EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000020035 (Gene tree)
Gene ID: 105817225
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 358136 bases
Position: chrKQ023736.1:3695802-4053937
Accession: 105817225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000016531	CMS1	PF14617.6	3.5e-33	1	1
ENSPCOP00000016530	CMS1	PF14617.6	4.4e-33	1	1
ENSPCOP00000016531	DEAD	PF00270.29	6.9e-06	1	1
ENSPCOP00000016530	DEAD	PF00270.29	8.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000027159	CMSS1-202	783	-	ENSPCOP00000016531	260 (aa)	-	A0A2K6FR96
ENSPCOT00000027158	CMSS1-201	837	XM_012652856	ENSPCOP00000016530	278 (aa)	XP_012508310	A0A2K6FRC7

Gene Model

Click here to download ENSPCOG00000020035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000020035's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000020035	CMSS1	100	90.681	ENSG00000184220	CMSS1	98	93.750	Homo_sapiens
ENSPCOG00000020035	CMSS1	78	64.851	ENSAPOG00000010604	cmss1	100	57.600	Acanthochromis_polyacanthus
ENSPCOG00000020035	CMSS1	99	90.347	ENSAMEG00000004092	CMSS1	100	90.347	Ailuropoda_melanoleuca
ENSPCOG00000020035	CMSS1	78	54.950	ENSACIG00000021854	cmss1	91	51.653	Amphilophus_citrinellus
ENSPCOG00000020035	CMSS1	100	53.633	ENSAOCG00000013361	cmss1	100	53.020	Amphiprion_ocellaris
ENSPCOG00000020035	CMSS1	100	53.103	ENSAPEG00000005829	cmss1	100	54.296	Amphiprion_percula
ENSPCOG00000020035	CMSS1	100	51.877	ENSATEG00000008209	cmss1	100	54.296	Anabas_testudineus
ENSPCOG00000020035	CMSS1	88	68.261	ENSAPLG00000010542	CMSS1	100	67.391	Anas_platyrhynchos
ENSPCOG00000020035	CMSS1	99	62.069	ENSACAG00000011065	CMSS1	97	61.742	Anolis_carolinensis
ENSPCOG00000020035	CMSS1	100	90.840	ENSANAG00000023565	CMSS1	100	90.840	Aotus_nancymaae
ENSPCOG00000020035	CMSS1	100	52.234	ENSACLG00000027294	cmss1	100	53.265	Astatotilapia_calliptera
ENSPCOG00000020035	CMSS1	100	46.801	ENSAMXG00000002046	cmss1	100	47.797	Astyanax_mexicanus
ENSPCOG00000020035	CMSS1	100	88.889	ENSBTAG00000013663	CMSS1	100	89.247	Bos_taurus
ENSPCOG00000020035	CMSS1	100	90.357	ENSCJAG00000000610	CMSS1	100	90.357	Callithrix_jacchus
ENSPCOG00000020035	CMSS1	99	93.023	ENSCAFG00000009230	CMSS1	96	90.335	Canis_familiaris
ENSPCOG00000020035	CMSS1	89	86.638	ENSCAFG00020024156	-	76	82.857	Canis_lupus_dingo
ENSPCOG00000020035	CMSS1	98	92.607	ENSCAFG00020009464	-	95	92.278	Canis_lupus_dingo
ENSPCOG00000020035	CMSS1	98	89.105	ENSCHIG00000013003	CMSS1	93	89.105	Capra_hircus
ENSPCOG00000020035	CMSS1	99	88.327	ENSTSYG00000009266	CMSS1	99	88.327	Carlito_syrichta
ENSPCOG00000020035	CMSS1	86	73.362	ENSCAPG00000013584	CMSS1	100	69.231	Cavia_aperea
ENSPCOG00000020035	CMSS1	100	87.097	ENSCPOG00000014680	CMSS1	100	87.097	Cavia_porcellus
ENSPCOG00000020035	CMSS1	100	91.786	ENSCCAG00000034685	CMSS1	100	91.786	Cebus_capucinus
ENSPCOG00000020035	CMSS1	100	91.188	ENSCATG00000031980	CMSS1	100	91.188	Cercocebus_atys
ENSPCOG00000020035	CMSS1	88	94.323	ENSCLAG00000011241	CMSS1	98	94.323	Chinchilla_lanigera
ENSPCOG00000020035	CMSS1	94	93.061	ENSCSAG00000006024	CMSS1	100	93.061	Chlorocebus_sabaeus
ENSPCOG00000020035	CMSS1	100	69.534	ENSCHOG00000012098	CMSS1	100	69.534	Choloepus_hoffmanni
ENSPCOG00000020035	CMSS1	75	41.000	ENSCING00000014848	-	100	42.246	Ciona_intestinalis
ENSPCOG00000020035	CMSS1	100	90.681	ENSCANG00000031337	CMSS1	100	90.681	Colobus_angolensis_palliatus
ENSPCOG00000020035	CMSS1	100	81.655	ENSCGRG00001014305	Cmss1	100	81.655	Cricetulus_griseus_chok1gshd
ENSPCOG00000020035	CMSS1	97	84.462	ENSCGRG00000006722	Cmss1	98	84.462	Cricetulus_griseus_crigri
ENSPCOG00000020035	CMSS1	100	50.502	ENSCSEG00000004958	cmss1	100	50.825	Cynoglossus_semilaevis
ENSPCOG00000020035	CMSS1	100	52.941	ENSCVAG00000005039	cmss1	100	54.138	Cyprinodon_variegatus
ENSPCOG00000020035	CMSS1	100	46.959	ENSDARG00000112579	cmss1	100	47.279	Danio_rerio
ENSPCOG00000020035	CMSS1	99	86.873	ENSDNOG00000040418	CMSS1	94	85.338	Dasypus_novemcinctus
ENSPCOG00000020035	CMSS1	100	87.814	ENSDORG00000010461	Cmss1	100	87.814	Dipodomys_ordii
ENSPCOG00000020035	CMSS1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSPCOG00000020035	CMSS1	88	93.860	ENSEASG00005010966	CMSS1	99	93.607	Equus_asinus_asinus
ENSPCOG00000020035	CMSS1	98	89.062	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSPCOG00000020035	CMSS1	100	56.272	ENSEEUG00000007624	-	100	55.914	Erinaceus_europaeus
ENSPCOG00000020035	CMSS1	100	52.333	ENSELUG00000019459	cmss1	100	53.000	Esox_lucius
ENSPCOG00000020035	CMSS1	100	93.907	ENSFCAG00000044577	CMSS1	100	93.907	Felis_catus
ENSPCOG00000020035	CMSS1	91	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSPCOG00000020035	CMSS1	88	92.544	ENSFDAG00000012577	CMSS1	100	92.544	Fukomys_damarensis
ENSPCOG00000020035	CMSS1	87	61.472	ENSFHEG00000012008	cmss1	95	61.472	Fundulus_heteroclitus
ENSPCOG00000020035	CMSS1	99	52.857	ENSGMOG00000016729	cmss1	100	52.857	Gadus_morhua
ENSPCOG00000020035	CMSS1	99	64.729	ENSGALG00000015267	CMSS1	99	64.368	Gallus_gallus
ENSPCOG00000020035	CMSS1	80	64.251	ENSGAFG00000021217	cmss1	76	64.000	Gambusia_affinis
ENSPCOG00000020035	CMSS1	99	49.110	ENSGACG00000002798	cmss1	100	49.462	Gasterosteus_aculeatus
ENSPCOG00000020035	CMSS1	91	69.620	ENSGAGG00000019861	CMSS1	98	65.000	Gopherus_agassizii
ENSPCOG00000020035	CMSS1	100	91.188	ENSGGOG00000014125	CMSS1	100	91.188	Gorilla_gorilla
ENSPCOG00000020035	CMSS1	100	52.759	ENSHBUG00000008431	cmss1	100	52.759	Haplochromis_burtoni
ENSPCOG00000020035	CMSS1	98	87.402	ENSHGLG00000019481	CMSS1	100	87.402	Heterocephalus_glaber_female
ENSPCOG00000020035	CMSS1	98	87.059	ENSHGLG00100010314	CMSS1	99	87.059	Heterocephalus_glaber_male
ENSPCOG00000020035	CMSS1	100	54.153	ENSHCOG00000003222	cmss1	100	55.593	Hippocampus_comes
ENSPCOG00000020035	CMSS1	100	48.980	ENSIPUG00000011591	cmss1	100	49.324	Ictalurus_punctatus
ENSPCOG00000020035	CMSS1	100	90.647	ENSSTOG00000019366	CMSS1	100	90.647	Ictidomys_tridecemlineatus
ENSPCOG00000020035	CMSS1	100	86.738	ENSJJAG00000014894	Cmss1	100	86.738	Jaculus_jaculus
ENSPCOG00000020035	CMSS1	78	54.950	ENSKMAG00000002390	cmss1	80	54.500	Kryptolebias_marmoratus
ENSPCOG00000020035	CMSS1	85	52.917	ENSLBEG00000006298	cmss1	82	58.209	Labrus_bergylta
ENSPCOG00000020035	CMSS1	88	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSPCOG00000020035	CMSS1	100	53.004	ENSLOCG00000009391	cmss1	100	54.417	Lepisosteus_oculatus
ENSPCOG00000020035	CMSS1	88	90.789	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSPCOG00000020035	CMSS1	100	91.756	ENSMFAG00000045006	CMSS1	100	91.756	Macaca_fascicularis
ENSPCOG00000020035	CMSS1	100	91.398	ENSMMUG00000002939	CMSS1	98	93.636	Macaca_mulatta
ENSPCOG00000020035	CMSS1	100	91.398	ENSMNEG00000031315	CMSS1	100	91.398	Macaca_nemestrina
ENSPCOG00000020035	CMSS1	100	91.039	ENSMLEG00000033660	CMSS1	100	91.039	Mandrillus_leucophaeus
ENSPCOG00000020035	CMSS1	100	53.378	ENSMAMG00000017176	cmss1	100	53.793	Mastacembelus_armatus
ENSPCOG00000020035	CMSS1	100	52.234	ENSMZEG00005021886	cmss1	100	53.265	Maylandia_zebra
ENSPCOG00000020035	CMSS1	88	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSPCOG00000020035	CMSS1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSPCOG00000020035	CMSS1	100	97.122	ENSMICG00000048977	CMSS1	100	97.122	Microcebus_murinus
ENSPCOG00000020035	CMSS1	100	82.796	ENSMOCG00000021937	Cmss1	100	82.796	Microtus_ochrogaster
ENSPCOG00000020035	CMSS1	78	61.881	ENSMMOG00000019794	cmss1	83	61.500	Mola_mola
ENSPCOG00000020035	CMSS1	99	73.745	ENSMODG00000002275	CMSS1	98	73.106	Monodelphis_domestica
ENSPCOG00000020035	CMSS1	100	53.952	ENSMALG00000004250	cmss1	100	52.921	Monopterus_albus
ENSPCOG00000020035	CMSS1	100	82.143	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.143	Mus_caroli
ENSPCOG00000020035	CMSS1	100	83.214	ENSMUSG00000022748	Cmss1	100	83.214	Mus_musculus
ENSPCOG00000020035	CMSS1	100	82.500	MGP_PahariEiJ_G0016524	Cmss1	100	82.500	Mus_pahari
ENSPCOG00000020035	CMSS1	100	82.500	MGP_SPRETEiJ_G0021724	Cmss1	100	82.500	Mus_spretus
ENSPCOG00000020035	CMSS1	99	91.892	ENSMPUG00000011324	CMSS1	100	91.892	Mustela_putorius_furo
ENSPCOG00000020035	CMSS1	99	91.154	ENSMLUG00000001131	CMSS1	99	91.154	Myotis_lucifugus
ENSPCOG00000020035	CMSS1	100	87.097	ENSNGAG00000020316	Cmss1	100	87.097	Nannospalax_galili
ENSPCOG00000020035	CMSS1	100	52.921	ENSNBRG00000003095	cmss1	100	53.265	Neolamprologus_brichardi
ENSPCOG00000020035	CMSS1	100	92.473	ENSNLEG00000034172	CMSS1	100	92.473	Nomascus_leucogenys
ENSPCOG00000020035	CMSS1	88	65.789	ENSMEUG00000014505	CMSS1	100	65.789	Notamacropus_eugenii
ENSPCOG00000020035	CMSS1	100	90.288	ENSOPRG00000002986	CMSS1	100	90.288	Ochotona_princeps
ENSPCOG00000020035	CMSS1	100	81.851	ENSODEG00000003558	-	100	81.851	Octodon_degus
ENSPCOG00000020035	CMSS1	100	71.223	ENSODEG00000009446	-	100	71.223	Octodon_degus
ENSPCOG00000020035	CMSS1	100	76.344	ENSODEG00000001853	-	100	76.344	Octodon_degus
ENSPCOG00000020035	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSPCOG00000020035	CMSS1	78	62.871	ENSONIG00000006678	cmss1	93	56.612	Oreochromis_niloticus
ENSPCOG00000020035	CMSS1	99	70.428	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSPCOG00000020035	CMSS1	99	91.473	ENSOCUG00000025366	CMSS1	93	91.473	Oryctolagus_cuniculus
ENSPCOG00000020035	CMSS1	100	56.842	ENSORLG00000020340	cmss1	100	57.193	Oryzias_latipes
ENSPCOG00000020035	CMSS1	88	54.585	ENSORLG00020012235	cmss1	85	58.500	Oryzias_latipes_hni
ENSPCOG00000020035	CMSS1	78	58.416	ENSORLG00015015551	cmss1	75	58.000	Oryzias_latipes_hsok
ENSPCOG00000020035	CMSS1	100	54.608	ENSOMEG00000012555	cmss1	100	55.363	Oryzias_melastigma
ENSPCOG00000020035	CMSS1	88	95.175	ENSOGAG00000002045	CMSS1	100	95.175	Otolemur_garnettii
ENSPCOG00000020035	CMSS1	98	89.147	ENSOARG00000017899	CMSS1	89	89.147	Ovis_aries
ENSPCOG00000020035	CMSS1	100	91.571	ENSPPAG00000038515	CMSS1	95	92.248	Pan_paniscus
ENSPCOG00000020035	CMSS1	100	92.832	ENSPPRG00000016767	CMSS1	100	92.832	Panthera_pardus
ENSPCOG00000020035	CMSS1	100	92.473	ENSPTIG00000018274	CMSS1	100	92.473	Panthera_tigris_altaica
ENSPCOG00000020035	CMSS1	100	91.039	ENSPTRG00000015157	CMSS1	100	92.653	Pan_troglodytes
ENSPCOG00000020035	CMSS1	100	87.739	ENSPANG00000019980	CMSS1	99	88.372	Papio_anubis
ENSPCOG00000020035	CMSS1	87	61.739	ENSPKIG00000012609	cmss1	97	57.692	Paramormyrops_kingsleyae
ENSPCOG00000020035	CMSS1	88	71.179	ENSPSIG00000003849	CMSS1	100	71.179	Pelodiscus_sinensis
ENSPCOG00000020035	CMSS1	78	62.069	ENSPMGG00000010286	cmss1	86	61.692	Periophthalmus_magnuspinnatus
ENSPCOG00000020035	CMSS1	100	83.571	ENSPEMG00000016384	Cmss1	100	83.571	Peromyscus_maniculatus_bairdii
ENSPCOG00000020035	CMSS1	78	53.431	ENSPMAG00000001146	cmss1	98	53.500	Petromyzon_marinus
ENSPCOG00000020035	CMSS1	99	73.256	ENSPCIG00000015656	CMSS1	98	73.256	Phascolarctos_cinereus
ENSPCOG00000020035	CMSS1	100	50.847	ENSPFOG00000016849	cmss1	100	55.208	Poecilia_formosa
ENSPCOG00000020035	CMSS1	100	50.508	ENSPLAG00000008323	cmss1	100	54.861	Poecilia_latipinna
ENSPCOG00000020035	CMSS1	100	50.505	ENSPMEG00000021020	cmss1	100	54.514	Poecilia_mexicana
ENSPCOG00000020035	CMSS1	90	59.751	ENSPREG00000007618	cmss1	90	56.000	Poecilia_reticulata
ENSPCOG00000020035	CMSS1	100	90.323	ENSPPYG00000013606	CMSS1	100	90.323	Pongo_abelii
ENSPCOG00000020035	CMSS1	100	78.853	ENSPVAG00000017031	CMSS1	100	78.853	Pteropus_vampyrus
ENSPCOG00000020035	CMSS1	91	52.453	ENSPNYG00000013428	cmss1	97	53.585	Pundamilia_nyererei
ENSPCOG00000020035	CMSS1	100	49.492	ENSPNAG00000007912	cmss1	100	50.169	Pygocentrus_nattereri
ENSPCOG00000020035	CMSS1	98	82.101	ENSRNOG00000027888	Cmss1	98	82.101	Rattus_norvegicus
ENSPCOG00000020035	CMSS1	100	89.964	ENSRBIG00000037931	CMSS1	100	89.964	Rhinopithecus_bieti
ENSPCOG00000020035	CMSS1	100	89.964	ENSRROG00000042910	CMSS1	100	89.964	Rhinopithecus_roxellana
ENSPCOG00000020035	CMSS1	100	91.221	ENSSBOG00000030980	CMSS1	100	91.221	Saimiri_boliviensis_boliviensis
ENSPCOG00000020035	CMSS1	95	74.206	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSPCOG00000020035	CMSS1	100	52.881	ENSSFOG00015001509	cmss1	100	53.793	Scleropages_formosus
ENSPCOG00000020035	CMSS1	100	53.559	ENSSMAG00000001653	cmss1	100	54.795	Scophthalmus_maximus
ENSPCOG00000020035	CMSS1	100	54.828	ENSSDUG00000007719	cmss1	100	55.326	Seriola_dumerili
ENSPCOG00000020035	CMSS1	80	64.251	ENSSLDG00000012300	cmss1	98	51.046	Seriola_lalandi_dorsalis
ENSPCOG00000020035	CMSS1	100	75.357	ENSSARG00000003584	CMSS1	100	75.357	Sorex_araneus
ENSPCOG00000020035	CMSS1	87	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSPCOG00000020035	CMSS1	93	54.717	ENSSPAG00000019182	cmss1	82	54.307	Stegastes_partitus
ENSPCOG00000020035	CMSS1	100	93.190	ENSSSCG00000011970	CMSS1	100	93.190	Sus_scrofa
ENSPCOG00000020035	CMSS1	88	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSPCOG00000020035	CMSS1	100	50.355	ENSTRUG00000015265	cmss1	100	51.773	Takifugu_rubripes
ENSPCOG00000020035	CMSS1	78	55.446	ENSTNIG00000002880	cmss1	95	46.494	Tetraodon_nigroviridis
ENSPCOG00000020035	CMSS1	100	61.786	ENSTBEG00000016722	CMSS1	100	61.786	Tupaia_belangeri
ENSPCOG00000020035	CMSS1	100	88.172	ENSTTRG00000001562	CMSS1	100	88.172	Tursiops_truncatus
ENSPCOG00000020035	CMSS1	99	91.538	ENSUAMG00000024209	CMSS1	100	95.067	Ursus_americanus
ENSPCOG00000020035	CMSS1	100	90.421	ENSUMAG00000001983	CMSS1	99	90.698	Ursus_maritimus
ENSPCOG00000020035	CMSS1	100	69.892	ENSVPAG00000000263	CMSS1	100	69.892	Vicugna_pacos
ENSPCOG00000020035	CMSS1	87	92.035	ENSVVUG00000007776	-	89	92.035	Vulpes_vulpes
ENSPCOG00000020035	CMSS1	94	93.469	ENSVVUG00000021647	-	99	93.469	Vulpes_vulpes
ENSPCOG00000020035	CMSS1	100	57.092	ENSXETG00000011858	cmss1	100	56.738	Xenopus_tropicalis
ENSPCOG00000020035	CMSS1	80	63.462	ENSXCOG00000018724	cmss1	68	63.500	Xiphophorus_couchianus
ENSPCOG00000020035	CMSS1	80	63.462	ENSXMAG00000011243	cmss1	75	63.500	Xiphophorus_maculatus