EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000017244 (Gene tree)
Gene ID: 105806139
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 30078 bases
Position: chrKQ017185.1:6988293-7018370
Accession: 105806139
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000011502	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSPCOP00000011486	MMR_HSR1	PF01926.23	1.7e-05	1	1
ENSPCOP00000011504	MMR_HSR1	PF01926.23	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000022088	RAB1A-202	426	-	ENSPCOP00000011499	141 (aa)	-	A0A2K6FBZ9
ENSPCOT00000022093	RAB1A-205	624	-	ENSPCOP00000011504	207 (aa)	-	A0A2K6FC06
ENSPCOT00000022091	RAB1A-204	618	-	ENSPCOP00000011502	205 (aa)	-	A0A2K6FC01
ENSPCOT00000022090	RAB1A-203	390	-	ENSPCOP00000011501	129 (aa)	-	A0A2K6FBZ1
ENSPCOT00000022095	RAB1A-207	492	-	ENSPCOP00000011506	163 (aa)	-	A0A2K6FBZ3
ENSPCOT00000022094	RAB1A-206	528	-	ENSPCOP00000011505	175 (aa)	-	A0A2K6FBZ8
ENSPCOT00000022074	RAB1A-201	1628	XM_012639201	ENSPCOP00000011486	205 (aa)	XP_012494655	A0A2K6FBX5

Gene Model

Click here to download ENSPCOG00000017244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000017244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000017244	RAB1A	83	44.000	ENSPCOG00000014314	RAB33B	76	44.000
ENSPCOG00000017244	RAB1A	84	34.463	ENSPCOG00000021838	HRAS	93	34.463
ENSPCOG00000017244	RAB1A	80	38.415	ENSPCOG00000013517	NRAS	87	38.922
ENSPCOG00000017244	RAB1A	99	44.554	ENSPCOG00000017682	RAB14	93	44.554
ENSPCOG00000017244	RAB1A	57	33.058	ENSPCOG00000021131	ARL2	61	33.058
ENSPCOG00000017244	RAB1A	57	32.203	ENSPCOG00000013027	ARL8B	61	32.203
ENSPCOG00000017244	RAB1A	88	55.249	ENSPCOG00000012189	-	90	55.249
ENSPCOG00000017244	RAB1A	82	32.544	ENSPCOG00000015977	RHEB	91	32.544
ENSPCOG00000017244	RAB1A	84	32.948	ENSPCOG00000028471	RAB23	73	32.948
ENSPCOG00000017244	RAB1A	70	52.778	ENSPCOG00000008655	-	99	52.778
ENSPCOG00000017244	RAB1A	95	38.660	ENSPCOG00000022692	RAB31	97	38.660
ENSPCOG00000017244	RAB1A	95	43.367	ENSPCOG00000016461	RAB5B	90	43.367
ENSPCOG00000017244	RAB1A	82	50.296	ENSPCOG00000019816	RAB12	69	50.296
ENSPCOG00000017244	RAB1A	76	39.623	ENSPCOG00000002853	RAB9B	79	39.623
ENSPCOG00000017244	RAB1A	94	38.384	ENSPCOG00000021991	RAB6A	94	38.384
ENSPCOG00000017244	RAB1A	69	30.872	ENSPCOG00000006201	ARL4D	73	30.872
ENSPCOG00000017244	RAB1A	75	36.774	ENSPCOG00000024865	-	65	36.774
ENSPCOG00000017244	RAB1A	57	31.092	ENSPCOG00000028187	ARL4C	58	31.092
ENSPCOG00000017244	RAB1A	99	93.069	ENSPCOG00000025845	RAB1B	100	93.069
ENSPCOG00000017244	RAB1A	100	45.581	ENSPCOG00000028053	RAB11B	98	50.279
ENSPCOG00000017244	RAB1A	77	40.373	ENSPCOG00000021648	RAB34	62	40.373
ENSPCOG00000017244	RAB1A	95	39.086	ENSPCOG00000019205	RAB22A	97	39.086
ENSPCOG00000017244	RAB1A	99	53.960	ENSPCOG00000026153	RAB35	100	53.960
ENSPCOG00000017244	RAB1A	95	43.814	ENSPCOG00000013289	RAB5A	90	43.814
ENSPCOG00000017244	RAB1A	57	34.746	ENSPCOG00000024352	ARL8A	64	34.694
ENSPCOG00000017244	RAB1A	100	46.479	ENSPCOG00000015802	-	99	46.479
ENSPCOG00000017244	RAB1A	83	41.899	ENSPCOG00000008605	-	81	42.778
ENSPCOG00000017244	RAB1A	78	30.303	ENSPCOG00000025665	DNAJC27	89	31.013
ENSPCOG00000017244	RAB1A	90	48.108	ENSPCOG00000020717	RAB2A	99	45.238
ENSPCOG00000017244	RAB1A	81	46.386	ENSPCOG00000005144	RAB25	78	46.386
ENSPCOG00000017244	RAB1A	95	45.854	ENSPCOG00000016536	-	95	45.854
ENSPCOG00000017244	RAB1A	81	50.602	ENSPCOG00000017316	RAB30	82	50.602
ENSPCOG00000017244	RAB1A	86	43.820	ENSPCOG00000013225	RAB39B	84	43.820
ENSPCOG00000017244	RAB1A	84	46.369	ENSPCOG00000028877	RAB33A	75	46.369
ENSPCOG00000017244	RAB1A	95	34.906	ENSPCOG00000027432	RAB36	68	34.906
ENSPCOG00000017244	RAB1A	95	43.590	ENSPCOG00000026327	RAB5C	89	43.590
ENSPCOG00000017244	RAB1A	80	50.909	ENSPCOG00000009241	RAB15	78	50.909
ENSPCOG00000017244	RAB1A	94	36.410	ENSPCOG00000018146	RAB6B	94	36.410
ENSPCOG00000017244	RAB1A	80	35.928	ENSPCOG00000023517	MRAS	80	35.928
ENSPCOG00000017244	RAB1A	88	46.703	ENSPCOG00000018906	RAB18	93	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000017244	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSPCOG00000017244	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSPCOG00000017244	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSPCOG00000017244	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSPCOG00000017244	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSPCOG00000017244	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSPCOG00000017244	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSPCOG00000017244	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSPCOG00000017244	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSPCOG00000017244	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSPCOG00000017244	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSPCOG00000017244	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSPCOG00000017244	RAB1A	97	99.495	ENSCHIG00000014060	RAB1A	99	97.073	Capra_hircus
ENSPCOG00000017244	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSPCOG00000017244	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSPCOG00000017244	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSPCOG00000017244	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSPCOG00000017244	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSPCOG00000017244	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSPCOG00000017244	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSPCOG00000017244	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSPCOG00000017244	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSPCOG00000017244	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSPCOG00000017244	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSPCOG00000017244	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSPCOG00000017244	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSPCOG00000017244	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSPCOG00000017244	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSPCOG00000017244	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSPCOG00000017244	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSPCOG00000017244	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSPCOG00000017244	RAB1A	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSPCOG00000017244	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSPCOG00000017244	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSPCOG00000017244	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSPCOG00000017244	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSPCOG00000017244	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSPCOG00000017244	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSPCOG00000017244	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSPCOG00000017244	RAB1A	99	98.020	ENSHGLG00100007994	RAB1A	99	98.020	Heterocephalus_glaber_male
ENSPCOG00000017244	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSPCOG00000017244	RAB1A	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSPCOG00000017244	RAB1A	99	92.647	ENSKMAG00000014038	-	97	92.647	Kryptolebias_marmoratus
ENSPCOG00000017244	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSPCOG00000017244	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSPCOG00000017244	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSPCOG00000017244	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSPCOG00000017244	RAB1A	97	99.495	ENSMMUG00000021721	RAB1A	96	96.135	Macaca_mulatta
ENSPCOG00000017244	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSPCOG00000017244	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSPCOG00000017244	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSPCOG00000017244	RAB1A	98	97.512	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSPCOG00000017244	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSPCOG00000017244	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSPCOG00000017244	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSPCOG00000017244	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSPCOG00000017244	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSPCOG00000017244	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSPCOG00000017244	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSPCOG00000017244	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSPCOG00000017244	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSPCOG00000017244	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSPCOG00000017244	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSPCOG00000017244	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSPCOG00000017244	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSPCOG00000017244	RAB1A	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSPCOG00000017244	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSPCOG00000017244	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSPCOG00000017244	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSPCOG00000017244	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSPCOG00000017244	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSPCOG00000017244	RAB1A	97	99.495	ENSOARG00000019997	RAB1A	100	97.537	Ovis_aries
ENSPCOG00000017244	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSPCOG00000017244	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSPCOG00000017244	RAB1A	97	99.495	ENSPTIG00000013471	RAB1A	100	97.059	Panthera_tigris_altaica
ENSPCOG00000017244	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSPCOG00000017244	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSPCOG00000017244	RAB1A	99	97.059	ENSPSIG00000008028	RAB1A	99	97.059	Pelodiscus_sinensis
ENSPCOG00000017244	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSPCOG00000017244	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSPCOG00000017244	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSPCOG00000017244	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSPCOG00000017244	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSPCOG00000017244	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSPCOG00000017244	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSPCOG00000017244	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSPCOG00000017244	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSPCOG00000017244	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSPCOG00000017244	RAB1A	97	99.495	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSPCOG00000017244	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSPCOG00000017244	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSPCOG00000017244	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSPCOG00000017244	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSPCOG00000017244	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSPCOG00000017244	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSPCOG00000017244	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSPCOG00000017244	RAB1A	98	98.500	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSPCOG00000017244	RAB1A	97	99.497	ENSVPAG00000005640	RAB1A	99	99.497	Vicugna_pacos
ENSPCOG00000017244	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSPCOG00000017244	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus