EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000018710 (Gene tree)
Gene ID: 105820832
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 57261 bases
Position: chrKQ025291.1:2830426-2887686
Accession: 105820832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000014108	RRM_1	PF00076.22	2.9e-09	1	1
ENSPCOP00000014112	RRM_1	PF00076.22	3.2e-09	1	1
ENSPCOP00000014111	RRM_1	PF00076.22	3.3e-09	1	1
ENSPCOP00000014110	RRM_1	PF00076.22	3.3e-09	1	1
ENSPCOP00000014106	RRM_1	PF00076.22	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000024713	SCAF4-201	4232	XM_012657397	ENSPCOP00000014106	1150 (aa)	XP_012512851	A0A2K6FJD6
ENSPCOT00000024718	SCAF4-204	3369	-	ENSPCOP00000014111	1122 (aa)	-	A0A2K6FJE0
ENSPCOT00000024719	SCAF4-205	3267	-	ENSPCOP00000014112	1088 (aa)	-	A0A2K6FJF2
ENSPCOT00000024717	SCAF4-203	3387	-	ENSPCOP00000014110	1128 (aa)	-	A0A2K6FJF6
ENSPCOT00000024715	SCAF4-202	3408	-	ENSPCOP00000014108	1135 (aa)	-	A0A2K6FJG8

Gene Model

Click here to download ENSPCOG00000018710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000018710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000018710	SCAF4	100	96.177	ENSG00000156304	SCAF4	100	95.917	Homo_sapiens
ENSPCOG00000018710	SCAF4	64	60.456	ENSAPOG00000019615	scaf4b	53	72.152	Acanthochromis_polyacanthus
ENSPCOG00000018710	SCAF4	78	54.412	ENSAPOG00000002946	scaf4a	55	58.485	Acanthochromis_polyacanthus
ENSPCOG00000018710	SCAF4	74	93.366	ENSAMEG00000014987	SCAF4	96	93.413	Ailuropoda_melanoleuca
ENSPCOG00000018710	SCAF4	58	60.076	ENSAOCG00000010433	scaf4b	55	73.418	Amphiprion_ocellaris
ENSPCOG00000018710	SCAF4	69	56.283	ENSAOCG00000000615	scaf4a	55	58.333	Amphiprion_ocellaris
ENSPCOG00000018710	SCAF4	69	56.283	ENSAPEG00000021229	scaf4a	55	58.182	Amphiprion_percula
ENSPCOG00000018710	SCAF4	58	58.364	ENSAPEG00000010913	scaf4b	55	73.418	Amphiprion_percula
ENSPCOG00000018710	SCAF4	53	60.759	ENSATEG00000011758	scaf4b	54	72.222	Anabas_testudineus
ENSPCOG00000018710	SCAF4	99	75.862	ENSAPLG00000002509	SCAF4	99	73.050	Anas_platyrhynchos
ENSPCOG00000018710	SCAF4	95	70.163	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSPCOG00000018710	SCAF4	100	95.917	ENSANAG00000037494	SCAF4	100	95.482	Aotus_nancymaae
ENSPCOG00000018710	SCAF4	53	61.303	ENSACLG00000024833	scaf4b	55	74.051	Astatotilapia_calliptera
ENSPCOG00000018710	SCAF4	92	51.754	ENSAMXG00000008585	scaf4a	59	64.353	Astyanax_mexicanus
ENSPCOG00000018710	SCAF4	100	92.274	ENSBTAG00000018855	SCAF4	100	92.014	Bos_taurus
ENSPCOG00000018710	SCAF4	100	95.222	ENSCJAG00000008993	SCAF4	99	96.882	Callithrix_jacchus
ENSPCOG00000018710	SCAF4	99	94.396	ENSCAFG00000008863	SCAF4	99	94.396	Canis_familiaris
ENSPCOG00000018710	SCAF4	99	91.285	ENSCAFG00020026019	SCAF4	100	93.811	Canis_lupus_dingo
ENSPCOG00000018710	SCAF4	100	91.522	ENSCHIG00000008385	SCAF4	100	91.522	Capra_hircus
ENSPCOG00000018710	SCAF4	91	97.120	ENSTSYG00000011344	SCAF4	99	97.120	Carlito_syrichta
ENSPCOG00000018710	SCAF4	100	89.905	ENSCPOG00000012443	SCAF4	100	90.078	Cavia_porcellus
ENSPCOG00000018710	SCAF4	100	94.440	ENSCCAG00000033727	SCAF4	100	95.135	Cebus_capucinus
ENSPCOG00000018710	SCAF4	100	95.833	ENSCATG00000030379	SCAF4	100	95.920	Cercocebus_atys
ENSPCOG00000018710	SCAF4	99	91.138	ENSCLAG00000006298	SCAF4	100	92.094	Chinchilla_lanigera
ENSPCOG00000018710	SCAF4	100	94.878	ENSCSAG00000009438	SCAF4	100	95.139	Chlorocebus_sabaeus
ENSPCOG00000018710	SCAF4	100	95.917	ENSCANG00000029847	SCAF4	100	95.830	Colobus_angolensis_palliatus
ENSPCOG00000018710	SCAF4	99	81.916	ENSCGRG00001020821	Scaf4	69	86.402	Cricetulus_griseus_chok1gshd
ENSPCOG00000018710	SCAF4	74	86.320	ENSCGRG00000014360	Scaf4	69	86.441	Cricetulus_griseus_crigri
ENSPCOG00000018710	SCAF4	79	52.340	ENSCSEG00000019549	scaf4a	69	50.120	Cynoglossus_semilaevis
ENSPCOG00000018710	SCAF4	75	45.275	ENSCSEG00000012808	-	55	68.354	Cynoglossus_semilaevis
ENSPCOG00000018710	SCAF4	100	89.913	ENSDNOG00000019014	SCAF4	94	90.696	Dasypus_novemcinctus
ENSPCOG00000018710	SCAF4	92	97.436	ENSETEG00000000583	SCAF4	94	97.436	Echinops_telfairi
ENSPCOG00000018710	SCAF4	100	93.565	ENSEASG00005007756	SCAF4	100	93.565	Equus_asinus_asinus
ENSPCOG00000018710	SCAF4	100	93.565	ENSECAG00000014248	SCAF4	100	93.565	Equus_caballus
ENSPCOG00000018710	SCAF4	58	52.862	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSPCOG00000018710	SCAF4	100	92.468	ENSFCAG00000002228	SCAF4	100	92.987	Felis_catus
ENSPCOG00000018710	SCAF4	99	89.166	ENSFDAG00000017780	SCAF4	100	89.252	Fukomys_damarensis
ENSPCOG00000018710	SCAF4	59	56.981	ENSFHEG00000007634	scaf4b	55	71.519	Fundulus_heteroclitus
ENSPCOG00000018710	SCAF4	99	77.471	ENSGALG00000033965	SCAF4	99	74.291	Gallus_gallus
ENSPCOG00000018710	SCAF4	69	55.102	ENSGACG00000020580	scaf4a	54	70.122	Gasterosteus_aculeatus
ENSPCOG00000018710	SCAF4	91	94.215	ENSGGOG00000015557	SCAF4	100	97.561	Gorilla_gorilla
ENSPCOG00000018710	SCAF4	100	90.464	ENSHGLG00000010582	SCAF4	100	91.237	Heterocephalus_glaber_female
ENSPCOG00000018710	SCAF4	99	90.348	ENSHGLG00100009441	SCAF4	100	91.130	Heterocephalus_glaber_male
ENSPCOG00000018710	SCAF4	69	51.039	ENSIPUG00000011285	scaf4	62	64.420	Ictalurus_punctatus
ENSPCOG00000018710	SCAF4	99	87.134	ENSSTOG00000004450	SCAF4	100	87.933	Ictidomys_tridecemlineatus
ENSPCOG00000018710	SCAF4	99	89.367	ENSJJAG00000019447	Scaf4	99	89.543	Jaculus_jaculus
ENSPCOG00000018710	SCAF4	61	57.971	ENSKMAG00000005742	scaf4b	54	73.885	Kryptolebias_marmoratus
ENSPCOG00000018710	SCAF4	97	61.552	ENSLACG00000013913	SCAF4	59	69.558	Latimeria_chalumnae
ENSPCOG00000018710	SCAF4	95	58.140	ENSLOCG00000009162	scaf4a	99	55.113	Lepisosteus_oculatus
ENSPCOG00000018710	SCAF4	99	93.597	ENSLAFG00000010710	SCAF4	100	91.703	Loxodonta_africana
ENSPCOG00000018710	SCAF4	100	95.671	ENSMFAG00000037668	SCAF4	100	95.931	Macaca_fascicularis
ENSPCOG00000018710	SCAF4	100	95.584	ENSMMUG00000001712	SCAF4	100	95.844	Macaca_mulatta
ENSPCOG00000018710	SCAF4	100	95.415	ENSMNEG00000032966	SCAF4	100	95.675	Macaca_nemestrina
ENSPCOG00000018710	SCAF4	99	95.451	ENSMLEG00000039674	SCAF4	100	95.626	Mandrillus_leucophaeus
ENSPCOG00000018710	SCAF4	99	76.304	ENSMGAG00000014515	SCAF4	99	74.202	Meleagris_gallopavo
ENSPCOG00000018710	SCAF4	99	88.313	ENSMAUG00000013307	Scaf4	100	88.163	Mesocricetus_auratus
ENSPCOG00000018710	SCAF4	100	97.565	ENSMICG00000005256	SCAF4	100	97.565	Microcebus_murinus
ENSPCOG00000018710	SCAF4	100	85.998	ENSMOCG00000012087	Scaf4	99	87.726	Microtus_ochrogaster
ENSPCOG00000018710	SCAF4	99	85.880	ENSMODG00000021040	SCAF4	99	85.076	Monodelphis_domestica
ENSPCOG00000018710	SCAF4	100	83.592	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.429	Mus_caroli
ENSPCOG00000018710	SCAF4	100	83.102	ENSMUSG00000022983	Scaf4	100	85.861	Mus_musculus
ENSPCOG00000018710	SCAF4	100	82.535	MGP_PahariEiJ_G0016649	Scaf4	100	85.604	Mus_pahari
ENSPCOG00000018710	SCAF4	100	83.852	MGP_SPRETEiJ_G0021850	Scaf4	100	86.260	Mus_spretus
ENSPCOG00000018710	SCAF4	100	92.208	ENSMPUG00000001078	SCAF4	100	91.948	Mustela_putorius_furo
ENSPCOG00000018710	SCAF4	99	76.846	ENSMLUG00000011472	SCAF4	79	82.972	Myotis_lucifugus
ENSPCOG00000018710	SCAF4	99	90.901	ENSNGAG00000005214	Scaf4	99	91.012	Nannospalax_galili
ENSPCOG00000018710	SCAF4	100	95.917	ENSNLEG00000003569	SCAF4	100	95.830	Nomascus_leucogenys
ENSPCOG00000018710	SCAF4	84	95.139	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSPCOG00000018710	SCAF4	100	88.917	ENSODEG00000002718	SCAF4	100	89.003	Octodon_degus
ENSPCOG00000018710	SCAF4	100	89.524	ENSOCUG00000008336	SCAF4	100	89.437	Oryctolagus_cuniculus
ENSPCOG00000018710	SCAF4	99	94.081	ENSOGAG00000014653	SCAF4	94	95.358	Otolemur_garnettii
ENSPCOG00000018710	SCAF4	99	90.925	ENSOARG00000013894	SCAF4	99	90.381	Ovis_aries
ENSPCOG00000018710	SCAF4	100	96.177	ENSPPAG00000028535	SCAF4	100	95.917	Pan_paniscus
ENSPCOG00000018710	SCAF4	99	92.563	ENSPPRG00000000635	SCAF4	100	93.176	Panthera_pardus
ENSPCOG00000018710	SCAF4	99	91.273	ENSPTIG00000021578	SCAF4	100	89.279	Panthera_tigris_altaica
ENSPCOG00000018710	SCAF4	100	96.177	ENSPTRG00000013848	SCAF4	100	95.917	Pan_troglodytes
ENSPCOG00000018710	SCAF4	100	95.411	ENSPANG00000017332	SCAF4	100	95.671	Papio_anubis
ENSPCOG00000018710	SCAF4	65	64.706	ENSPKIG00000022408	scaf4a	90	65.425	Paramormyrops_kingsleyae
ENSPCOG00000018710	SCAF4	99	78.094	ENSPSIG00000014242	SCAF4	97	75.201	Pelodiscus_sinensis
ENSPCOG00000018710	SCAF4	64	60.377	ENSPMGG00000016741	scaf4a	53	60.674	Periophthalmus_magnuspinnatus
ENSPCOG00000018710	SCAF4	99	83.532	ENSPCIG00000028183	SCAF4	91	83.318	Phascolarctos_cinereus
ENSPCOG00000018710	SCAF4	59	55.056	ENSPLAG00000004403	-	52	71.338	Poecilia_latipinna
ENSPCOG00000018710	SCAF4	59	55.431	ENSPMEG00000006666	-	54	71.975	Poecilia_mexicana
ENSPCOG00000018710	SCAF4	100	96.264	ENSPPYG00000011355	SCAF4	100	96.264	Pongo_abelii
ENSPCOG00000018710	SCAF4	94	92.963	ENSPCAG00000009998	SCAF4	92	92.963	Procavia_capensis
ENSPCOG00000018710	SCAF4	100	92.609	ENSPVAG00000005220	SCAF4	100	92.696	Pteropus_vampyrus
ENSPCOG00000018710	SCAF4	53	60.536	ENSPNYG00000010526	scaf4b	55	74.051	Pundamilia_nyererei
ENSPCOG00000018710	SCAF4	76	58.043	ENSPNAG00000016892	scaf4a	59	65.469	Pygocentrus_nattereri
ENSPCOG00000018710	SCAF4	98	85.561	ENSRNOG00000002104	Scaf4	99	85.604	Rattus_norvegicus
ENSPCOG00000018710	SCAF4	99	94.370	ENSRBIG00000040007	SCAF4	99	90.088	Rhinopithecus_bieti
ENSPCOG00000018710	SCAF4	100	96.177	ENSRROG00000029488	SCAF4	100	96.177	Rhinopithecus_roxellana
ENSPCOG00000018710	SCAF4	99	86.034	ENSSHAG00000001581	SCAF4	99	84.870	Sarcophilus_harrisii
ENSPCOG00000018710	SCAF4	87	47.619	ENSSFOG00015006338	scaf4a	99	46.763	Scleropages_formosus
ENSPCOG00000018710	SCAF4	66	58.303	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSPCOG00000018710	SCAF4	57	61.071	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSPCOG00000018710	SCAF4	52	60.000	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSPCOG00000018710	SCAF4	100	90.295	ENSSARG00000009994	SCAF4	100	88.995	Sorex_araneus
ENSPCOG00000018710	SCAF4	100	90.768	ENSSSCG00000021023	SCAF4	100	90.768	Sus_scrofa
ENSPCOG00000018710	SCAF4	74	72.354	ENSTGUG00000013464	SCAF4	95	76.567	Taeniopygia_guttata
ENSPCOG00000018710	SCAF4	50	59.854	ENSTRUG00000009536	-	65	57.664	Takifugu_rubripes
ENSPCOG00000018710	SCAF4	99	92.193	ENSTTRG00000010963	SCAF4	100	92.281	Tursiops_truncatus
ENSPCOG00000018710	SCAF4	100	91.217	ENSUAMG00000008860	SCAF4	100	91.391	Ursus_americanus
ENSPCOG00000018710	SCAF4	99	92.896	ENSUMAG00000016962	SCAF4	100	92.986	Ursus_maritimus
ENSPCOG00000018710	SCAF4	99	94.459	ENSVVUG00000002953	SCAF4	100	94.459	Vulpes_vulpes
ENSPCOG00000018710	SCAF4	99	56.442	ENSXETG00000007351	scaf4	63	66.476	Xenopus_tropicalis