EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000015454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60 kDa SS-A/Ro ribonucleoprotein pseudogene
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 790 bases
Position: chrKQ023736.1:5083508-5084297
Accession: 105817177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000008347	TROVE	PF05731.11	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000018900	-	771	-	ENSPCOP00000008347	256 (aa)	-	A0A2K6F2X9

Gene Model

Click here to download ENSPCOG00000015454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000015454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000015454	-	100	89.734	ENSG00000116747	RO60	100	89.734	Homo_sapiens
ENSPCOG00000015454	-	100	36.655	ENSACLG00000012217	trove2	50	36.655	Astatotilapia_calliptera
ENSPCOG00000015454	-	100	88.973	ENSCAFG00020004457	TROVE2	50	88.973	Canis_lupus_dingo
ENSPCOG00000015454	-	98	35.115	ENSCSAVG00000008738	-	83	35.115	Ciona_savignyi
ENSPCOG00000015454	-	100	81.749	ENSETEG00000018261	TROVE2	76	81.749	Echinops_telfairi
ENSPCOG00000015454	-	100	89.354	ENSMMUG00000022643	TROVE2	100	89.354	Macaca_mulatta
ENSPCOG00000015454	-	100	37.011	ENSMZEG00005008107	trove2	50	37.011	Maylandia_zebra
ENSPCOG00000015454	-	100	47.348	ENSMMOG00000017049	trove2	50	46.743	Mola_mola
ENSPCOG00000015454	-	100	60.837	ENSOPRG00000017247	TROVE2	66	60.837	Ochotona_princeps
ENSPCOG00000015454	-	100	37.367	ENSONIG00000018579	trove2	51	37.367	Oreochromis_niloticus
ENSPCOG00000015454	-	100	45.076	ENSORLG00020009759	trove2	100	45.076	Oryzias_latipes_hni
ENSPCOG00000015454	-	100	43.015	ENSOMEG00000010440	trove2	50	43.015	Oryzias_melastigma
ENSPCOG00000015454	-	100	50.379	ENSPKIG00000018217	trove2	51	50.379	Paramormyrops_kingsleyae
ENSPCOG00000015454	-	100	43.295	ENSPMGG00000009282	-	100	43.295	Periophthalmus_magnuspinnatus
ENSPCOG00000015454	-	100	37.011	ENSPNYG00000020148	trove2	50	37.011	Pundamilia_nyererei
ENSPCOG00000015454	-	100	76.806	ENSSPUG00000014304	TROVE2	100	76.806	Sphenodon_punctatus
ENSPCOG00000015454	-	100	73.384	ENSTGUG00000004126	TROVE2	51	73.384	Taeniopygia_guttata