EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000018596 (Gene tree)
Gene ID: 105805991
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 12426 bases
Position: chrKQ017074.1:1283051-1295476
Accession: 105805991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000013883	PPR	PF01535.20	4.2e-16	1	2
ENSPCOP00000013883	PPR	PF01535.20	4.2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000024490	-	2103	XM_012638991	ENSPCOP00000013883	700 (aa)	XP_012494445	A0A2K6FIU0

Gene Model

Click here to download ENSPCOG00000018596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000018596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000018596	-	99	78.917	ENSG00000106246	PTCD1	99	78.602	Homo_sapiens
ENSPCOG00000018596	-	99	78.917	ENSG00000248919	ATP5MF-PTCD1	92	78.602	Homo_sapiens
ENSPCOG00000018596	-	81	46.655	ENSAPOG00000010679	ptcd1	85	46.751	Acanthochromis_polyacanthus
ENSPCOG00000018596	-	100	80.028	ENSAMEG00000006224	-	93	79.320	Ailuropoda_melanoleuca
ENSPCOG00000018596	-	89	47.040	ENSACIG00000017861	ptcd1	91	46.677	Amphilophus_citrinellus
ENSPCOG00000018596	-	82	46.287	ENSAOCG00000022617	ptcd1	81	47.653	Amphiprion_ocellaris
ENSPCOG00000018596	-	86	47.117	ENSAOCG00000020741	-	82	47.804	Amphiprion_ocellaris
ENSPCOG00000018596	-	88	46.353	ENSAPEG00000022632	ptcd1	82	47.635	Amphiprion_percula
ENSPCOG00000018596	-	88	49.840	ENSATEG00000007016	ptcd1	85	50.081	Anabas_testudineus
ENSPCOG00000018596	-	87	59.157	ENSAPLG00000006862	-	95	58.833	Anas_platyrhynchos
ENSPCOG00000018596	-	99	55.446	ENSACAG00000012871	-	92	54.213	Anolis_carolinensis
ENSPCOG00000018596	-	98	79.710	ENSANAG00000035790	-	100	79.855	Aotus_nancymaae
ENSPCOG00000018596	-	90	47.132	ENSACLG00000002824	ptcd1	82	48.093	Astatotilapia_calliptera
ENSPCOG00000018596	-	88	46.759	ENSAMXG00000037292	ptcd1	90	46.533	Astyanax_mexicanus
ENSPCOG00000018596	-	100	80.284	ENSBTAG00000020440	-	87	80.284	Bos_taurus
ENSPCOG00000018596	-	100	80.028	ENSCJAG00000015815	-	100	80.170	Callithrix_jacchus
ENSPCOG00000018596	-	100	79.603	ENSCAFG00000015055	-	93	78.895	Canis_familiaris
ENSPCOG00000018596	-	100	79.603	ENSCAFG00020014480	-	93	78.895	Canis_lupus_dingo
ENSPCOG00000018596	-	100	79.291	ENSCHIG00000027000	-	99	79.291	Capra_hircus
ENSPCOG00000018596	-	100	83.097	ENSTSYG00000029495	-	100	83.239	Carlito_syrichta
ENSPCOG00000018596	-	93	77.508	ENSCAPG00000014660	-	100	77.508	Cavia_aperea
ENSPCOG00000018596	-	100	76.912	ENSCPOG00000001780	-	100	76.912	Cavia_porcellus
ENSPCOG00000018596	-	99	79.000	ENSCCAG00000034025	-	99	79.143	Cebus_capucinus
ENSPCOG00000018596	-	99	78.754	ENSCATG00000040859	-	99	79.630	Cercocebus_atys
ENSPCOG00000018596	-	98	79.365	ENSCLAG00000006354	-	100	78.187	Chinchilla_lanigera
ENSPCOG00000018596	-	92	78.549	ENSCSAG00000017794	-	95	78.825	Chlorocebus_sabaeus
ENSPCOG00000018596	-	97	55.556	ENSCPBG00000020866	-	97	55.007	Chrysemys_picta_bellii
ENSPCOG00000018596	-	83	30.588	ENSCING00000007717	-	91	30.165	Ciona_intestinalis
ENSPCOG00000018596	-	99	79.083	ENSCANG00000023441	-	99	79.197	Colobus_angolensis_palliatus
ENSPCOG00000018596	-	99	75.641	ENSCGRG00001023686	Ptcd1	99	75.178	Cricetulus_griseus_chok1gshd
ENSPCOG00000018596	-	99	74.964	ENSCGRG00000015031	Ptcd1	99	74.501	Cricetulus_griseus_crigri
ENSPCOG00000018596	-	87	45.366	ENSCSEG00000002378	ptcd1	83	45.380	Cynoglossus_semilaevis
ENSPCOG00000018596	-	85	46.458	ENSCVAG00000003621	ptcd1	87	46.358	Cyprinodon_variegatus
ENSPCOG00000018596	-	85	46.066	ENSCVAG00000015826	ptcd1	83	45.964	Cyprinodon_variegatus
ENSPCOG00000018596	-	87	50.242	ENSDARG00000076176	ptcd1	87	50.162	Danio_rerio
ENSPCOG00000018596	-	98	77.954	ENSDNOG00000009957	-	98	78.386	Dasypus_novemcinctus
ENSPCOG00000018596	-	98	75.942	ENSDORG00000000740	Ptcd1	99	75.942	Dipodomys_ordii
ENSPCOG00000018596	-	92	41.185	ENSEBUG00000014515	ptcd1	98	41.638	Eptatretus_burgeri
ENSPCOG00000018596	-	100	82.394	ENSEASG00005002480	-	100	82.394	Equus_asinus_asinus
ENSPCOG00000018596	-	100	82.535	ENSECAG00000016617	-	100	82.535	Equus_caballus
ENSPCOG00000018596	-	84	47.826	ENSELUG00000016517	ptcd1	82	47.496	Esox_lucius
ENSPCOG00000018596	-	100	79.320	ENSFCAG00000015069	-	100	79.320	Felis_catus
ENSPCOG00000018596	-	86	60.254	ENSFALG00000013803	-	86	60.096	Ficedula_albicollis
ENSPCOG00000018596	-	98	77.168	ENSFDAG00000006393	-	98	76.990	Fukomys_damarensis
ENSPCOG00000018596	-	75	46.082	ENSFHEG00000012491	ptcd1	89	46.082	Fundulus_heteroclitus
ENSPCOG00000018596	-	82	48.532	ENSGMOG00000007639	ptcd1	91	48.187	Gadus_morhua
ENSPCOG00000018596	-	87	58.529	ENSGALG00000004711	-	88	58.529	Gallus_gallus
ENSPCOG00000018596	-	85	48.344	ENSGAFG00000013175	ptcd1	82	48.316	Gambusia_affinis
ENSPCOG00000018596	-	88	47.536	ENSGACG00000016607	ptcd1	94	46.984	Gasterosteus_aculeatus
ENSPCOG00000018596	-	82	59.075	ENSGAGG00000021832	-	84	58.217	Gopherus_agassizii
ENSPCOG00000018596	-	99	78.775	ENSGGOG00000015123	-	99	78.459	Gorilla_gorilla
ENSPCOG00000018596	-	90	46.977	ENSHBUG00000018275	ptcd1	82	47.927	Haplochromis_burtoni
ENSPCOG00000018596	-	100	76.945	ENSHGLG00000017621	-	100	76.629	Heterocephalus_glaber_female
ENSPCOG00000018596	-	100	76.945	ENSHGLG00100007218	-	100	76.629	Heterocephalus_glaber_male
ENSPCOG00000018596	-	83	47.350	ENSHCOG00000010784	ptcd1	82	46.816	Hippocampus_comes
ENSPCOG00000018596	-	99	77.511	ENSSTOG00000001682	-	99	77.511	Ictidomys_tridecemlineatus
ENSPCOG00000018596	-	98	75.758	ENSJJAG00000000319	Ptcd1	98	75.398	Jaculus_jaculus
ENSPCOG00000018596	-	87	46.916	ENSKMAG00000008708	ptcd1	85	46.602	Kryptolebias_marmoratus
ENSPCOG00000018596	-	85	47.500	ENSLBEG00000008061	ptcd1	82	48.074	Labrus_bergylta
ENSPCOG00000018596	-	87	57.903	ENSLACG00000011172	ptcd1	83	58.609	Latimeria_chalumnae
ENSPCOG00000018596	-	93	52.555	ENSLOCG00000004833	ptcd1	99	51.398	Lepisosteus_oculatus
ENSPCOG00000018596	-	99	72.316	ENSLAFG00000002588	-	99	73.305	Loxodonta_africana
ENSPCOG00000018596	-	99	78.470	ENSMFAG00000041324	-	99	79.345	Macaca_fascicularis
ENSPCOG00000018596	-	99	78.329	ENSMMUG00000030408	-	99	79.202	Macaca_mulatta
ENSPCOG00000018596	-	99	78.470	ENSMNEG00000043786	-	99	79.345	Macaca_nemestrina
ENSPCOG00000018596	-	99	59.490	ENSMLEG00000031179	-	99	61.048	Mandrillus_leucophaeus
ENSPCOG00000018596	-	85	49.416	ENSMAMG00000007623	ptcd1	81	48.595	Mastacembelus_armatus
ENSPCOG00000018596	-	90	47.132	ENSMZEG00005012722	ptcd1	82	48.093	Maylandia_zebra
ENSPCOG00000018596	-	93	57.100	ENSMGAG00000004211	-	87	56.863	Meleagris_gallopavo
ENSPCOG00000018596	-	100	91.155	ENSMICG00000017428	-	100	91.155	Microcebus_murinus
ENSPCOG00000018596	-	91	45.370	ENSMMOG00000020243	ptcd1	96	44.717	Mola_mola
ENSPCOG00000018596	-	98	60.274	ENSMODG00000001350	-	98	59.589	Monodelphis_domestica
ENSPCOG00000018596	-	94	47.015	ENSMALG00000018442	ptcd1	88	46.418	Monopterus_albus
ENSPCOG00000018596	-	99	75.606	MGP_CAROLIEiJ_G0028011	Ptcd1	99	75.571	Mus_caroli
ENSPCOG00000018596	-	99	75.464	ENSMUSG00000029624	Ptcd1	99	75.606	Mus_musculus
ENSPCOG00000018596	-	100	75.887	MGP_PahariEiJ_G0024580	Ptcd1	100	75.852	Mus_pahari
ENSPCOG00000018596	-	99	75.606	MGP_SPRETEiJ_G0029012	Ptcd1	99	75.571	Mus_spretus
ENSPCOG00000018596	-	100	77.021	ENSMPUG00000016518	-	100	77.021	Mustela_putorius_furo
ENSPCOG00000018596	-	100	81.831	ENSMLUG00000010994	-	94	82.113	Myotis_lucifugus
ENSPCOG00000018596	-	91	47.295	ENSNBRG00000010079	ptcd1	85	48.520	Neolamprologus_brichardi
ENSPCOG00000018596	-	99	81.421	ENSNLEG00000011060	-	99	81.421	Nomascus_leucogenys
ENSPCOG00000018596	-	97	61.222	ENSMEUG00000006930	-	99	60.511	Notamacropus_eugenii
ENSPCOG00000018596	-	90	77.156	ENSOPRG00000013647	-	89	76.923	Ochotona_princeps
ENSPCOG00000018596	-	85	47.273	ENSONIG00000003168	ptcd1	97	46.952	Oreochromis_niloticus
ENSPCOG00000018596	-	80	56.460	ENSOANG00000007728	-	73	56.250	Ornithorhynchus_anatinus
ENSPCOG00000018596	-	99	75.071	ENSOCUG00000010584	-	97	75.071	Oryctolagus_cuniculus
ENSPCOG00000018596	-	88	46.560	ENSORLG00000009275	ptcd1	85	47.039	Oryzias_latipes
ENSPCOG00000018596	-	88	46.720	ENSORLG00020000988	ptcd1	85	47.204	Oryzias_latipes_hni
ENSPCOG00000018596	-	88	46.314	ENSORLG00015010557	ptcd1	85	46.787	Oryzias_latipes_hsok
ENSPCOG00000018596	-	89	46.875	ENSOMEG00000020627	ptcd1	86	47.430	Oryzias_melastigma
ENSPCOG00000018596	-	99	83.238	ENSOGAG00000010877	-	100	83.238	Otolemur_garnettii
ENSPCOG00000018596	-	100	74.929	ENSOARG00000018676	-	100	74.929	Ovis_aries
ENSPCOG00000018596	-	99	78.348	ENSPPAG00000036024	-	99	78.031	Pan_paniscus
ENSPCOG00000018596	-	100	79.716	ENSPPRG00000003478	-	100	79.716	Panthera_pardus
ENSPCOG00000018596	-	99	78.632	ENSPTRG00000019452	-	99	78.317	Pan_troglodytes
ENSPCOG00000018596	-	99	78.754	ENSPANG00000016730	-	99	79.630	Papio_anubis
ENSPCOG00000018596	-	94	49.554	ENSPKIG00000014215	ptcd1	94	49.251	Paramormyrops_kingsleyae
ENSPCOG00000018596	-	85	58.472	ENSPSIG00000011184	-	100	57.190	Pelodiscus_sinensis
ENSPCOG00000018596	-	73	42.720	ENSPMAG00000009667	ptcd1	100	42.418	Petromyzon_marinus
ENSPCOG00000018596	-	88	65.361	ENSPCIG00000024778	-	91	62.777	Phascolarctos_cinereus
ENSPCOG00000018596	-	84	47.739	ENSPFOG00000004458	ptcd1	82	47.723	Poecilia_formosa
ENSPCOG00000018596	-	85	47.682	ENSPLAG00000011051	ptcd1	82	47.892	Poecilia_latipinna
ENSPCOG00000018596	-	84	47.571	ENSPMEG00000020547	ptcd1	82	47.386	Poecilia_mexicana
ENSPCOG00000018596	-	84	47.010	ENSPREG00000000059	ptcd1	82	46.812	Poecilia_reticulata
ENSPCOG00000018596	-	93	81.011	ENSPPYG00000017377	-	98	80.521	Pongo_abelii
ENSPCOG00000018596	-	80	84.444	ENSPCAG00000001852	-	88	84.444	Procavia_capensis
ENSPCOG00000018596	-	67	85.000	ENSPVAG00000007529	-	71	85.000	Pteropus_vampyrus
ENSPCOG00000018596	-	90	46.822	ENSPNYG00000019993	ptcd1	82	47.761	Pundamilia_nyererei
ENSPCOG00000018596	-	88	50.718	ENSPNAG00000014931	ptcd1	92	49.238	Pygocentrus_nattereri
ENSPCOG00000018596	-	98	76.197	ENSRNOG00000000987	Ptcd1	98	75.617	Rattus_norvegicus
ENSPCOG00000018596	-	99	79.143	ENSRBIG00000043393	-	99	79.256	Rhinopithecus_bieti
ENSPCOG00000018596	-	99	79.000	ENSRROG00000036420	-	99	79.113	Rhinopithecus_roxellana
ENSPCOG00000018596	-	100	79.887	ENSSBOG00000024114	-	100	79.007	Saimiri_boliviensis_boliviensis
ENSPCOG00000018596	-	99	56.250	ENSSHAG00000011376	-	99	61.221	Sarcophilus_harrisii
ENSPCOG00000018596	-	87	52.724	ENSSFOG00015007909	ptcd1	83	52.818	Scleropages_formosus
ENSPCOG00000018596	-	86	46.895	ENSSMAG00000000218	ptcd1	93	47.039	Scophthalmus_maximus
ENSPCOG00000018596	-	96	45.361	ENSSDUG00000015671	ptcd1	84	48.305	Seriola_dumerili
ENSPCOG00000018596	-	86	47.222	ENSSLDG00000014261	ptcd1	84	47.039	Seriola_lalandi_dorsalis
ENSPCOG00000018596	-	98	52.510	ENSSPUG00000003540	-	84	56.804	Sphenodon_punctatus
ENSPCOG00000018596	-	90	47.096	ENSSPAG00000011049	ptcd1	85	47.059	Stegastes_partitus
ENSPCOG00000018596	-	92	82.226	ENSSSCG00000007622	-	98	82.137	Sus_scrofa
ENSPCOG00000018596	-	87	60.362	ENSTGUG00000007563	-	98	60.399	Taeniopygia_guttata
ENSPCOG00000018596	-	93	45.745	ENSTRUG00000013471	ptcd1	89	45.137	Takifugu_rubripes
ENSPCOG00000018596	-	88	47.436	ENSTNIG00000008271	ptcd1	88	46.880	Tetraodon_nigroviridis
ENSPCOG00000018596	-	99	79.291	ENSTBEG00000011021	-	99	78.865	Tupaia_belangeri
ENSPCOG00000018596	-	100	78.723	ENSTTRG00000003006	-	100	78.723	Tursiops_truncatus
ENSPCOG00000018596	-	100	79.745	ENSUAMG00000008049	-	100	79.037	Ursus_americanus
ENSPCOG00000018596	-	99	79.374	ENSVVUG00000008836	-	100	79.374	Vulpes_vulpes
ENSPCOG00000018596	-	92	51.067	ENSXETG00000009891	ptcd1	95	49.408	Xenopus_tropicalis
ENSPCOG00000018596	-	85	47.333	ENSXMAG00000015540	ptcd1	82	47.288	Xiphophorus_maculatus