EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000017995 (Gene tree)
Gene ID: 105819083
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 13303 bases
Position: chrKQ024502.1:1266321-1279623
Accession: 105819083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000012820	RRM_1	PF00076.22	2.9e-05	1	1
ENSPCOP00000012819	RRM_1	PF00076.22	4.1e-05	1	1
ENSPCOP00000012816	RRM_1	PF00076.22	7.1e-05	1	1
ENSPCOP00000012813	RRM_1	PF00076.22	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000023418	RDM1-202	879	XM_012655254	ENSPCOP00000012816	251 (aa)	XP_012510708	A0A2K6FFN5
ENSPCOT00000023421	RDM1-203	624	XM_012655255	ENSPCOP00000012819	166 (aa)	XP_012510709	A0A2K6FFP5
ENSPCOT00000023415	RDM1-201	978	XM_012655253	ENSPCOP00000012813	284 (aa)	XP_012510707	A0A2K6FFR3
ENSPCOT00000023422	RDM1-204	420	-	ENSPCOP00000012820	139 (aa)	-	A0A2K6FFT1

Gene Model

Click here to download ENSPCOG00000017995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000017995's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000017995	RDM1	100	87.770	ENSG00000278023	RDM1	100	87.770	Homo_sapiens
ENSPCOG00000017995	RDM1	94	43.939	ENSAPOG00000021886	zgc:103564	82	33.929	Acanthochromis_polyacanthus
ENSPCOG00000017995	RDM1	94	43.939	ENSAPEG00000008929	zgc:103564	85	34.483	Amphiprion_percula
ENSPCOG00000017995	RDM1	87	52.209	ENSAPLG00000004384	RDM1	95	52.209	Anas_platyrhynchos
ENSPCOG00000017995	RDM1	95	54.545	ENSACAG00000012989	-	100	46.786	Anolis_carolinensis
ENSPCOG00000017995	RDM1	100	84.892	ENSANAG00000032752	RDM1	100	85.075	Aotus_nancymaae
ENSPCOG00000017995	RDM1	100	81.884	ENSBTAG00000000030	RDM1	100	78.947	Bos_taurus
ENSPCOG00000017995	RDM1	100	86.331	ENSCJAG00000015031	RDM1	100	86.331	Callithrix_jacchus
ENSPCOG00000017995	RDM1	96	72.794	ENSCAFG00000015160	-	100	71.875	Canis_familiaris
ENSPCOG00000017995	RDM1	98	82.609	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSPCOG00000017995	RDM1	96	75.940	ENSCPOG00000001495	-	99	66.549	Cavia_porcellus
ENSPCOG00000017995	RDM1	100	84.892	ENSCCAG00000035763	RDM1	100	85.075	Cebus_capucinus
ENSPCOG00000017995	RDM1	100	87.770	ENSCATG00000044451	RDM1	100	87.770	Cercocebus_atys
ENSPCOG00000017995	RDM1	94	78.571	ENSCSAG00000006209	RDM1	100	78.571	Chlorocebus_sabaeus
ENSPCOG00000017995	RDM1	77	65.421	ENSCPBG00000009105	RDM1	96	53.571	Chrysemys_picta_bellii
ENSPCOG00000017995	RDM1	100	84.940	ENSCANG00000041322	RDM1	100	85.926	Colobus_angolensis_palliatus
ENSPCOG00000017995	RDM1	96	78.947	ENSCGRG00001015927	Rdm1	99	72.438	Cricetulus_griseus_chok1gshd
ENSPCOG00000017995	RDM1	94	39.098	ENSCVAG00000001956	zgc:103564	98	34.432	Cyprinodon_variegatus
ENSPCOG00000017995	RDM1	89	78.261	ENSDNOG00000045224	-	94	78.261	Dasypus_novemcinctus
ENSPCOG00000017995	RDM1	73	87.255	ENSEASG00005010554	RDM1	69	81.959	Equus_asinus_asinus
ENSPCOG00000017995	RDM1	96	88.722	ENSECAG00000022182	RDM1	91	82.745	Equus_caballus
ENSPCOG00000017995	RDM1	89	71.825	ENSEEUG00000006127	RDM1	100	71.825	Erinaceus_europaeus
ENSPCOG00000017995	RDM1	100	83.453	ENSFCAG00000043429	RDM1	100	83.453	Felis_catus
ENSPCOG00000017995	RDM1	95	62.879	ENSGALG00000000243	RDM1	97	52.708	Gallus_gallus
ENSPCOG00000017995	RDM1	73	67.327	ENSGAGG00000000293	-	78	52.209	Gopherus_agassizii
ENSPCOG00000017995	RDM1	100	87.050	ENSGGOG00000010584	RDM1	100	87.313	Gorilla_gorilla
ENSPCOG00000017995	RDM1	94	43.182	ENSHCOG00000002518	-	97	34.386	Hippocampus_comes
ENSPCOG00000017995	RDM1	100	83.333	ENSSTOG00000022491	RDM1	100	80.986	Ictidomys_tridecemlineatus
ENSPCOG00000017995	RDM1	96	86.466	ENSLAFG00000029300	RDM1	100	78.322	Loxodonta_africana
ENSPCOG00000017995	RDM1	100	87.770	ENSMFAG00000032968	RDM1	100	87.770	Macaca_fascicularis
ENSPCOG00000017995	RDM1	100	85.542	ENSMMUG00000006847	RDM1	100	86.667	Macaca_mulatta
ENSPCOG00000017995	RDM1	100	87.770	ENSMNEG00000039977	RDM1	100	87.770	Macaca_nemestrina
ENSPCOG00000017995	RDM1	100	85.542	ENSMLEG00000041158	RDM1	100	86.667	Mandrillus_leucophaeus
ENSPCOG00000017995	RDM1	82	60.526	ENSMGAG00000008774	RDM1	96	52.245	Meleagris_gallopavo
ENSPCOG00000017995	RDM1	99	74.638	ENSMAUG00000018559	Rdm1	99	71.378	Mesocricetus_auratus
ENSPCOG00000017995	RDM1	100	93.976	ENSMICG00000038651	RDM1	100	93.976	Microcebus_murinus
ENSPCOG00000017995	RDM1	95	75.758	ENSMOCG00000015095	Rdm1	99	69.565	Microtus_ochrogaster
ENSPCOG00000017995	RDM1	95	71.212	ENSMODG00000011101	RDM1	100	64.130	Monodelphis_domestica
ENSPCOG00000017995	RDM1	96	79.699	MGP_CAROLIEiJ_G0017226	Rdm1	99	71.378	Mus_caroli
ENSPCOG00000017995	RDM1	96	78.947	ENSMUSG00000010362	Rdm1	99	71.429	Mus_musculus
ENSPCOG00000017995	RDM1	96	80.451	MGP_PahariEiJ_G0018356	Rdm1	99	71.025	Mus_pahari
ENSPCOG00000017995	RDM1	96	78.195	MGP_SPRETEiJ_G0018069	Rdm1	99	71.025	Mus_spretus
ENSPCOG00000017995	RDM1	100	84.058	ENSMPUG00000008363	RDM1	100	80.070	Mustela_putorius_furo
ENSPCOG00000017995	RDM1	100	86.232	ENSNLEG00000014173	RDM1	100	87.407	Nomascus_leucogenys
ENSPCOG00000017995	RDM1	95	69.697	ENSMEUG00000015826	RDM1	100	64.143	Notamacropus_eugenii
ENSPCOG00000017995	RDM1	95	81.818	ENSOCUG00000022704	RDM1	97	77.075	Oryctolagus_cuniculus
ENSPCOG00000017995	RDM1	100	87.676	ENSOGAG00000011332	RDM1	100	87.676	Otolemur_garnettii
ENSPCOG00000017995	RDM1	100	86.232	ENSPPAG00000029969	RDM1	100	83.803	Pan_paniscus
ENSPCOG00000017995	RDM1	100	87.770	ENSPTRG00000009031	RDM1	100	88.060	Pan_troglodytes
ENSPCOG00000017995	RDM1	100	87.050	ENSPANG00000022933	RDM1	100	87.050	Papio_anubis
ENSPCOG00000017995	RDM1	96	75.940	ENSPEMG00000018985	Rdm1	98	71.119	Peromyscus_maniculatus_bairdii
ENSPCOG00000017995	RDM1	100	85.507	ENSPPYG00000008198	RDM1	100	82.746	Pongo_abelii
ENSPCOG00000017995	RDM1	96	84.962	ENSPVAG00000001116	RDM1	100	83.267	Pteropus_vampyrus
ENSPCOG00000017995	RDM1	96	79.699	ENSRNOG00000020751	Rdm1	99	71.071	Rattus_norvegicus
ENSPCOG00000017995	RDM1	100	87.770	ENSRBIG00000030000	RDM1	100	87.770	Rhinopithecus_bieti
ENSPCOG00000017995	RDM1	100	84.940	ENSRROG00000035242	RDM1	100	85.926	Rhinopithecus_roxellana
ENSPCOG00000017995	RDM1	95	73.485	ENSSHAG00000013584	RDM1	100	67.754	Sarcophilus_harrisii
ENSPCOG00000017995	RDM1	93	61.240	ENSSPUG00000010941	RDM1	91	51.190	Sphenodon_punctatus
ENSPCOG00000017995	RDM1	94	44.697	ENSSPAG00000011690	-	92	36.965	Stegastes_partitus
ENSPCOG00000017995	RDM1	82	78.070	ENSSSCG00000017574	-	94	73.451	Sus_scrofa
ENSPCOG00000017995	RDM1	81	77.358	ENSTBEG00000010030	RDM1	99	59.524	Tupaia_belangeri
ENSPCOG00000017995	RDM1	100	84.058	ENSUAMG00000027279	RDM1	100	81.338	Ursus_americanus
ENSPCOG00000017995	RDM1	100	84.058	ENSUMAG00000015423	RDM1	98	81.338	Ursus_maritimus