EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000016711 (Gene tree)
Gene ID: -
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 1464 bases
Position: chrKQ028841.1:2650333-2651796
Accession: 105826183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000010481	zf-CCHC	PF00098.23	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000021061	RTL3-201	1437	XM_012664113	ENSPCOP00000010481	478 (aa)	XP_012519567	A0A2K6F918

Gene Model

Click here to download ENSPCOG00000016711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000016711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000016711	RTL3	99	72.860	ENSG00000179300	RTL3	99	72.860	Homo_sapiens
ENSPCOG00000016711	RTL3	100	69.565	ENSTSYG00000008776	RTL3	100	69.565	Carlito_syrichta
ENSPCOG00000016711	RTL3	100	58.802	ENSCGRG00001015952	Rtl3	100	57.324	Cricetulus_griseus_chok1gshd
ENSPCOG00000016711	RTL3	100	69.565	ENSDORG00000029995	Rtl3	100	69.565	Dipodomys_ordii
ENSPCOG00000016711	RTL3	100	72.200	ENSECAG00000029496	RTL3	100	72.200	Equus_caballus
ENSPCOG00000016711	RTL3	100	65.299	ENSSTOG00000027152	RTL3	100	65.299	Ictidomys_tridecemlineatus
ENSPCOG00000016711	RTL3	100	60.039	ENSJJAG00000014790	-	100	52.909	Jaculus_jaculus
ENSPCOG00000016711	RTL3	100	58.076	ENSMAUG00000011823	Rtl3	100	57.895	Mesocricetus_auratus
ENSPCOG00000016711	RTL3	100	83.162	ENSMICG00000004901	RTL3	100	83.162	Microcebus_murinus
ENSPCOG00000016711	RTL3	100	52.952	ENSMOCG00000017247	Rtl3	100	51.083	Microtus_ochrogaster
ENSPCOG00000016711	RTL3	100	57.549	MGP_CAROLIEiJ_G0033333	Rtl3	100	57.092	Mus_caroli
ENSPCOG00000016711	RTL3	100	57.371	ENSMUSG00000047686	Rtl3	100	55.714	Mus_musculus
ENSPCOG00000016711	RTL3	100	55.221	MGP_PahariEiJ_G0031869	Rtl3	100	55.496	Mus_pahari
ENSPCOG00000016711	RTL3	100	57.371	MGP_SPRETEiJ_G0034497	Rtl3	100	55.536	Mus_spretus
ENSPCOG00000016711	RTL3	100	54.371	ENSNGAG00000002851	Rtl3	100	54.371	Nannospalax_galili
ENSPCOG00000016711	RTL3	100	66.607	ENSOCUG00000025689	RTL3	100	65.187	Oryctolagus_cuniculus
ENSPCOG00000016711	RTL3	100	55.595	ENSRNOG00000002429	Rtl3	100	51.504	Rattus_norvegicus
ENSPCOG00000016711	RTL3	100	70.722	ENSTBEG00000002464	RTL3	100	70.722	Tupaia_belangeri