EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000018751 (Gene tree)
Gene ID: 105817808
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 11912 bases
Position: chrKQ024014.1:1237125-1249036
Accession: 105817808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	1	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	2	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	3	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	4	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	5	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	6	7
ENSPCOP00000014156	zf-C2H2	PF00096.26	3.4e-39	7	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	1	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	2	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	3	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	4	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	5	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	6	7
ENSPCOP00000014155	zf-C2H2	PF00096.26	8.7e-39	7	7
ENSPCOP00000014156	zf-met	PF12874.7	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000024763	ZNF550-202	1143	-	ENSPCOP00000014156	380 (aa)	-	A0A2K6FJJ2
ENSPCOT00000024762	ZNF550-201	1806	XM_012653602	ENSPCOP00000014155	421 (aa)	XP_012509056	A0A2K6FJK5

Gene Model

Click here to download ENSPCOG00000018751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000018751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000018751	ZNF550	100	41.124	ENSPCOG00000018796	ZNF205	75	40.449
ENSPCOG00000018751	ZNF550	57	35.678	ENSPCOG00000016742	GTF3A	62	35.678
ENSPCOG00000018751	ZNF550	60	54.745	ENSPCOG00000022216	ZNF768	52	54.286
ENSPCOG00000018751	ZNF550	63	44.048	ENSPCOG00000015656	SNAI2	52	44.048
ENSPCOG00000018751	ZNF550	72	32.857	ENSPCOG00000025157	ZNF784	65	32.857
ENSPCOG00000018751	ZNF550	99	54.185	ENSPCOG00000022996	ZNF235	99	54.185
ENSPCOG00000018751	ZNF550	62	43.697	ENSPCOG00000017919	ZFP64	69	43.697
ENSPCOG00000018751	ZNF550	72	38.679	ENSPCOG00000026282	ZNF574	66	37.885
ENSPCOG00000018751	ZNF550	99	56.388	ENSPCOG00000020501	ZNF226	99	56.388
ENSPCOG00000018751	ZNF550	99	51.542	ENSPCOG00000022329	ZNF555	94	51.759
ENSPCOG00000018751	ZNF550	60	51.309	ENSPCOG00000026399	ZNF628	58	51.309
ENSPCOG00000018751	ZNF550	64	38.272	ENSPCOG00000013159	ZNF423	56	38.272
ENSPCOG00000018751	ZNF550	66	33.758	ENSPCOG00000014939	ZNF770	81	33.758
ENSPCOG00000018751	ZNF550	100	58.590	ENSPCOG00000018336	ZNF551	98	58.590
ENSPCOG00000018751	ZNF550	99	49.333	ENSPCOG00000017287	ZNF317	90	48.333
ENSPCOG00000018751	ZNF550	61	45.128	ENSPCOG00000007667	ZNF319	85	45.128
ENSPCOG00000018751	ZNF550	77	55.251	ENSPCOG00000023041	ZFP1	86	55.251
ENSPCOG00000018751	ZNF550	99	60.526	ENSPCOG00000014863	ZNF582	93	60.526
ENSPCOG00000018751	ZNF550	73	40.426	ENSPCOG00000022828	PRDM5	73	40.426
ENSPCOG00000018751	ZNF550	99	54.500	ENSPCOG00000024437	-	99	55.455
ENSPCOG00000018751	ZNF550	99	48.966	ENSPCOG00000025734	-	100	50.249
ENSPCOG00000018751	ZNF550	100	55.066	ENSPCOG00000019656	ZNF81	98	55.066
ENSPCOG00000018751	ZNF550	67	54.091	ENSPCOG00000014758	-	92	54.091
ENSPCOG00000018751	ZNF550	99	40.088	ENSPCOG00000003477	ZNF425	99	40.088
ENSPCOG00000018751	ZNF550	100	53.571	ENSPCOG00000021930	ZNF2	99	53.571
ENSPCOG00000018751	ZNF550	68	45.455	ENSPCOG00000003371	ZNF236	60	45.455
ENSPCOG00000018751	ZNF550	99	55.507	ENSPCOG00000022725	ZNF112	99	55.507
ENSPCOG00000018751	ZNF550	59	42.353	ENSPCOG00000022370	MAZ	59	36.585
ENSPCOG00000018751	ZNF550	97	52.294	ENSPCOG00000015292	ZNF233	99	52.830
ENSPCOG00000018751	ZNF550	99	54.626	ENSPCOG00000015720	ZNF791	99	54.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000018751	ZNF550	100	87.173	ENSG00000251369	ZNF550	100	87.173	Homo_sapiens
ENSPCOG00000018751	ZNF550	100	85.343	ENSCATG00000020915	ZNF550	100	85.343	Cercocebus_atys
ENSPCOG00000018751	ZNF550	100	65.013	ENSCLAG00000000250	ZNF550	95	70.321	Chinchilla_lanigera
ENSPCOG00000018751	ZNF550	98	85.024	ENSCSAG00000001629	ZNF550	100	85.024	Chlorocebus_sabaeus
ENSPCOG00000018751	ZNF550	100	85.079	ENSCANG00000033735	ZNF550	100	85.079	Colobus_angolensis_palliatus
ENSPCOG00000018751	ZNF550	89	71.976	ENSDNOG00000033330	-	99	71.831	Dasypus_novemcinctus
ENSPCOG00000018751	ZNF550	99	70.449	ENSFCAG00000034766	ZNF550	99	70.449	Felis_catus
ENSPCOG00000018751	ZNF550	100	86.911	ENSGGOG00000014068	ZNF550	100	86.911	Gorilla_gorilla
ENSPCOG00000018751	ZNF550	100	72.577	ENSHGLG00000018048	ZNF550	100	72.577	Heterocephalus_glaber_female
ENSPCOG00000018751	ZNF550	100	85.343	ENSMFAG00000036005	ZNF550	100	85.343	Macaca_fascicularis
ENSPCOG00000018751	ZNF550	100	85.079	ENSMMUG00000006122	ZNF550	100	85.079	Macaca_mulatta
ENSPCOG00000018751	ZNF550	100	85.343	ENSMNEG00000041366	ZNF550	100	85.343	Macaca_nemestrina
ENSPCOG00000018751	ZNF550	100	85.106	ENSMLEG00000034688	ZNF550	100	85.106	Mandrillus_leucophaeus
ENSPCOG00000018751	ZNF550	100	94.737	ENSMICG00000007561	ZNF550	100	94.737	Microcebus_murinus
ENSPCOG00000018751	ZNF550	99	69.921	ENSPPRG00000013475	ZNF550	99	69.921	Panthera_pardus
ENSPCOG00000018751	ZNF550	100	69.000	ENSPTIG00000018007	ZNF550	80	68.976	Panthera_tigris_altaica
ENSPCOG00000018751	ZNF550	100	86.911	ENSPTRG00000011560	ZNF550	100	86.911	Pan_troglodytes
ENSPCOG00000018751	ZNF550	100	85.340	ENSPANG00000030602	ZNF550	100	85.340	Papio_anubis
ENSPCOG00000018751	ZNF550	99	71.667	ENSPVAG00000000908	ZNF550	100	71.667	Pteropus_vampyrus
ENSPCOG00000018751	ZNF550	100	85.864	ENSRBIG00000017275	ZNF550	100	85.864	Rhinopithecus_bieti
ENSPCOG00000018751	ZNF550	100	85.864	ENSRROG00000040063	ZNF550	100	85.864	Rhinopithecus_roxellana
ENSPCOG00000018751	ZNF550	98	79.612	ENSTTRG00000000293	ZNF550	100	79.612	Tursiops_truncatus