EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000017928 (Gene tree)
Gene ID: 105817370
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 10688 bases
Position: chrKQ023836.1:1142234-1152921
Accession: 105817370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000012667	AARP2CN	PF08142.12	8e-22	1	1
ENSPCOP00000012665	AARP2CN	PF08142.12	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000023267	TSR1-201	2635	XM_012653043	ENSPCOP00000012665	801 (aa)	XP_012508497	A0A2K6FFB6
ENSPCOT00000023269	TSR1-202	1026	-	ENSPCOP00000012667	342 (aa)	-	A0A2K6FFC9

Gene Model

Click here to download ENSPCOG00000017928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000017928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000017928	TSR1	100	90.695	ENSG00000167721	TSR1	100	91.067	Homo_sapiens
ENSPCOG00000017928	TSR1	99	55.489	ENSAPOG00000020891	tsr1	99	56.024	Acanthochromis_polyacanthus
ENSPCOG00000017928	TSR1	100	89.299	ENSAMEG00000007599	TSR1	99	88.807	Ailuropoda_melanoleuca
ENSPCOG00000017928	TSR1	99	57.054	ENSACIG00000007090	tsr1	99	57.054	Amphilophus_citrinellus
ENSPCOG00000017928	TSR1	99	55.181	ENSAOCG00000023284	tsr1	99	56.039	Amphiprion_ocellaris
ENSPCOG00000017928	TSR1	94	55.754	ENSAPEG00000008452	tsr1	100	56.667	Amphiprion_percula
ENSPCOG00000017928	TSR1	99	54.436	ENSATEG00000021961	tsr1	99	55.516	Anabas_testudineus
ENSPCOG00000017928	TSR1	90	69.452	ENSAPLG00000013422	TSR1	98	69.273	Anas_platyrhynchos
ENSPCOG00000017928	TSR1	90	54.242	ENSACAG00000000859	TSR1	94	56.427	Anolis_carolinensis
ENSPCOG00000017928	TSR1	100	91.169	ENSANAG00000031071	TSR1	100	91.294	Aotus_nancymaae
ENSPCOG00000017928	TSR1	99	55.690	ENSACLG00000007595	tsr1	99	55.394	Astatotilapia_calliptera
ENSPCOG00000017928	TSR1	99	45.355	ENSAMXG00000008470	tsr1	90	50.115	Astyanax_mexicanus
ENSPCOG00000017928	TSR1	100	91.915	ENSBTAG00000004225	TSR1	100	91.915	Bos_taurus
ENSPCOG00000017928	TSR1	97	38.840	WBGene00006497	tag-151	96	38.917	Caenorhabditis_elegans
ENSPCOG00000017928	TSR1	100	91.169	ENSCJAG00000012456	TSR1	100	91.294	Callithrix_jacchus
ENSPCOG00000017928	TSR1	100	90.672	ENSCAFG00000002106	-	100	90.672	Canis_familiaris
ENSPCOG00000017928	TSR1	99	85.794	ENSCAFG00000019273	-	100	90.396	Canis_familiaris
ENSPCOG00000017928	TSR1	100	90.299	ENSCAFG00020009728	TSR1	100	90.299	Canis_lupus_dingo
ENSPCOG00000017928	TSR1	100	92.662	ENSCHIG00000023935	TSR1	100	92.662	Capra_hircus
ENSPCOG00000017928	TSR1	100	91.294	ENSTSYG00000005468	TSR1	100	91.542	Carlito_syrichta
ENSPCOG00000017928	TSR1	99	82.682	ENSCPOG00000014833	TSR1	99	88.874	Cavia_porcellus
ENSPCOG00000017928	TSR1	99	87.430	ENSCCAG00000028962	TSR1	98	91.421	Cebus_capucinus
ENSPCOG00000017928	TSR1	100	91.191	ENSCATG00000044262	TSR1	100	91.315	Cercocebus_atys
ENSPCOG00000017928	TSR1	100	88.557	ENSCLAG00000005567	TSR1	100	88.682	Chinchilla_lanigera
ENSPCOG00000017928	TSR1	100	91.439	ENSCSAG00000013788	TSR1	100	91.563	Chlorocebus_sabaeus
ENSPCOG00000017928	TSR1	99	70.000	ENSCPBG00000020363	TSR1	97	70.421	Chrysemys_picta_bellii
ENSPCOG00000017928	TSR1	97	46.038	ENSCING00000020658	-	99	45.776	Ciona_intestinalis
ENSPCOG00000017928	TSR1	97	45.363	ENSCSAVG00000001875	-	100	44.654	Ciona_savignyi
ENSPCOG00000017928	TSR1	99	86.034	ENSCANG00000033056	TSR1	100	81.141	Colobus_angolensis_palliatus
ENSPCOG00000017928	TSR1	100	86.460	ENSCGRG00001023942	Tsr1	100	87.329	Cricetulus_griseus_chok1gshd
ENSPCOG00000017928	TSR1	100	81.149	ENSCGRG00000013015	Tsr1	100	82.772	Cricetulus_griseus_crigri
ENSPCOG00000017928	TSR1	99	55.006	ENSCSEG00000013009	tsr1	99	55.650	Cynoglossus_semilaevis
ENSPCOG00000017928	TSR1	99	55.055	ENSCVAG00000000506	tsr1	99	55.664	Cyprinodon_variegatus
ENSPCOG00000017928	TSR1	99	54.524	ENSDARG00000007744	tsr1	99	55.337	Danio_rerio
ENSPCOG00000017928	TSR1	100	90.920	ENSDNOG00000004715	TSR1	100	90.423	Dasypus_novemcinctus
ENSPCOG00000017928	TSR1	97	76.350	ENSDORG00000023234	-	100	76.350	Dipodomys_ordii
ENSPCOG00000017928	TSR1	100	87.687	ENSDORG00000016371	-	100	87.687	Dipodomys_ordii
ENSPCOG00000017928	TSR1	97	43.176	FBgn0037073	Tsr1	96	43.478	Drosophila_melanogaster
ENSPCOG00000017928	TSR1	92	91.148	ENSETEG00000017534	TSR1	91	91.148	Echinops_telfairi
ENSPCOG00000017928	TSR1	95	53.618	ENSEBUG00000013731	TSR1	97	53.359	Eptatretus_burgeri
ENSPCOG00000017928	TSR1	100	92.164	ENSEASG00005009302	TSR1	97	92.164	Equus_asinus_asinus
ENSPCOG00000017928	TSR1	100	92.164	ENSECAG00000009114	TSR1	100	92.164	Equus_caballus
ENSPCOG00000017928	TSR1	99	54.940	ENSELUG00000020984	tsr1	95	55.030	Esox_lucius
ENSPCOG00000017928	TSR1	100	91.407	ENSFCAG00000006313	TSR1	100	91.407	Felis_catus
ENSPCOG00000017928	TSR1	99	68.927	ENSFALG00000006532	TSR1	99	69.544	Ficedula_albicollis
ENSPCOG00000017928	TSR1	100	89.415	ENSFDAG00000006038	TSR1	100	89.913	Fukomys_damarensis
ENSPCOG00000017928	TSR1	99	54.940	ENSFHEG00000003626	tsr1	99	55.301	Fundulus_heteroclitus
ENSPCOG00000017928	TSR1	99	53.931	ENSGMOG00000010336	tsr1	99	54.310	Gadus_morhua
ENSPCOG00000017928	TSR1	99	55.060	ENSGAFG00000012993	tsr1	99	55.301	Gambusia_affinis
ENSPCOG00000017928	TSR1	99	55.228	ENSGACG00000010843	tsr1	99	55.720	Gasterosteus_aculeatus
ENSPCOG00000017928	TSR1	99	69.925	ENSGAGG00000025619	-	99	70.844	Gopherus_agassizii
ENSPCOG00000017928	TSR1	98	47.305	ENSGAGG00000000440	-	98	47.368	Gopherus_agassizii
ENSPCOG00000017928	TSR1	100	90.943	ENSGGOG00000001704	TSR1	100	91.315	Gorilla_gorilla
ENSPCOG00000017928	TSR1	99	55.850	ENSHBUG00000017904	tsr1	100	56.410	Haplochromis_burtoni
ENSPCOG00000017928	TSR1	97	79.306	ENSHGLG00000015688	-	99	78.535	Heterocephalus_glaber_female
ENSPCOG00000017928	TSR1	100	90.174	ENSHGLG00000012806	-	100	90.174	Heterocephalus_glaber_female
ENSPCOG00000017928	TSR1	100	90.174	ENSHGLG00100015392	TSR1	100	90.174	Heterocephalus_glaber_male
ENSPCOG00000017928	TSR1	99	56.436	ENSHCOG00000001432	tsr1	99	56.064	Hippocampus_comes
ENSPCOG00000017928	TSR1	99	55.168	ENSIPUG00000004618	tsr1	99	55.276	Ictalurus_punctatus
ENSPCOG00000017928	TSR1	100	89.565	ENSSTOG00000011819	TSR1	100	89.193	Ictidomys_tridecemlineatus
ENSPCOG00000017928	TSR1	92	81.707	ENSJJAG00000019505	Tsr1	95	81.004	Jaculus_jaculus
ENSPCOG00000017928	TSR1	99	54.248	ENSKMAG00000005763	tsr1	99	55.704	Kryptolebias_marmoratus
ENSPCOG00000017928	TSR1	99	55.489	ENSLBEG00000021823	tsr1	99	55.006	Labrus_bergylta
ENSPCOG00000017928	TSR1	99	63.882	ENSLACG00000002197	TSR1	99	63.882	Latimeria_chalumnae
ENSPCOG00000017928	TSR1	90	57.675	ENSLOCG00000006491	TSR1	97	57.824	Lepisosteus_oculatus
ENSPCOG00000017928	TSR1	77	81.979	ENSLAFG00000022396	-	97	87.986	Loxodonta_africana
ENSPCOG00000017928	TSR1	100	91.315	ENSMFAG00000021330	TSR1	100	91.439	Macaca_fascicularis
ENSPCOG00000017928	TSR1	100	91.067	ENSMMUG00000017519	TSR1	100	91.191	Macaca_mulatta
ENSPCOG00000017928	TSR1	100	90.943	ENSMNEG00000031382	TSR1	100	91.191	Macaca_nemestrina
ENSPCOG00000017928	TSR1	100	91.191	ENSMLEG00000036733	TSR1	100	91.315	Mandrillus_leucophaeus
ENSPCOG00000017928	TSR1	99	54.862	ENSMAMG00000017918	tsr1	99	54.262	Mastacembelus_armatus
ENSPCOG00000017928	TSR1	99	55.985	ENSMZEG00005007477	tsr1	99	55.327	Maylandia_zebra
ENSPCOG00000017928	TSR1	99	68.025	ENSMGAG00000005576	TSR1	99	69.051	Meleagris_gallopavo
ENSPCOG00000017928	TSR1	100	97.880	ENSMICG00000012943	TSR1	100	97.880	Microcebus_murinus
ENSPCOG00000017928	TSR1	100	85.217	ENSMOCG00000022764	Tsr1	100	86.211	Microtus_ochrogaster
ENSPCOG00000017928	TSR1	99	55.746	ENSMMOG00000014280	tsr1	99	55.825	Mola_mola
ENSPCOG00000017928	TSR1	100	78.882	ENSMODG00000010658	TSR1	100	78.358	Monodelphis_domestica
ENSPCOG00000017928	TSR1	98	56.916	ENSMALG00000011681	tsr1	98	56.548	Monopterus_albus
ENSPCOG00000017928	TSR1	100	86.070	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.945	Mus_caroli
ENSPCOG00000017928	TSR1	100	86.816	ENSMUSG00000038335	Tsr1	100	86.692	Mus_musculus
ENSPCOG00000017928	TSR1	100	86.692	MGP_PahariEiJ_G0017864	Tsr1	100	86.567	Mus_pahari
ENSPCOG00000017928	TSR1	100	86.816	MGP_SPRETEiJ_G0017570	Tsr1	100	86.692	Mus_spretus
ENSPCOG00000017928	TSR1	82	89.008	ENSMPUG00000013000	TSR1	100	89.008	Mustela_putorius_furo
ENSPCOG00000017928	TSR1	100	92.910	ENSMLUG00000003505	TSR1	100	92.910	Myotis_lucifugus
ENSPCOG00000017928	TSR1	99	82.647	ENSNGAG00000020455	-	97	79.211	Nannospalax_galili
ENSPCOG00000017928	TSR1	99	55.783	ENSNBRG00000020728	tsr1	99	55.489	Neolamprologus_brichardi
ENSPCOG00000017928	TSR1	99	86.034	ENSNLEG00000017184	TSR1	100	85.518	Nomascus_leucogenys
ENSPCOG00000017928	TSR1	99	72.864	ENSMEUG00000015828	TSR1	99	73.467	Notamacropus_eugenii
ENSPCOG00000017928	TSR1	99	55.435	ENSONIG00000013131	tsr1	99	56.151	Oreochromis_niloticus
ENSPCOG00000017928	TSR1	96	74.775	ENSOANG00000008637	TSR1	100	74.260	Ornithorhynchus_anatinus
ENSPCOG00000017928	TSR1	100	90.050	ENSOCUG00000014256	TSR1	100	90.050	Oryctolagus_cuniculus
ENSPCOG00000017928	TSR1	99	55.168	ENSORLG00000004926	tsr1	99	55.918	Oryzias_latipes
ENSPCOG00000017928	TSR1	99	54.897	ENSORLG00020008792	tsr1	99	56.106	Oryzias_latipes_hni
ENSPCOG00000017928	TSR1	99	55.048	ENSORLG00015013838	tsr1	99	55.797	Oryzias_latipes_hsok
ENSPCOG00000017928	TSR1	99	54.722	ENSOMEG00000004830	tsr1	99	56.174	Oryzias_melastigma
ENSPCOG00000017928	TSR1	100	91.739	ENSOGAG00000004492	TSR1	100	91.985	Otolemur_garnettii
ENSPCOG00000017928	TSR1	100	92.413	ENSOARG00000015437	TSR1	97	92.413	Ovis_aries
ENSPCOG00000017928	TSR1	100	90.695	ENSPPAG00000036355	TSR1	100	91.191	Pan_paniscus
ENSPCOG00000017928	TSR1	100	91.158	ENSPPRG00000015519	-	100	91.158	Panthera_pardus
ENSPCOG00000017928	TSR1	100	91.407	ENSPTIG00000010608	TSR1	100	91.407	Panthera_tigris_altaica
ENSPCOG00000017928	TSR1	100	90.695	ENSPTRG00000008547	TSR1	100	91.191	Pan_troglodytes
ENSPCOG00000017928	TSR1	100	87.841	ENSPANG00000024463	TSR1	100	87.965	Papio_anubis
ENSPCOG00000017928	TSR1	99	55.486	ENSPKIG00000013972	tsr1	99	55.112	Paramormyrops_kingsleyae
ENSPCOG00000017928	TSR1	88	68.644	ENSPSIG00000018258	TSR1	100	69.676	Pelodiscus_sinensis
ENSPCOG00000017928	TSR1	99	58.177	ENSPMGG00000011577	tsr1	98	57.980	Periophthalmus_magnuspinnatus
ENSPCOG00000017928	TSR1	100	85.697	ENSPEMG00000018033	Tsr1	100	85.821	Peromyscus_maniculatus_bairdii
ENSPCOG00000017928	TSR1	100	79.156	ENSPCIG00000009357	TSR1	98	79.852	Phascolarctos_cinereus
ENSPCOG00000017928	TSR1	92	55.339	ENSPFOG00000004483	TSR1	99	56.098	Poecilia_formosa
ENSPCOG00000017928	TSR1	99	55.185	ENSPLAG00000022320	tsr1	99	55.679	Poecilia_latipinna
ENSPCOG00000017928	TSR1	99	54.819	ENSPMEG00000004577	tsr1	99	55.181	Poecilia_mexicana
ENSPCOG00000017928	TSR1	97	54.963	ENSPREG00000010354	tsr1	95	55.514	Poecilia_reticulata
ENSPCOG00000017928	TSR1	100	82.840	ENSPPYG00000007792	TSR1	100	82.840	Pongo_abelii
ENSPCOG00000017928	TSR1	99	85.196	ENSPCAG00000012973	-	72	93.023	Procavia_capensis
ENSPCOG00000017928	TSR1	100	91.045	ENSPVAG00000002162	TSR1	100	91.294	Pteropus_vampyrus
ENSPCOG00000017928	TSR1	99	55.932	ENSPNYG00000016163	tsr1	99	55.636	Pundamilia_nyererei
ENSPCOG00000017928	TSR1	99	54.742	ENSPNAG00000008659	tsr1	99	54.958	Pygocentrus_nattereri
ENSPCOG00000017928	TSR1	100	85.590	ENSRNOG00000002980	Tsr1	100	85.714	Rattus_norvegicus
ENSPCOG00000017928	TSR1	100	90.695	ENSRBIG00000040016	TSR1	100	90.819	Rhinopithecus_bieti
ENSPCOG00000017928	TSR1	100	90.571	ENSRROG00000030361	TSR1	100	90.695	Rhinopithecus_roxellana
ENSPCOG00000017928	TSR1	96	30.532	YDL060W	-	98	30.477	Saccharomyces_cerevisiae
ENSPCOG00000017928	TSR1	100	91.169	ENSSBOG00000020785	TSR1	100	91.667	Saimiri_boliviensis_boliviensis
ENSPCOG00000017928	TSR1	100	76.952	ENSSHAG00000011394	TSR1	100	76.952	Sarcophilus_harrisii
ENSPCOG00000017928	TSR1	99	56.985	ENSSFOG00015005455	tsr1	99	57.055	Scleropages_formosus
ENSPCOG00000017928	TSR1	99	54.458	ENSSMAG00000009504	tsr1	99	55.301	Scophthalmus_maximus
ENSPCOG00000017928	TSR1	99	55.410	ENSSDUG00000012074	tsr1	99	55.114	Seriola_dumerili
ENSPCOG00000017928	TSR1	99	55.542	ENSSLDG00000002031	tsr1	99	55.247	Seriola_lalandi_dorsalis
ENSPCOG00000017928	TSR1	99	82.402	ENSSARG00000000759	TSR1	100	77.612	Sorex_araneus
ENSPCOG00000017928	TSR1	99	68.454	ENSSPUG00000007042	TSR1	98	68.657	Sphenodon_punctatus
ENSPCOG00000017928	TSR1	99	54.567	ENSSPAG00000021951	tsr1	99	55.288	Stegastes_partitus
ENSPCOG00000017928	TSR1	100	92.040	ENSSSCG00000038534	TSR1	100	92.040	Sus_scrofa
ENSPCOG00000017928	TSR1	90	71.096	ENSTGUG00000005883	TSR1	100	70.999	Taeniopygia_guttata
ENSPCOG00000017928	TSR1	99	56.585	ENSTRUG00000004665	tsr1	99	56.501	Takifugu_rubripes
ENSPCOG00000017928	TSR1	99	56.613	ENSTNIG00000016196	tsr1	99	56.242	Tetraodon_nigroviridis
ENSPCOG00000017928	TSR1	79	93.878	ENSTBEG00000015275	-	67	93.878	Tupaia_belangeri
ENSPCOG00000017928	TSR1	100	91.667	ENSTTRG00000001177	TSR1	100	91.667	Tursiops_truncatus
ENSPCOG00000017928	TSR1	100	89.415	ENSUAMG00000025160	TSR1	99	89.896	Ursus_americanus
ENSPCOG00000017928	TSR1	97	89.117	ENSUMAG00000009294	TSR1	99	89.117	Ursus_maritimus
ENSPCOG00000017928	TSR1	99	89.106	ENSVPAG00000000228	TSR1	100	87.964	Vicugna_pacos
ENSPCOG00000017928	TSR1	100	90.050	ENSVVUG00000021767	TSR1	100	90.050	Vulpes_vulpes
ENSPCOG00000017928	TSR1	99	59.926	ENSXETG00000023797	tsr1	100	60.638	Xenopus_tropicalis
ENSPCOG00000017928	TSR1	99	55.774	ENSXCOG00000009635	tsr1	99	55.814	Xiphophorus_couchianus
ENSPCOG00000017928	TSR1	99	54.699	ENSXMAG00000001397	tsr1	96	55.515	Xiphophorus_maculatus