EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000016881 (Gene tree)
Gene ID: 105818553
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 36887 bases
Position: chrKQ024203.1:309750-346636
Accession: 105818553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000010808	PRP1_N	PF06424.12	5.1e-57	1	1
ENSPCOP00000010803	PRP1_N	PF06424.12	1.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000021389	PRPF6-202	3284	XM_012654596	ENSPCOP00000010808	941 (aa)	XP_012510050	A0A2K6FA07
ENSPCOT00000021384	PRPF6-201	2400	-	ENSPCOP00000010803	799 (aa)	-	A0A2K6FA04

Gene Model

Click here to download ENSPCOG00000016881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000016881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000016881	PRPF6	100	97.768	ENSG00000101161	PRPF6	100	97.768	Homo_sapiens
ENSPCOG00000016881	PRPF6	100	92.349	ENSAPOG00000010395	prpf6	96	92.774	Acanthochromis_polyacanthus
ENSPCOG00000016881	PRPF6	100	96.709	ENSAMEG00000001916	PRPF6	99	96.709	Ailuropoda_melanoleuca
ENSPCOG00000016881	PRPF6	100	92.030	ENSACIG00000019862	prpf6	96	92.455	Amphilophus_citrinellus
ENSPCOG00000016881	PRPF6	100	92.242	ENSAOCG00000012988	prpf6	96	92.667	Amphiprion_ocellaris
ENSPCOG00000016881	PRPF6	100	85.547	ENSAPEG00000008301	prpf6	100	86.079	Amphiprion_percula
ENSPCOG00000016881	PRPF6	100	91.711	ENSATEG00000005581	prpf6	96	92.136	Anabas_testudineus
ENSPCOG00000016881	PRPF6	100	97.237	ENSACAG00000006464	PRPF6	95	97.237	Anolis_carolinensis
ENSPCOG00000016881	PRPF6	100	97.768	ENSANAG00000012661	PRPF6	100	98.115	Aotus_nancymaae
ENSPCOG00000016881	PRPF6	100	91.923	ENSACLG00000025875	prpf6	96	92.349	Astatotilapia_calliptera
ENSPCOG00000016881	PRPF6	99	92.340	ENSAMXG00000001929	prpf6	96	92.766	Astyanax_mexicanus
ENSPCOG00000016881	PRPF6	100	97.662	ENSBTAG00000011656	PRPF6	100	97.662	Bos_taurus
ENSPCOG00000016881	PRPF6	100	97.768	ENSCJAG00000010616	PRPF6	100	97.768	Callithrix_jacchus
ENSPCOG00000016881	PRPF6	100	97.981	ENSCAFG00000013165	PRPF6	100	97.981	Canis_familiaris
ENSPCOG00000016881	PRPF6	100	97.981	ENSCAFG00020002050	PRPF6	100	97.981	Canis_lupus_dingo
ENSPCOG00000016881	PRPF6	100	97.662	ENSCHIG00000018187	PRPF6	100	97.662	Capra_hircus
ENSPCOG00000016881	PRPF6	100	98.512	ENSTSYG00000007814	PRPF6	100	98.512	Carlito_syrichta
ENSPCOG00000016881	PRPF6	97	97.056	ENSCAPG00000015077	PRPF6	100	97.056	Cavia_aperea
ENSPCOG00000016881	PRPF6	100	98.300	ENSCPOG00000007518	PRPF6	100	98.300	Cavia_porcellus
ENSPCOG00000016881	PRPF6	100	94.368	ENSCCAG00000024564	PRPF6	100	94.368	Cebus_capucinus
ENSPCOG00000016881	PRPF6	100	97.662	ENSCATG00000037473	PRPF6	100	97.662	Cercocebus_atys
ENSPCOG00000016881	PRPF6	100	94.261	ENSCLAG00000003854	PRPF6	100	94.261	Chinchilla_lanigera
ENSPCOG00000016881	PRPF6	100	92.608	ENSCSAG00000016742	PRPF6	100	92.608	Chlorocebus_sabaeus
ENSPCOG00000016881	PRPF6	85	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSPCOG00000016881	PRPF6	100	97.237	ENSCPBG00000013964	PRPF6	96	97.237	Chrysemys_picta_bellii
ENSPCOG00000016881	PRPF6	99	73.679	ENSCING00000008817	-	99	73.679	Ciona_intestinalis
ENSPCOG00000016881	PRPF6	100	97.662	ENSCANG00000038230	PRPF6	100	97.662	Colobus_angolensis_palliatus
ENSPCOG00000016881	PRPF6	100	98.406	ENSCGRG00001022666	Prpf6	100	98.406	Cricetulus_griseus_chok1gshd
ENSPCOG00000016881	PRPF6	100	86.504	ENSCSEG00000018561	prpf6	100	86.929	Cynoglossus_semilaevis
ENSPCOG00000016881	PRPF6	100	92.349	ENSCVAG00000010550	prpf6	96	92.774	Cyprinodon_variegatus
ENSPCOG00000016881	PRPF6	100	91.923	ENSDARG00000091367	prpf6	99	92.349	Danio_rerio
ENSPCOG00000016881	PRPF6	100	97.556	ENSDNOG00000040544	PRPF6	100	97.556	Dasypus_novemcinctus
ENSPCOG00000016881	PRPF6	91	97.196	ENSDORG00000005406	Prpf6	100	97.196	Dipodomys_ordii
ENSPCOG00000016881	PRPF6	99	71.905	FBgn0036828	CG6841	98	72.210	Drosophila_melanogaster
ENSPCOG00000016881	PRPF6	85	95.468	ENSETEG00000004447	PRPF6	85	95.468	Echinops_telfairi
ENSPCOG00000016881	PRPF6	99	87.063	ENSEBUG00000008835	prpf6	99	87.063	Eptatretus_burgeri
ENSPCOG00000016881	PRPF6	100	97.768	ENSEASG00005023115	PRPF6	100	97.768	Equus_asinus_asinus
ENSPCOG00000016881	PRPF6	100	93.518	ENSECAG00000013983	PRPF6	100	93.518	Equus_caballus
ENSPCOG00000016881	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSPCOG00000016881	PRPF6	100	90.755	ENSELUG00000001945	prpf6	93	90.755	Esox_lucius
ENSPCOG00000016881	PRPF6	100	97.981	ENSFCAG00000001183	PRPF6	100	97.981	Felis_catus
ENSPCOG00000016881	PRPF6	100	97.131	ENSFALG00000010326	-	97	97.131	Ficedula_albicollis
ENSPCOG00000016881	PRPF6	100	89.479	ENSFALG00000006046	-	97	89.479	Ficedula_albicollis
ENSPCOG00000016881	PRPF6	100	96.812	ENSFDAG00000006451	PRPF6	100	98.186	Fukomys_damarensis
ENSPCOG00000016881	PRPF6	100	92.880	ENSFHEG00000000560	prpf6	96	92.880	Fundulus_heteroclitus
ENSPCOG00000016881	PRPF6	100	88.584	ENSGMOG00000015622	prpf6	99	88.584	Gadus_morhua
ENSPCOG00000016881	PRPF6	100	97.131	ENSGALG00000006001	PRPF6	100	97.131	Gallus_gallus
ENSPCOG00000016881	PRPF6	100	87.566	ENSGAFG00000021109	prpf6	96	87.991	Gambusia_affinis
ENSPCOG00000016881	PRPF6	100	90.861	ENSGACG00000002576	prpf6	99	90.861	Gasterosteus_aculeatus
ENSPCOG00000016881	PRPF6	100	97.131	ENSGAGG00000008653	PRPF6	96	97.131	Gopherus_agassizii
ENSPCOG00000016881	PRPF6	100	97.768	ENSGGOG00000016876	PRPF6	100	98.814	Gorilla_gorilla
ENSPCOG00000016881	PRPF6	100	91.923	ENSHBUG00000004496	prpf6	96	92.349	Haplochromis_burtoni
ENSPCOG00000016881	PRPF6	100	98.087	ENSHGLG00000009222	PRPF6	100	98.087	Heterocephalus_glaber_female
ENSPCOG00000016881	PRPF6	97	98.037	ENSHGLG00100016600	PRPF6	100	98.037	Heterocephalus_glaber_male
ENSPCOG00000016881	PRPF6	100	90.861	ENSHCOG00000011513	prpf6	96	91.286	Hippocampus_comes
ENSPCOG00000016881	PRPF6	100	92.774	ENSIPUG00000004912	prpf6	96	92.774	Ictalurus_punctatus
ENSPCOG00000016881	PRPF6	100	95.648	ENSSTOG00000002922	PRPF6	100	95.648	Ictidomys_tridecemlineatus
ENSPCOG00000016881	PRPF6	100	98.300	ENSJJAG00000000836	Prpf6	100	98.300	Jaculus_jaculus
ENSPCOG00000016881	PRPF6	100	91.711	ENSKMAG00000017800	prpf6	96	92.136	Kryptolebias_marmoratus
ENSPCOG00000016881	PRPF6	100	91.392	ENSLBEG00000012582	prpf6	96	91.392	Labrus_bergylta
ENSPCOG00000016881	PRPF6	100	94.049	ENSLOCG00000004827	prpf6	96	93.092	Lepisosteus_oculatus
ENSPCOG00000016881	PRPF6	100	97.131	ENSLAFG00000005272	PRPF6	100	97.131	Loxodonta_africana
ENSPCOG00000016881	PRPF6	100	97.662	ENSMFAG00000037542	PRPF6	100	98.983	Macaca_fascicularis
ENSPCOG00000016881	PRPF6	100	90.977	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSPCOG00000016881	PRPF6	100	83.263	ENSMNEG00000045555	PRPF6	100	83.263	Macaca_nemestrina
ENSPCOG00000016881	PRPF6	100	92.030	ENSMAMG00000010718	prpf6	96	92.455	Mastacembelus_armatus
ENSPCOG00000016881	PRPF6	94	91.383	ENSMZEG00005026539	prpf6	100	91.837	Maylandia_zebra
ENSPCOG00000016881	PRPF6	100	91.401	ENSMZEG00005015261	-	99	91.826	Maylandia_zebra
ENSPCOG00000016881	PRPF6	97	97.056	ENSMGAG00000006634	PRPF6	100	97.056	Meleagris_gallopavo
ENSPCOG00000016881	PRPF6	100	98.512	ENSMAUG00000013969	Prpf6	100	98.512	Mesocricetus_auratus
ENSPCOG00000016881	PRPF6	87	99.757	ENSMICG00000017793	PRPF6	99	99.757	Microcebus_murinus
ENSPCOG00000016881	PRPF6	100	98.406	ENSMOCG00000001701	Prpf6	100	98.406	Microtus_ochrogaster
ENSPCOG00000016881	PRPF6	100	91.073	ENSMMOG00000020419	prpf6	100	91.498	Mola_mola
ENSPCOG00000016881	PRPF6	97	97.904	ENSMODG00000017051	PRPF6	99	97.904	Monodelphis_domestica
ENSPCOG00000016881	PRPF6	99	92.159	ENSMALG00000000089	prpf6	100	92.159	Monopterus_albus
ENSPCOG00000016881	PRPF6	100	91.923	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSPCOG00000016881	PRPF6	100	98.512	ENSMUSG00000002455	Prpf6	100	98.512	Mus_musculus
ENSPCOG00000016881	PRPF6	100	98.512	MGP_PahariEiJ_G0026262	Prpf6	100	98.512	Mus_pahari
ENSPCOG00000016881	PRPF6	100	98.512	MGP_SPRETEiJ_G0025741	Prpf6	100	98.512	Mus_spretus
ENSPCOG00000016881	PRPF6	91	97.259	ENSMPUG00000008673	PRPF6	99	98.584	Mustela_putorius_furo
ENSPCOG00000016881	PRPF6	100	98.406	ENSNGAG00000003365	Prpf6	100	98.406	Nannospalax_galili
ENSPCOG00000016881	PRPF6	100	92.030	ENSNBRG00000015025	prpf6	96	92.455	Neolamprologus_brichardi
ENSPCOG00000016881	PRPF6	100	97.662	ENSNLEG00000010208	PRPF6	100	97.662	Nomascus_leucogenys
ENSPCOG00000016881	PRPF6	100	87.977	ENSMEUG00000009824	-	90	87.977	Notamacropus_eugenii
ENSPCOG00000016881	PRPF6	100	92.683	ENSODEG00000004841	PRPF6	100	92.683	Octodon_degus
ENSPCOG00000016881	PRPF6	100	91.923	ENSONIG00000017406	prpf6	96	92.349	Oreochromis_niloticus
ENSPCOG00000016881	PRPF6	100	97.556	ENSOANG00000004920	PRPF6	100	97.556	Ornithorhynchus_anatinus
ENSPCOG00000016881	PRPF6	99	96.781	ENSOCUG00000014151	PRPF6	100	96.781	Oryctolagus_cuniculus
ENSPCOG00000016881	PRPF6	100	91.711	ENSORLG00000009592	prpf6	96	91.711	Oryzias_latipes
ENSPCOG00000016881	PRPF6	100	91.817	ENSORLG00020001458	prpf6	96	91.817	Oryzias_latipes_hni
ENSPCOG00000016881	PRPF6	100	91.817	ENSORLG00015018762	prpf6	96	91.817	Oryzias_latipes_hsok
ENSPCOG00000016881	PRPF6	100	91.711	ENSOMEG00000012174	prpf6	96	92.136	Oryzias_melastigma
ENSPCOG00000016881	PRPF6	100	91.614	ENSOGAG00000007573	PRPF6	100	91.614	Otolemur_garnettii
ENSPCOG00000016881	PRPF6	100	97.237	ENSOARG00000008776	PRPF6	99	97.237	Ovis_aries
ENSPCOG00000016881	PRPF6	100	97.768	ENSPPAG00000008686	PRPF6	100	98.814	Pan_paniscus
ENSPCOG00000016881	PRPF6	100	97.981	ENSPPRG00000008497	PRPF6	100	97.981	Panthera_pardus
ENSPCOG00000016881	PRPF6	97	97.928	ENSPTIG00000011184	PRPF6	97	97.928	Panthera_tigris_altaica
ENSPCOG00000016881	PRPF6	100	97.768	ENSPTRG00000013765	PRPF6	100	98.814	Pan_troglodytes
ENSPCOG00000016881	PRPF6	100	97.131	ENSPANG00000024135	PRPF6	100	97.131	Papio_anubis
ENSPCOG00000016881	PRPF6	100	93.624	ENSPKIG00000005627	prpf6	99	94.049	Paramormyrops_kingsleyae
ENSPCOG00000016881	PRPF6	94	97.279	ENSPSIG00000007717	PRPF6	100	97.279	Pelodiscus_sinensis
ENSPCOG00000016881	PRPF6	100	89.597	ENSPMGG00000008925	prpf6	96	89.809	Periophthalmus_magnuspinnatus
ENSPCOG00000016881	PRPF6	100	98.406	ENSPEMG00000016036	Prpf6	100	98.406	Peromyscus_maniculatus_bairdii
ENSPCOG00000016881	PRPF6	99	88.417	ENSPMAG00000006144	prpf6	99	88.417	Petromyzon_marinus
ENSPCOG00000016881	PRPF6	100	97.662	ENSPCIG00000017909	PRPF6	100	97.662	Phascolarctos_cinereus
ENSPCOG00000016881	PRPF6	100	92.455	ENSPFOG00000006431	prpf6	96	92.880	Poecilia_formosa
ENSPCOG00000016881	PRPF6	100	92.349	ENSPLAG00000005974	prpf6	96	92.774	Poecilia_latipinna
ENSPCOG00000016881	PRPF6	100	92.561	ENSPMEG00000009977	prpf6	96	92.986	Poecilia_mexicana
ENSPCOG00000016881	PRPF6	100	92.455	ENSPREG00000017993	prpf6	92	92.880	Poecilia_reticulata
ENSPCOG00000016881	PRPF6	100	97.237	ENSPPYG00000011256	PRPF6	100	97.237	Pongo_abelii
ENSPCOG00000016881	PRPF6	95	99.183	ENSPCAG00000006536	PRPF6	88	99.183	Procavia_capensis
ENSPCOG00000016881	PRPF6	100	92.242	ENSPVAG00000014316	PRPF6	100	92.242	Pteropus_vampyrus
ENSPCOG00000016881	PRPF6	100	75.478	ENSPNYG00000001939	prpf6	70	89.246	Pundamilia_nyererei
ENSPCOG00000016881	PRPF6	100	92.455	ENSPNAG00000015606	prpf6	96	92.880	Pygocentrus_nattereri
ENSPCOG00000016881	PRPF6	100	98.406	ENSRNOG00000051498	Prpf6	100	98.406	Rattus_norvegicus
ENSPCOG00000016881	PRPF6	100	97.662	ENSRBIG00000043613	PRPF6	100	98.644	Rhinopithecus_bieti
ENSPCOG00000016881	PRPF6	100	94.392	ENSRROG00000040969	PRPF6	100	98.644	Rhinopithecus_roxellana
ENSPCOG00000016881	PRPF6	91	95.221	ENSSBOG00000020632	PRPF6	97	93.344	Saimiri_boliviensis_boliviensis
ENSPCOG00000016881	PRPF6	100	97.662	ENSSHAG00000016810	PRPF6	100	97.662	Sarcophilus_harrisii
ENSPCOG00000016881	PRPF6	99	93.770	ENSSFOG00015020859	prpf6	100	94.200	Scleropages_formosus
ENSPCOG00000016881	PRPF6	100	91.392	ENSSMAG00000008112	prpf6	96	91.392	Scophthalmus_maximus
ENSPCOG00000016881	PRPF6	100	91.923	ENSSDUG00000016142	prpf6	96	92.349	Seriola_dumerili
ENSPCOG00000016881	PRPF6	100	91.923	ENSSLDG00000025283	prpf6	100	88.842	Seriola_lalandi_dorsalis
ENSPCOG00000016881	PRPF6	94	95.805	ENSSPUG00000018260	PRPF6	100	95.805	Sphenodon_punctatus
ENSPCOG00000016881	PRPF6	100	91.923	ENSSPAG00000015850	prpf6	96	92.349	Stegastes_partitus
ENSPCOG00000016881	PRPF6	100	97.450	ENSSSCG00000029119	PRPF6	100	97.279	Sus_scrofa
ENSPCOG00000016881	PRPF6	100	97.237	ENSTGUG00000007221	PRPF6	99	97.237	Taeniopygia_guttata
ENSPCOG00000016881	PRPF6	100	91.073	ENSTRUG00000002920	prpf6	96	91.498	Takifugu_rubripes
ENSPCOG00000016881	PRPF6	100	84.778	ENSTNIG00000017873	prpf6	100	85.201	Tetraodon_nigroviridis
ENSPCOG00000016881	PRPF6	89	97.238	ENSTBEG00000005348	PRPF6	85	97.238	Tupaia_belangeri
ENSPCOG00000016881	PRPF6	100	97.131	ENSTTRG00000013068	PRPF6	100	97.131	Tursiops_truncatus
ENSPCOG00000016881	PRPF6	98	96.304	ENSUMAG00000021631	PRPF6	99	99.115	Ursus_maritimus
ENSPCOG00000016881	PRPF6	100	97.981	ENSVVUG00000014948	PRPF6	100	97.981	Vulpes_vulpes
ENSPCOG00000016881	PRPF6	100	95.112	ENSXETG00000012054	prpf6	97	95.537	Xenopus_tropicalis
ENSPCOG00000016881	PRPF6	100	92.561	ENSXCOG00000008082	prpf6	96	92.986	Xiphophorus_couchianus
ENSPCOG00000016881	PRPF6	100	92.561	ENSXMAG00000015581	prpf6	96	92.986	Xiphophorus_maculatus