EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000018564 (Gene tree)
Gene ID: 105814388
Gene Symbol: RBM23
Alias: CAPERbeta|FLJ10482|RNPC4
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 12228 bases
Position: chrKQ022624.1:635349-647576
Accession: 105814388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000013838	RRM_1	PF00076.22	3.3e-35	1	2
ENSPCOP00000013838	RRM_1	PF00076.22	3.3e-35	2	2
ENSPCOP00000013839	RRM_1	PF00076.22	3.7e-35	1	2
ENSPCOP00000013839	RRM_1	PF00076.22	3.7e-35	2	2
ENSPCOP00000013837	RRM_1	PF00076.22	3.7e-35	1	2
ENSPCOP00000013837	RRM_1	PF00076.22	3.7e-35	2	2
ENSPCOP00000013836	RRM_1	PF00076.22	4.1e-35	1	2
ENSPCOP00000013836	RRM_1	PF00076.22	4.1e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000024446	RBM23-204	804	-	ENSPCOP00000013839	267 (aa)	-	A0A2K6FIN0
ENSPCOT00000024444	RBM23-202	1290	-	ENSPCOP00000013837	429 (aa)	-	A0A2K6FIP1
ENSPCOT00000024445	RBM23-203	1236	-	ENSPCOP00000013838	411 (aa)	-	A0A2K6FIP6
ENSPCOT00000024443	RBM23-201	2478	XM_012649326	ENSPCOP00000013836	445 (aa)	XP_012504780	A0A2K6FIM9

Gene Model

Click here to download ENSPCOG00000018564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000018564's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000018564	RBM23	64	43.056	ENSPCOG00000013197	PABPC3	56	43.056
ENSPCOG00000018564	RBM23	61	35.000	ENSPCOG00000003300	ELAVL1	95	35.000
ENSPCOG00000018564	RBM23	57	36.667	ENSPCOG00000019195	-	88	36.667
ENSPCOG00000018564	RBM23	64	36.111	ENSPCOG00000024957	ELAVL4	88	36.111
ENSPCOG00000018564	RBM23	59	44.444	ENSPCOG00000026349	-	80	44.444
ENSPCOG00000018564	RBM23	66	30.864	ENSPCOG00000020234	PABPC1	53	30.675
ENSPCOG00000018564	RBM23	60	34.177	ENSPCOG00000027833	-	55	34.177
ENSPCOG00000018564	RBM23	64	36.111	ENSPCOG00000025578	PABPC4L	96	36.111
ENSPCOG00000018564	RBM23	79	30.370	ENSPCOG00000018990	TIAL1	80	30.370
ENSPCOG00000018564	RBM23	67	40.506	ENSPCOG00000023725	-	59	40.000
ENSPCOG00000018564	RBM23	64	37.500	ENSPCOG00000023781	ELAVL3	94	37.500
ENSPCOG00000018564	RBM23	64	36.111	ENSPCOG00000022819	ELAVL2	91	36.111
ENSPCOG00000018564	RBM23	60	35.443	ENSPCOG00000015986	-	57	35.443
ENSPCOG00000018564	RBM23	95	66.171	ENSPCOG00000025238	-	81	66.045
ENSPCOG00000018564	RBM23	64	41.772	ENSPCOG00000020630	PABPC1L	59	41.772
ENSPCOG00000018564	RBM23	64	37.500	ENSPCOG00000013271	TIA1	65	33.673
ENSPCOG00000018564	RBM23	57	30.864	ENSPCOG00000015793	-	57	31.034
ENSPCOG00000018564	RBM23	99	72.222	ENSPCOG00000027976	-	74	71.852
ENSPCOG00000018564	RBM23	69	44.898	ENSPCOG00000026324	HNRNPA2B1	87	44.898
ENSPCOG00000018564	RBM23	58	33.824	ENSPCOG00000021331	HNRNPD	56	33.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000018564	RBM23	100	97.026	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSPCOG00000018564	RBM23	100	95.290	ENSAMEG00000007322	RBM23	100	90.687	Ailuropoda_melanoleuca
ENSPCOG00000018564	RBM23	100	84.173	ENSACAG00000001569	RBM23	96	72.527	Anolis_carolinensis
ENSPCOG00000018564	RBM23	61	88.024	ENSANAG00000031466	-	93	86.228	Aotus_nancymaae
ENSPCOG00000018564	RBM23	100	76.404	ENSANAG00000033790	-	100	70.562	Aotus_nancymaae
ENSPCOG00000018564	RBM23	100	91.367	ENSBTAG00000038333	RBM23	100	86.825	Bos_taurus
ENSPCOG00000018564	RBM23	100	95.556	ENSCJAG00000008482	RBM23	100	86.384	Callithrix_jacchus
ENSPCOG00000018564	RBM23	100	88.889	ENSCAFG00000011217	RBM23	100	86.111	Canis_familiaris
ENSPCOG00000018564	RBM23	100	95.255	ENSCAFG00020007711	RBM23	100	91.723	Canis_lupus_dingo
ENSPCOG00000018564	RBM23	100	92.806	ENSCHIG00000025709	RBM23	100	87.041	Capra_hircus
ENSPCOG00000018564	RBM23	100	98.127	ENSTSYG00000014755	RBM23	100	98.127	Carlito_syrichta
ENSPCOG00000018564	RBM23	100	97.770	ENSCCAG00000025114	-	100	88.814	Cebus_capucinus
ENSPCOG00000018564	RBM23	100	82.090	ENSCCAG00000028584	-	100	82.022	Cebus_capucinus
ENSPCOG00000018564	RBM23	100	97.398	ENSCATG00000017832	RBM23	100	94.909	Cercocebus_atys
ENSPCOG00000018564	RBM23	100	96.679	ENSCSAG00000016213	RBM23	100	91.314	Chlorocebus_sabaeus
ENSPCOG00000018564	RBM23	52	97.857	ENSCHOG00000004460	-	51	97.468	Choloepus_hoffmanni
ENSPCOG00000018564	RBM23	100	80.882	ENSCPBG00000026096	RBM23	96	73.318	Chrysemys_picta_bellii
ENSPCOG00000018564	RBM23	100	97.407	ENSCANG00000001893	RBM23	100	90.051	Colobus_angolensis_palliatus
ENSPCOG00000018564	RBM23	100	92.279	ENSDNOG00000032457	RBM23	100	88.764	Dasypus_novemcinctus
ENSPCOG00000018564	RBM23	100	96.654	ENSDORG00000004926	-	100	96.654	Dipodomys_ordii
ENSPCOG00000018564	RBM23	52	82.143	ENSETEG00000017915	-	88	80.000	Echinops_telfairi
ENSPCOG00000018564	RBM23	100	94.872	ENSEASG00005011696	RBM23	95	91.142	Equus_asinus_asinus
ENSPCOG00000018564	RBM23	100	95.604	ENSECAG00000009910	RBM23	100	89.607	Equus_caballus
ENSPCOG00000018564	RBM23	100	89.781	ENSEEUG00000015560	RBM23	100	86.801	Erinaceus_europaeus
ENSPCOG00000018564	RBM23	100	95.255	ENSFCAG00000006632	RBM23	100	91.041	Felis_catus
ENSPCOG00000018564	RBM23	100	97.753	ENSGGOG00000015707	RBM23	100	92.457	Gorilla_gorilla
ENSPCOG00000018564	RBM23	100	84.559	ENSHGLG00100006114	RBM23	99	82.921	Heterocephalus_glaber_male
ENSPCOG00000018564	RBM23	100	97.761	ENSSTOG00000010354	RBM23	100	97.761	Ictidomys_tridecemlineatus
ENSPCOG00000018564	RBM23	100	87.956	ENSLAFG00000018567	RBM23	100	87.248	Loxodonta_africana
ENSPCOG00000018564	RBM23	100	97.048	ENSMFAG00000037595	RBM23	100	91.537	Macaca_fascicularis
ENSPCOG00000018564	RBM23	100	97.048	ENSMMUG00000018381	RBM23	100	90.869	Macaca_mulatta
ENSPCOG00000018564	RBM23	100	97.761	ENSMNEG00000042442	RBM23	100	92.152	Macaca_nemestrina
ENSPCOG00000018564	RBM23	100	90.842	ENSMLEG00000039954	RBM23	100	87.586	Mandrillus_leucophaeus
ENSPCOG00000018564	RBM23	100	98.127	ENSMICG00000006364	RBM23	100	98.127	Microcebus_murinus
ENSPCOG00000018564	RBM23	100	91.912	ENSMODG00000024448	RBM23	100	90.487	Monodelphis_domestica
ENSPCOG00000018564	RBM23	100	95.636	ENSMPUG00000007151	RBM23	100	91.071	Mustela_putorius_furo
ENSPCOG00000018564	RBM23	100	88.476	ENSMLUG00000012923	RBM23	100	79.778	Myotis_lucifugus
ENSPCOG00000018564	RBM23	100	97.059	ENSNLEG00000014792	RBM23	100	90.667	Nomascus_leucogenys
ENSPCOG00000018564	RBM23	74	97.810	ENSMEUG00000014548	-	59	97.810	Notamacropus_eugenii
ENSPCOG00000018564	RBM23	100	90.074	ENSOPRG00000001092	RBM23	100	88.539	Ochotona_princeps
ENSPCOG00000018564	RBM23	70	54.921	ENSOANG00000008908	-	100	54.422	Ornithorhynchus_anatinus
ENSPCOG00000018564	RBM23	100	93.750	ENSOCUG00000002006	RBM23	100	89.485	Oryctolagus_cuniculus
ENSPCOG00000018564	RBM23	99	90.813	ENSOGAG00000014794	RBM23	100	82.561	Otolemur_garnettii
ENSPCOG00000018564	RBM23	100	91.367	ENSOARG00000019398	RBM23	100	86.177	Ovis_aries
ENSPCOG00000018564	RBM23	100	95.956	ENSPPAG00000037922	RBM23	100	90.323	Pan_paniscus
ENSPCOG00000018564	RBM23	100	95.255	ENSPPRG00000023344	RBM23	100	90.799	Panthera_pardus
ENSPCOG00000018564	RBM23	100	95.255	ENSPTIG00000007831	RBM23	100	88.631	Panthera_tigris_altaica
ENSPCOG00000018564	RBM23	100	95.221	ENSPTRG00000006151	RBM23	100	90.000	Pan_troglodytes
ENSPCOG00000018564	RBM23	100	96.324	ENSPANG00000001324	RBM23	100	96.324	Papio_anubis
ENSPCOG00000018564	RBM23	100	91.912	ENSPCIG00000027773	RBM23	100	89.474	Phascolarctos_cinereus
ENSPCOG00000018564	RBM23	100	98.141	ENSPPYG00000005649	RBM23	100	91.415	Pongo_abelii
ENSPCOG00000018564	RBM23	92	84.064	ENSPCAG00000006669	RBM23	100	71.329	Procavia_capensis
ENSPCOG00000018564	RBM23	100	93.015	ENSPVAG00000013785	RBM23	100	88.565	Pteropus_vampyrus
ENSPCOG00000018564	RBM23	100	97.048	ENSRBIG00000039276	RBM23	100	90.423	Rhinopithecus_bieti
ENSPCOG00000018564	RBM23	100	97.048	ENSRROG00000044026	RBM23	100	90.423	Rhinopithecus_roxellana
ENSPCOG00000018564	RBM23	96	77.647	ENSSBOG00000034977	-	100	62.291	Saimiri_boliviensis_boliviensis
ENSPCOG00000018564	RBM23	100	98.592	ENSSBOG00000023037	-	100	88.571	Saimiri_boliviensis_boliviensis
ENSPCOG00000018564	RBM23	100	91.912	ENSSHAG00000012932	RBM23	100	88.377	Sarcophilus_harrisii
ENSPCOG00000018564	RBM23	100	90.580	ENSSARG00000005165	RBM23	100	88.864	Sorex_araneus
ENSPCOG00000018564	RBM23	100	81.949	ENSSPUG00000000489	RBM23	96	71.588	Sphenodon_punctatus
ENSPCOG00000018564	RBM23	100	95.588	ENSSSCG00000026700	RBM23	100	90.023	Sus_scrofa
ENSPCOG00000018564	RBM23	100	85.430	ENSTBEG00000011543	RBM23	100	85.430	Tupaia_belangeri
ENSPCOG00000018564	RBM23	100	93.015	ENSTTRG00000001500	RBM23	100	89.438	Tursiops_truncatus
ENSPCOG00000018564	RBM23	100	95.985	ENSUAMG00000008524	RBM23	100	91.723	Ursus_americanus
ENSPCOG00000018564	RBM23	100	95.985	ENSUMAG00000014075	RBM23	100	91.723	Ursus_maritimus
ENSPCOG00000018564	RBM23	52	97.857	ENSVPAG00000000599	-	58	97.159	Vicugna_pacos
ENSPCOG00000018564	RBM23	100	94.891	ENSVVUG00000019815	RBM23	100	91.946	Vulpes_vulpes
ENSPCOG00000018564	RBM23	100	77.091	ENSXETG00000022623	rbm23	100	63.575	Xenopus_tropicalis