EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000019292 (Gene tree)
Gene ID: 105812983
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 146051 bases
Position: chrKQ022291.1:11149442-11295492
Accession: 105812983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000015153	R3H	PF01424.22	4.3e-05	1	1
ENSPCOP00000015152	R3H	PF01424.22	4.8e-05	1	1
ENSPCOP00000015154	RNA_bind	PF08675.11	1.2e-33	1	1
ENSPCOP00000015153	RNA_bind	PF08675.11	1.7e-33	1	1
ENSPCOP00000015152	RNA_bind	PF08675.11	1.8e-33	1	1
ENSPCOP00000015152	CAF1	PF04857.20	2.3e-79	1	1
ENSPCOP00000015153	CAF1	PF04857.20	1.6e-57	1	2
ENSPCOP00000015153	CAF1	PF04857.20	1.6e-57	2	2
ENSPCOP00000015154	CAF1	PF04857.20	4e-42	1	2
ENSPCOP00000015154	CAF1	PF04857.20	4e-42	2	2
ENSPCOP00000015155	CAF1	PF04857.20	8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000025768	PARN-204	198	-	ENSPCOP00000015155	65 (aa)	-	A0A2K6FME0
ENSPCOT00000025765	PARN-201	1872	XM_012647546	ENSPCOP00000015152	623 (aa)	XP_012503000	A0A2K6FMF6
ENSPCOT00000025766	PARN-202	1734	-	ENSPCOP00000015153	577 (aa)	-	A0A2K6FME8
ENSPCOT00000025767	PARN-203	1347	-	ENSPCOP00000015154	448 (aa)	-	A0A2K6FMD8

Gene Model

Click here to download ENSPCOG00000019292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000019292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000019292	PARN	100	98.462	ENSG00000140694	PARN	100	98.462	Homo_sapiens
ENSPCOG00000019292	PARN	92	78.333	ENSAPOG00000019730	-	100	67.873	Acanthochromis_polyacanthus
ENSPCOG00000019292	PARN	100	98.305	ENSAMEG00000011208	PARN	100	91.236	Ailuropoda_melanoleuca
ENSPCOG00000019292	PARN	92	76.667	ENSACIG00000000619	parn	85	72.161	Amphilophus_citrinellus
ENSPCOG00000019292	PARN	91	76.271	ENSAOCG00000003465	parn	83	70.598	Amphiprion_ocellaris
ENSPCOG00000019292	PARN	75	73.156	ENSAPEG00000010661	parn	93	73.156	Amphiprion_percula
ENSPCOG00000019292	PARN	94	74.576	ENSATEG00000004661	parn	83	71.918	Anabas_testudineus
ENSPCOG00000019292	PARN	99	81.517	ENSAPLG00000013914	PARN	99	81.517	Anas_platyrhynchos
ENSPCOG00000019292	PARN	100	88.136	ENSACAG00000004973	PARN	100	76.876	Anolis_carolinensis
ENSPCOG00000019292	PARN	100	98.462	ENSANAG00000031516	PARN	100	98.462	Aotus_nancymaae
ENSPCOG00000019292	PARN	98	76.271	ENSACLG00000004742	parn	84	71.870	Astatotilapia_calliptera
ENSPCOG00000019292	PARN	91	77.966	ENSAMXG00000012390	parn	92	69.565	Astyanax_mexicanus
ENSPCOG00000019292	PARN	100	100.000	ENSBTAG00000018097	PARN	100	90.641	Bos_taurus
ENSPCOG00000019292	PARN	100	98.462	ENSCJAG00000015866	PARN	100	98.462	Callithrix_jacchus
ENSPCOG00000019292	PARN	100	96.610	ENSCAFG00000018795	PARN	100	91.850	Canis_familiaris
ENSPCOG00000019292	PARN	100	98.305	ENSCAFG00020024126	PARN	100	91.850	Canis_lupus_dingo
ENSPCOG00000019292	PARN	100	100.000	ENSCHIG00000018143	PARN	100	91.379	Capra_hircus
ENSPCOG00000019292	PARN	73	63.305	ENSCAPG00000007984	PARN	78	63.305	Cavia_aperea
ENSPCOG00000019292	PARN	100	96.610	ENSCPOG00000002263	PARN	100	88.401	Cavia_porcellus
ENSPCOG00000019292	PARN	100	98.462	ENSCCAG00000030367	PARN	100	98.462	Cebus_capucinus
ENSPCOG00000019292	PARN	91	98.305	ENSCATG00000041368	PARN	100	98.305	Cercocebus_atys
ENSPCOG00000019292	PARN	100	94.915	ENSCLAG00000015406	PARN	99	88.558	Chinchilla_lanigera
ENSPCOG00000019292	PARN	100	98.305	ENSCSAG00000008142	PARN	100	93.271	Chlorocebus_sabaeus
ENSPCOG00000019292	PARN	98	100.000	ENSCHOG00000007014	PARN	100	74.485	Choloepus_hoffmanni
ENSPCOG00000019292	PARN	89	82.264	ENSCPBG00000006609	PARN	97	83.244	Chrysemys_picta_bellii
ENSPCOG00000019292	PARN	88	47.368	ENSCING00000010142	-	99	42.105	Ciona_intestinalis
ENSPCOG00000019292	PARN	91	98.305	ENSCANG00000023734	-	100	85.000	Colobus_angolensis_palliatus
ENSPCOG00000019292	PARN	100	98.305	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSPCOG00000019292	PARN	100	98.305	ENSCGRG00001012096	Parn	100	84.507	Cricetulus_griseus_chok1gshd
ENSPCOG00000019292	PARN	100	98.305	ENSCGRG00000004939	Parn	100	84.507	Cricetulus_griseus_crigri
ENSPCOG00000019292	PARN	91	77.966	ENSCSEG00000002064	parn	100	63.801	Cynoglossus_semilaevis
ENSPCOG00000019292	PARN	91	76.271	ENSCVAG00000014848	parn	83	70.377	Cyprinodon_variegatus
ENSPCOG00000019292	PARN	100	69.492	ENSDARG00000102634	parn	100	58.333	Danio_rerio
ENSPCOG00000019292	PARN	100	100.000	ENSDNOG00000000833	PARN	100	90.909	Dasypus_novemcinctus
ENSPCOG00000019292	PARN	91	98.305	ENSDORG00000027812	-	100	87.727	Dipodomys_ordii
ENSPCOG00000019292	PARN	92	93.333	ENSETEG00000014828	-	78	92.395	Echinops_telfairi
ENSPCOG00000019292	PARN	100	100.000	ENSEASG00005011400	PARN	100	91.066	Equus_asinus_asinus
ENSPCOG00000019292	PARN	100	98.305	ENSECAG00000017792	PARN	100	90.909	Equus_caballus
ENSPCOG00000019292	PARN	92	95.000	ENSEEUG00000010370	PARN	86	82.353	Erinaceus_europaeus
ENSPCOG00000019292	PARN	91	77.966	ENSELUG00000013139	parn	75	70.121	Esox_lucius
ENSPCOG00000019292	PARN	100	98.305	ENSFCAG00000044961	PARN	100	98.305	Felis_catus
ENSPCOG00000019292	PARN	57	30.263	ENSFALG00000012081	PNLDC1	70	30.263	Ficedula_albicollis
ENSPCOG00000019292	PARN	98	86.538	ENSFALG00000003911	PARN	98	80.983	Ficedula_albicollis
ENSPCOG00000019292	PARN	100	96.610	ENSFDAG00000009234	PARN	100	88.245	Fukomys_damarensis
ENSPCOG00000019292	PARN	98	70.312	ENSFHEG00000013738	parn	100	70.312	Fundulus_heteroclitus
ENSPCOG00000019292	PARN	91	76.271	ENSGMOG00000003231	parn	97	73.507	Gadus_morhua
ENSPCOG00000019292	PARN	100	89.831	ENSGALG00000003091	PARN	100	79.781	Gallus_gallus
ENSPCOG00000019292	PARN	91	77.966	ENSGAFG00000011061	parn	84	69.849	Gambusia_affinis
ENSPCOG00000019292	PARN	100	72.881	ENSGACG00000019501	parn	100	66.304	Gasterosteus_aculeatus
ENSPCOG00000019292	PARN	69	79.310	ENSGAGG00000023281	PARN	83	79.310	Gopherus_agassizii
ENSPCOG00000019292	PARN	100	98.462	ENSGGOG00000025224	PARN	100	98.462	Gorilla_gorilla
ENSPCOG00000019292	PARN	98	76.271	ENSHBUG00000017906	parn	92	72.514	Haplochromis_burtoni
ENSPCOG00000019292	PARN	100	96.610	ENSHGLG00000010886	PARN	100	88.088	Heterocephalus_glaber_female
ENSPCOG00000019292	PARN	100	96.610	ENSHGLG00100014659	PARN	100	88.088	Heterocephalus_glaber_male
ENSPCOG00000019292	PARN	80	82.692	ENSHCOG00000008683	parn	93	70.130	Hippocampus_comes
ENSPCOG00000019292	PARN	91	67.797	ENSIPUG00000012401	parn	84	59.725	Ictalurus_punctatus
ENSPCOG00000019292	PARN	100	98.305	ENSSTOG00000007519	PARN	100	89.655	Ictidomys_tridecemlineatus
ENSPCOG00000019292	PARN	100	100.000	ENSJJAG00000023049	Parn	100	86.520	Jaculus_jaculus
ENSPCOG00000019292	PARN	91	74.576	ENSKMAG00000009462	parn	83	70.940	Kryptolebias_marmoratus
ENSPCOG00000019292	PARN	91	76.271	ENSLBEG00000009167	parn	90	69.646	Labrus_bergylta
ENSPCOG00000019292	PARN	78	75.992	ENSLACG00000004207	PARN	100	73.821	Latimeria_chalumnae
ENSPCOG00000019292	PARN	91	79.661	ENSLOCG00000000715	parn	85	73.469	Lepisosteus_oculatus
ENSPCOG00000019292	PARN	100	100.000	ENSLAFG00000015036	PARN	100	90.282	Loxodonta_africana
ENSPCOG00000019292	PARN	100	98.305	ENSMFAG00000044852	PARN	100	98.305	Macaca_fascicularis
ENSPCOG00000019292	PARN	100	98.305	ENSMMUG00000018849	PARN	100	98.305	Macaca_mulatta
ENSPCOG00000019292	PARN	100	98.305	ENSMNEG00000045108	PARN	100	98.305	Macaca_nemestrina
ENSPCOG00000019292	PARN	100	98.305	ENSMLEG00000031743	PARN	100	98.305	Mandrillus_leucophaeus
ENSPCOG00000019292	PARN	91	76.271	ENSMAMG00000006939	parn	82	70.326	Mastacembelus_armatus
ENSPCOG00000019292	PARN	98	76.271	ENSMZEG00005013590	parn	95	71.025	Maylandia_zebra
ENSPCOG00000019292	PARN	93	96.552	ENSMGAG00000001004	PARN	95	79.605	Meleagris_gallopavo
ENSPCOG00000019292	PARN	95	94.286	ENSMAUG00000008025	Parn	100	79.134	Mesocricetus_auratus
ENSPCOG00000019292	PARN	100	100.000	ENSMICG00000016053	PARN	100	100.000	Microcebus_murinus
ENSPCOG00000019292	PARN	91	96.610	ENSMOCG00000022211	Parn	100	88.866	Microtus_ochrogaster
ENSPCOG00000019292	PARN	100	77.966	ENSMMOG00000011333	parn	89	72.477	Mola_mola
ENSPCOG00000019292	PARN	92	91.667	ENSMODG00000004915	PARN	99	91.129	Monodelphis_domestica
ENSPCOG00000019292	PARN	91	75.000	ENSMALG00000019426	parn	91	75.791	Monopterus_albus
ENSPCOG00000019292	PARN	100	96.610	MGP_CAROLIEiJ_G0020466	Parn	100	84.796	Mus_caroli
ENSPCOG00000019292	PARN	100	94.915	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSPCOG00000019292	PARN	100	98.305	MGP_PahariEiJ_G0016172	Parn	100	84.639	Mus_pahari
ENSPCOG00000019292	PARN	100	96.610	MGP_SPRETEiJ_G0021361	Parn	100	84.796	Mus_spretus
ENSPCOG00000019292	PARN	100	100.000	ENSMPUG00000014464	PARN	100	91.066	Mustela_putorius_furo
ENSPCOG00000019292	PARN	91	96.610	ENSMLUG00000005414	PARN	100	91.700	Myotis_lucifugus
ENSPCOG00000019292	PARN	91	100.000	ENSNGAG00000024082	-	100	88.636	Nannospalax_galili
ENSPCOG00000019292	PARN	91	76.271	ENSNBRG00000006805	parn	93	72.000	Neolamprologus_brichardi
ENSPCOG00000019292	PARN	100	98.462	ENSNLEG00000010241	PARN	100	98.462	Nomascus_leucogenys
ENSPCOG00000019292	PARN	92	94.231	ENSMEUG00000008178	-	68	94.231	Notamacropus_eugenii
ENSPCOG00000019292	PARN	98	100.000	ENSOPRG00000012187	PARN	100	86.529	Ochotona_princeps
ENSPCOG00000019292	PARN	100	96.610	ENSODEG00000001617	PARN	100	79.875	Octodon_degus
ENSPCOG00000019292	PARN	100	76.271	ENSONIG00000000151	parn	100	66.769	Oreochromis_niloticus
ENSPCOG00000019292	PARN	81	78.684	ENSOANG00000020155	-	97	79.211	Ornithorhynchus_anatinus
ENSPCOG00000019292	PARN	99	92.857	ENSOCUG00000000322	PARN	100	89.134	Oryctolagus_cuniculus
ENSPCOG00000019292	PARN	100	75.385	ENSORLG00000024893	-	100	66.516	Oryzias_latipes
ENSPCOG00000019292	PARN	93	77.966	ENSORLG00020010313	parn	88	67.541	Oryzias_latipes_hni
ENSPCOG00000019292	PARN	93	77.966	ENSORLG00015000300	parn	88	67.377	Oryzias_latipes_hsok
ENSPCOG00000019292	PARN	91	77.966	ENSOMEG00000019555	parn	97	66.063	Oryzias_melastigma
ENSPCOG00000019292	PARN	92	96.667	ENSOGAG00000014626	PARN	100	91.313	Otolemur_garnettii
ENSPCOG00000019292	PARN	91	100.000	ENSOARG00000007574	PARN	100	94.534	Ovis_aries
ENSPCOG00000019292	PARN	100	98.462	ENSPPAG00000031438	PARN	100	98.462	Pan_paniscus
ENSPCOG00000019292	PARN	100	98.305	ENSPPRG00000018583	PARN	100	98.305	Panthera_pardus
ENSPCOG00000019292	PARN	100	98.305	ENSPTIG00000012135	PARN	100	98.305	Panthera_tigris_altaica
ENSPCOG00000019292	PARN	100	98.462	ENSPTRG00000007792	PARN	100	98.462	Pan_troglodytes
ENSPCOG00000019292	PARN	100	98.305	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSPCOG00000019292	PARN	96	77.966	ENSPKIG00000022807	parn	95	64.715	Paramormyrops_kingsleyae
ENSPCOG00000019292	PARN	98	88.136	ENSPSIG00000014804	PARN	100	80.763	Pelodiscus_sinensis
ENSPCOG00000019292	PARN	91	74.576	ENSPMGG00000014431	parn	77	73.655	Periophthalmus_magnuspinnatus
ENSPCOG00000019292	PARN	100	96.610	ENSPEMG00000018439	Parn	100	82.132	Peromyscus_maniculatus_bairdii
ENSPCOG00000019292	PARN	91	57.627	ENSPMAG00000003956	parn	99	65.192	Petromyzon_marinus
ENSPCOG00000019292	PARN	100	93.846	ENSPCIG00000001259	PARN	100	93.846	Phascolarctos_cinereus
ENSPCOG00000019292	PARN	91	77.966	ENSPFOG00000012823	parn	84	69.580	Poecilia_formosa
ENSPCOG00000019292	PARN	91	77.966	ENSPLAG00000006395	parn	84	69.748	Poecilia_latipinna
ENSPCOG00000019292	PARN	91	77.966	ENSPMEG00000007711	parn	84	69.748	Poecilia_mexicana
ENSPCOG00000019292	PARN	91	77.966	ENSPREG00000000147	parn	84	69.412	Poecilia_reticulata
ENSPCOG00000019292	PARN	100	96.610	ENSPPYG00000007123	PARN	100	92.668	Pongo_abelii
ENSPCOG00000019292	PARN	93	100.000	ENSPCAG00000001741	PARN	100	79.669	Procavia_capensis
ENSPCOG00000019292	PARN	98	100.000	ENSPVAG00000002547	PARN	100	87.797	Pteropus_vampyrus
ENSPCOG00000019292	PARN	98	76.271	ENSPNYG00000006835	parn	95	68.430	Pundamilia_nyererei
ENSPCOG00000019292	PARN	83	70.699	ENSPNAG00000018905	parn	84	70.699	Pygocentrus_nattereri
ENSPCOG00000019292	PARN	100	94.915	ENSRNOG00000002912	Parn	97	87.755	Rattus_norvegicus
ENSPCOG00000019292	PARN	71	89.489	ENSRBIG00000018726	PARN	100	89.489	Rhinopithecus_bieti
ENSPCOG00000019292	PARN	71	89.489	ENSRROG00000011162	-	100	89.489	Rhinopithecus_roxellana
ENSPCOG00000019292	PARN	92	96.667	ENSRROG00000020116	-	86	96.721	Rhinopithecus_roxellana
ENSPCOG00000019292	PARN	100	98.305	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSPCOG00000019292	PARN	83	90.741	ENSSHAG00000008493	PARN	94	89.713	Sarcophilus_harrisii
ENSPCOG00000019292	PARN	94	77.966	ENSSFOG00015014165	parn	92	71.652	Scleropages_formosus
ENSPCOG00000019292	PARN	100	68.182	ENSSMAG00000000685	parn	100	62.866	Scophthalmus_maximus
ENSPCOG00000019292	PARN	91	74.576	ENSSDUG00000014555	parn	83	71.233	Seriola_dumerili
ENSPCOG00000019292	PARN	91	74.576	ENSSLDG00000007603	-	100	63.348	Seriola_lalandi_dorsalis
ENSPCOG00000019292	PARN	91	77.202	ENSSARG00000014339	PARN	100	77.202	Sorex_araneus
ENSPCOG00000019292	PARN	100	88.136	ENSSPUG00000007719	PARN	100	83.699	Sphenodon_punctatus
ENSPCOG00000019292	PARN	91	76.271	ENSSPAG00000007095	parn	89	70.128	Stegastes_partitus
ENSPCOG00000019292	PARN	100	100.000	ENSSSCG00000007878	PARN	89	91.066	Sus_scrofa
ENSPCOG00000019292	PARN	99	82.143	ENSTGUG00000004971	PARN	99	81.201	Taeniopygia_guttata
ENSPCOG00000019292	PARN	100	69.697	ENSTRUG00000015208	-	94	69.697	Takifugu_rubripes
ENSPCOG00000019292	PARN	100	77.966	ENSTNIG00000008252	parn	100	66.873	Tetraodon_nigroviridis
ENSPCOG00000019292	PARN	91	77.893	ENSTBEG00000010407	PARN	100	77.893	Tupaia_belangeri
ENSPCOG00000019292	PARN	98	100.000	ENSTTRG00000002843	PARN	100	86.371	Tursiops_truncatus
ENSPCOG00000019292	PARN	67	82.898	ENSUAMG00000008283	PARN	90	82.898	Ursus_americanus
ENSPCOG00000019292	PARN	100	100.000	ENSUMAG00000004527	PARN	100	91.693	Ursus_maritimus
ENSPCOG00000019292	PARN	95	100.000	ENSVPAG00000008968	PARN	100	87.948	Vicugna_pacos
ENSPCOG00000019292	PARN	100	98.305	ENSVVUG00000019509	PARN	100	92.006	Vulpes_vulpes
ENSPCOG00000019292	PARN	100	80.328	ENSXETG00000010994	parn	100	80.989	Xenopus_tropicalis
ENSPCOG00000019292	PARN	91	77.966	ENSXCOG00000015990	parn	96	67.121	Xiphophorus_couchianus
ENSPCOG00000019292	PARN	91	77.966	ENSXMAG00000014783	parn	84	69.748	Xiphophorus_maculatus