	SLIRP	70	77.333	ENSRBIG00000031396	-	86	75.581	Rhinopithecus_bieti
ENSPCOG00000015159	SLIRP	88	66.327	ENSRBIG00000035817	-	100	66.055	Rhinopithecus_bieti
ENSPCOG00000015159	SLIRP	72	76.623	ENSRROG00000017133	-	92	75.000	Rhinopithecus_roxellana
ENSPCOG00000015159	SLIRP	82	71.910	ENSRROG00000041312	-	99	71.000	Rhinopithecus_roxellana
ENSPCOG00000015159	SLIRP	90	71.000	ENSRROG00000036656	-	100	70.270	Rhinopithecus_roxellana
ENSPCOG00000015159	SLIRP	70	76.000	ENSRROG00000035604	-	86	74.419	Rhinopithecus_roxellana
ENSPCOG00000015159	SLIRP	99	70.732	ENSSBOG00000020014	SLIRP	96	74.157	Saimiri_boliviensis_boliviensis
ENSPCOG00000015159	SLIRP	64	64.706	ENSSFOG00015011165	slirp	77	59.211	Scleropages_formosus
ENSPCOG00000015159	SLIRP	89	38.947	ENSSMAG00000012930	slirp	84	38.947	Scophthalmus_maximus
ENSPCOG00000015159	SLIRP	65	58.571	ENSSDUG00000021883	slirp	59	42.222	Seriola_dumerili
ENSPCOG00000015159	SLIRP	65	58.571	ENSSLDG00000023136	slirp	68	57.333	Seriola_lalandi_dorsalis
ENSPCOG00000015159	SLIRP	66	53.521	ENSSPUG00000009346	SLIRP	72	53.521	Sphenodon_punctatus
ENSPCOG00000015159	SLIRP	70	57.333	ENSSPAG00000013477	slirp	76	56.579	Stegastes_partitus
ENSPCOG00000015159	SLIRP	100	71.171	ENSSSCG00000028167	SLIRP	100	71.171	Sus_scrofa
ENSPCOG00000015159	SLIRP	64	51.471	ENSTGUG00000012337	SLIRP	78	45.783	Taeniopygia_guttata
ENSPCOG00000015159	SLIRP	78	47.253	ENSTRUG00000020127	slirp	90	47.253	Takifugu_rubripes
ENSPCOG00000015159	SLIRP	100	74.775	ENSUAMG00000022445	SLIRP	100	74.775	Ursus_americanus
ENSPCOG00000015159	SLIRP	100	75.676	ENSUMAG00000007166	SLIRP	100	75.676	Ursus_maritimus
ENSPCOG00000015159	SLIRP	100	68.468	ENSVPAG00000001781	SLIRP	100	68.468	Vicugna_pacos
ENSPCOG00000015159	SLIRP	86	72.917	ENSVVUG00000004436	SLIRP	100	71.171	Vulpes_vulpes
ENSPCOG00000015159	SLIRP	65	54.286	ENSXETG00000030343	SLIRP	79	54.286	Xenopus_tropicalis
ENSPCOG00000015159	SLIRP	64	57.353	ENSXCOG00000009422	slirp	89	43.333	Xiphophorus_couchianus
ENSPCOG00000015159	SLIRP	64	58.824	ENSXMAG00000015655	slirp	77	55.844	Xiphophorus_maculatus