EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000018072 (Gene tree)
Gene ID: 105814886
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3C-like
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 623 bases
Position: chrKQ014208.1:2346-2968
Accession: 105814886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000012935	APOBEC_N	PF08210.11	2.4e-34	1	1
ENSPCOP00000012935	APOBEC_C	PF05240.14	7.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000023538	-	414	XM_012650012	ENSPCOP00000012935	132 (aa)	XP_012505466	A0A2K6FG38

Gene Model

Click here to download ENSPCOG00000018072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000018072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000018072	-	94	41.600	ENSPCOG00000016357	-	61	41.600
ENSPCOG00000018072	-	94	41.732	ENSPCOG00000003380	-	75	41.732
ENSPCOG00000018072	-	95	34.646	ENSPCOG00000026935	APOBEC2	57	34.646
ENSPCOG00000018072	-	94	69.355	ENSPCOG00000022067	-	94	69.355
ENSPCOG00000018072	-	62	44.578	ENSPCOG00000017606	-	53	44.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000018072	-	95	59.200	ENSG00000128394	APOBEC3F	67	59.200	Homo_sapiens
ENSPCOG00000018072	-	95	57.143	ENSG00000244509	APOBEC3C	66	57.143	Homo_sapiens
ENSPCOG00000018072	-	95	54.762	ENSG00000243811	APOBEC3D	66	54.762	Homo_sapiens
ENSPCOG00000018072	-	100	61.600	ENSANAG00000030088	-	66	61.600	Aotus_nancymaae
ENSPCOG00000018072	-	95	61.905	ENSCJAG00000015317	-	95	61.905	Callithrix_jacchus
ENSPCOG00000018072	-	99	44.928	ENSCAFG00020002615	-	72	44.928	Canis_lupus_dingo
ENSPCOG00000018072	-	98	56.923	ENSTSYG00000034260	-	68	56.923	Carlito_syrichta
ENSPCOG00000018072	-	94	58.400	ENSTSYG00000028254	-	67	58.400	Carlito_syrichta
ENSPCOG00000018072	-	97	53.435	ENSTSYG00000030036	-	70	53.435	Carlito_syrichta
ENSPCOG00000018072	-	95	64.286	ENSCCAG00000030932	-	57	64.286	Cebus_capucinus
ENSPCOG00000018072	-	99	56.061	ENSCATG00000043226	APOBEC3C	69	56.061	Cercocebus_atys
ENSPCOG00000018072	-	100	61.446	ENSCATG00000033502	-	68	60.800	Cercocebus_atys
ENSPCOG00000018072	-	95	60.800	ENSCSAG00000006382	APOBEC3F	68	60.800	Chlorocebus_sabaeus
ENSPCOG00000018072	-	100	54.887	ENSCSAG00000006402	APOBEC3C	69	54.887	Chlorocebus_sabaeus
ENSPCOG00000018072	-	99	54.545	ENSCANG00000039177	APOBEC3C	69	54.545	Colobus_angolensis_palliatus
ENSPCOG00000018072	-	95	59.200	ENSCANG00000033269	-	69	58.730	Colobus_angolensis_palliatus
ENSPCOG00000018072	-	100	55.200	ENSCANG00000031957	-	69	55.200	Colobus_angolensis_palliatus
ENSPCOG00000018072	-	100	60.800	ENSCANG00000032904	-	69	60.800	Colobus_angolensis_palliatus
ENSPCOG00000018072	-	94	45.968	ENSDNOG00000044642	-	58	45.968	Dasypus_novemcinctus
ENSPCOG00000018072	-	95	51.200	ENSEASG00005018641	-	61	51.200	Equus_asinus_asinus
ENSPCOG00000018072	-	100	53.061	ENSECAG00000006071	-	71	52.000	Equus_caballus
ENSPCOG00000018072	-	95	55.556	ENSGGOG00000036587	-	66	55.556	Gorilla_gorilla
ENSPCOG00000018072	-	100	60.000	ENSGGOG00000038678	APOBEC3F	69	60.000	Gorilla_gorilla
ENSPCOG00000018072	-	100	43.066	ENSHGLG00000017315	-	63	43.066	Heterocephalus_glaber_female
ENSPCOG00000018072	-	95	46.154	ENSHGLG00100003105	-	64	46.154	Heterocephalus_glaber_male
ENSPCOG00000018072	-	100	53.968	ENSMFAG00000002331	-	69	53.968	Macaca_fascicularis
ENSPCOG00000018072	-	95	59.200	ENSMFAG00000004037	APOBEC3F	67	59.200	Macaca_fascicularis
ENSPCOG00000018072	-	100	54.887	ENSMFAG00000016792	APOBEC3C	69	54.887	Macaca_fascicularis
ENSPCOG00000018072	-	100	59.200	ENSMMUG00000004017	APOBEC3F	68	59.200	Macaca_mulatta
ENSPCOG00000018072	-	100	54.135	ENSMMUG00000004018	APOBEC3C	68	54.135	Macaca_mulatta
ENSPCOG00000018072	-	100	59.200	ENSMNEG00000043316	APOBEC3D	76	59.200	Macaca_nemestrina
ENSPCOG00000018072	-	95	55.556	ENSMNEG00000045196	APOBEC3C	66	55.556	Macaca_nemestrina
ENSPCOG00000018072	-	99	56.061	ENSMLEG00000036992	APOBEC3C	69	56.061	Mandrillus_leucophaeus
ENSPCOG00000018072	-	100	60.000	ENSMLEG00000029642	APOBEC3F	69	60.000	Mandrillus_leucophaeus
ENSPCOG00000018072	-	94	60.484	ENSMICG00000042615	-	60	60.484	Microcebus_murinus
ENSPCOG00000018072	-	94	48.092	ENSMLUG00000023676	-	82	48.092	Myotis_lucifugus
ENSPCOG00000018072	-	95	49.206	ENSNLEG00000035811	-	63	49.206	Nomascus_leucogenys
ENSPCOG00000018072	-	95	53.175	ENSNLEG00000028392	APOBEC3C	66	53.175	Nomascus_leucogenys
ENSPCOG00000018072	-	99	58.400	ENSOGAG00000033404	-	70	58.400	Otolemur_garnettii
ENSPCOG00000018072	-	95	61.290	ENSOGAG00000032498	-	65	61.290	Otolemur_garnettii
ENSPCOG00000018072	-	95	56.000	ENSOGAG00000030300	-	66	56.000	Otolemur_garnettii
ENSPCOG00000018072	-	95	57.143	ENSPPAG00000014118	APOBEC3C	66	57.143	Pan_paniscus
ENSPCOG00000018072	-	95	56.349	ENSPPAG00000028218	-	78	56.349	Pan_paniscus
ENSPCOG00000018072	-	95	50.794	ENSPPRG00000003726	-	66	50.794	Panthera_pardus
ENSPCOG00000018072	-	100	58.400	ENSPTRG00000014385	APOBEC3C	69	58.400	Pan_troglodytes
ENSPCOG00000018072	-	95	56.349	ENSPTRG00000041588	APOBEC3D	66	56.349	Pan_troglodytes
ENSPCOG00000018072	-	100	61.600	ENSPANG00000010775	APOBEC3F	71	61.600	Papio_anubis
ENSPCOG00000018072	-	95	56.349	ENSPPYG00000011832	APOBEC3C	66	56.349	Pongo_abelii
ENSPCOG00000018072	-	94	48.000	ENSPVAG00000009461	-	51	48.000	Pteropus_vampyrus
ENSPCOG00000018072	-	100	60.800	ENSRBIG00000030323	-	71	60.800	Rhinopithecus_bieti
ENSPCOG00000018072	-	99	56.349	ENSRBIG00000030834	-	69	56.349	Rhinopithecus_bieti
ENSPCOG00000018072	-	95	60.000	ENSRBIG00000042297	-	79	59.524	Rhinopithecus_bieti
ENSPCOG00000018072	-	100	59.200	ENSRROG00000029045	APOBEC3C	69	59.200	Rhinopithecus_roxellana
ENSPCOG00000018072	-	95	57.143	ENSRROG00000028557	-	67	57.143	Rhinopithecus_roxellana
ENSPCOG00000018072	-	95	60.000	ENSRROG00000029996	-	68	60.000	Rhinopithecus_roxellana
ENSPCOG00000018072	-	95	62.698	ENSSBOG00000032780	-	80	62.698	Saimiri_boliviensis_boliviensis
ENSPCOG00000018072	-	97	48.062	ENSUAMG00000004433	-	71	48.062	Ursus_americanus
ENSPCOG00000018072	-	97	48.062	ENSUMAG00000014441	-	60	48.062	Ursus_maritimus
ENSPCOG00000018072	-	94	48.413	ENSVVUG00000014628	-	79	48.413	Vulpes_vulpes