EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000016051 (Gene tree)
Gene ID: 105813757
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 10177 bases
Position: chrKQ022502.1:1060471-1070647
Accession: 105813757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000009376	PRP38	PF03371.15	1.8e-57	1	1
ENSPCOP00000009377	PRP38	PF03371.15	8.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000019944	PRPF38B-203	573	-	ENSPCOP00000009377	190 (aa)	-	A0A2K6F5V6
ENSPCOT00000019943	PRPF38B-202	2746	XM_012648540	ENSPCOP00000009376	544 (aa)	XP_012503994	A0A2K6F5V2
ENSPCOT00000019942	PRPF38B-201	576	-	ENSPCOP00000009375	191 (aa)	-	A0A2K6F5V3

Gene Model

Click here to download ENSPCOG00000016051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000016051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000016051	PRPF38B	100	97.895	ENSCJAG00000002510	-	100	97.436	Callithrix_jacchus
ENSPCOG00000016051	PRPF38B	80	94.253	ENSTSYG00000029817	PRPF38B	97	94.062	Carlito_syrichta
ENSPCOG00000016051	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSPCOG00000016051	PRPF38B	100	98.718	ENSCSAG00000001531	PRPF38B	100	98.718	Chlorocebus_sabaeus
ENSPCOG00000016051	PRPF38B	100	100.000	ENSCANG00000027711	PRPF38B	100	100.000	Colobus_angolensis_palliatus
ENSPCOG00000016051	PRPF38B	100	97.895	ENSLAFG00000017112	PRPF38B	100	97.619	Loxodonta_africana
ENSPCOG00000016051	PRPF38B	100	100.000	ENSMMUG00000010155	PRPF38B	100	100.000	Macaca_mulatta
ENSPCOG00000016051	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSPCOG00000016051	PRPF38B	100	100.000	ENSMICG00000032109	PRPF38B	100	100.000	Microcebus_murinus
ENSPCOG00000016051	PRPF38B	80	95.632	ENSODEG00000007646	PRPF38B	97	95.487	Octodon_degus
ENSPCOG00000016051	PRPF38B	83	97.797	ENSOCUG00000027424	PRPF38B	100	97.797	Oryctolagus_cuniculus
ENSPCOG00000016051	PRPF38B	100	98.168	ENSPPYG00000001092	PRPF38B	100	98.168	Pongo_abelii
ENSPCOG00000016051	PRPF38B	100	100.000	ENSRBIG00000043351	PRPF38B	100	100.000	Rhinopithecus_bieti
ENSPCOG00000016051	PRPF38B	100	100.000	ENSRROG00000029232	PRPF38B	100	100.000	Rhinopithecus_roxellana