EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000016461 (Gene tree)
Gene ID: 105817842
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 14154 bases
Position: chrKQ014211.1:6588854-6603007
Accession: 105817842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000010057	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000020632	RAB5B-201	1822	XM_012653643	ENSPCOP00000010057	215 (aa)	XP_012509097	A0A2K6F7T6
ENSPCOT00000020635	RAB5B-202	525	-	ENSPCOP00000010060	174 (aa)	-	A0A2K6F7U3
ENSPCOT00000020636	RAB5B-203	255	-	ENSPCOP00000010061	84 (aa)	-	A0A2K6F7X7

Gene Model

Click here to download ENSPCOG00000016461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000016461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000016461	RAB5B	74	38.125	ENSPCOG00000028471	RAB23	67	38.125
ENSPCOG00000016461	RAB5B	75	43.478	ENSPCOG00000020717	RAB2A	76	43.478
ENSPCOG00000016461	RAB5B	90	47.938	ENSPCOG00000019205	RAB22A	98	47.938
ENSPCOG00000016461	RAB5B	90	37.949	ENSPCOG00000026153	RAB35	96	37.949
ENSPCOG00000016461	RAB5B	62	30.282	ENSPCOG00000024352	ARL8A	73	30.282
ENSPCOG00000016461	RAB5B	82	39.344	ENSPCOG00000014314	RAB33B	79	39.344
ENSPCOG00000016461	RAB5B	78	42.857	ENSPCOG00000017316	RAB30	83	42.857
ENSPCOG00000016461	RAB5B	91	43.689	ENSPCOG00000028053	RAB11B	96	43.137
ENSPCOG00000016461	RAB5B	77	45.783	ENSPCOG00000018146	RAB6B	80	45.783
ENSPCOG00000016461	RAB5B	90	43.367	ENSPCOG00000017244	RAB1A	95	43.367
ENSPCOG00000016461	RAB5B	82	33.333	ENSPCOG00000021838	HRAS	96	33.333
ENSPCOG00000016461	RAB5B	91	45.918	ENSPCOG00000022692	RAB31	98	45.918
ENSPCOG00000016461	RAB5B	91	41.176	ENSPCOG00000015802	-	94	41.176
ENSPCOG00000016461	RAB5B	73	36.875	ENSPCOG00000027432	RAB36	52	36.875
ENSPCOG00000016461	RAB5B	91	40.196	ENSPCOG00000005144	RAB25	94	40.196
ENSPCOG00000016461	RAB5B	82	33.333	ENSPCOG00000015977	RHEB	93	33.333
ENSPCOG00000016461	RAB5B	83	30.556	ENSPCOG00000013517	NRAS	94	30.556
ENSPCOG00000016461	RAB5B	75	44.720	ENSPCOG00000017682	RAB14	75	44.720
ENSPCOG00000016461	RAB5B	89	36.979	ENSPCOG00000012189	-	95	36.979
ENSPCOG00000016461	RAB5B	90	35.323	ENSPCOG00000002853	RAB9B	97	35.323
ENSPCOG00000016461	RAB5B	75	38.554	ENSPCOG00000028877	RAB33A	70	38.554
ENSPCOG00000016461	RAB5B	77	34.302	ENSPCOG00000008605	-	78	35.503
ENSPCOG00000016461	RAB5B	85	35.326	ENSPCOG00000019816	RAB12	77	35.106
ENSPCOG00000016461	RAB5B	78	35.882	ENSPCOG00000013225	RAB39B	80	35.882
ENSPCOG00000016461	RAB5B	82	45.198	ENSPCOG00000025845	RAB1B	87	45.198
ENSPCOG00000016461	RAB5B	62	30.986	ENSPCOG00000013027	ARL8B	73	30.986
ENSPCOG00000016461	RAB5B	80	42.222	ENSPCOG00000018906	RAB18	93	38.462
ENSPCOG00000016461	RAB5B	97	85.646	ENSPCOG00000026327	RAB5C	97	85.646
ENSPCOG00000016461	RAB5B	77	45.181	ENSPCOG00000021991	RAB6A	80	45.181
ENSPCOG00000016461	RAB5B	71	36.601	ENSPCOG00000024865	-	65	36.601
ENSPCOG00000016461	RAB5B	75	45.342	ENSPCOG00000016536	-	74	45.342
ENSPCOG00000016461	RAB5B	82	36.932	ENSPCOG00000009241	RAB15	83	36.932
ENSPCOG00000016461	RAB5B	100	81.860	ENSPCOG00000013289	RAB5A	100	81.860
ENSPCOG00000016461	RAB5B	63	48.148	ENSPCOG00000008655	-	92	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000016461	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSPCOG00000016461	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSPCOG00000016461	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSPCOG00000016461	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSPCOG00000016461	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSPCOG00000016461	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSPCOG00000016461	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSPCOG00000016461	RAB5B	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSPCOG00000016461	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSPCOG00000016461	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSPCOG00000016461	RAB5B	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSPCOG00000016461	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSPCOG00000016461	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSPCOG00000016461	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSPCOG00000016461	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSPCOG00000016461	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSPCOG00000016461	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSPCOG00000016461	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSPCOG00000016461	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSPCOG00000016461	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSPCOG00000016461	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSPCOG00000016461	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSPCOG00000016461	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSPCOG00000016461	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSPCOG00000016461	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSPCOG00000016461	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSPCOG00000016461	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSPCOG00000016461	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSPCOG00000016461	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSPCOG00000016461	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSPCOG00000016461	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSPCOG00000016461	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSPCOG00000016461	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSPCOG00000016461	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSPCOG00000016461	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSPCOG00000016461	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSPCOG00000016461	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSPCOG00000016461	RAB5B	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSPCOG00000016461	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSPCOG00000016461	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSPCOG00000016461	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSPCOG00000016461	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSPCOG00000016461	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSPCOG00000016461	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSPCOG00000016461	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSPCOG00000016461	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSPCOG00000016461	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSPCOG00000016461	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSPCOG00000016461	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSPCOG00000016461	RAB5B	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSPCOG00000016461	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSPCOG00000016461	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSPCOG00000016461	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSPCOG00000016461	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSPCOG00000016461	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes