EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000020672 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: -
Full Name: RNA-binding protein 42-like
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 8622 bases
Position: chrKQ023269.1:1319457-1328078
Accession: 105816232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000017698	RRM_1	PF00076.22	5.8e-18	1	1
ENSPCOP00000017696	RRM_1	PF00076.22	6.1e-18	1	1
ENSPCOP00000017695	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000028335	RBM42-203	1230	-	ENSPCOP00000017698	409 (aa)	-	A0A2K6FUN5
ENSPCOT00000028332	RBM42-201	1245	XM_012651591	ENSPCOP00000017695	414 (aa)	XP_012507045	A0A2K6FUM8
ENSPCOT00000028333	RBM42-202	1242	-	ENSPCOP00000017696	413 (aa)	-	A0A2K6FUP2

Gene Model

Click here to download ENSPCOG00000020672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000020672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000020672	RBM42	81	99.700	ENSPCOG00000026433	-	97	76.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000020672	RBM42	81	99.099	ENSG00000126254	RBM42	97	75.870	Homo_sapiens
ENSPCOG00000020672	RBM42	81	98.806	ENSAMEG00000000524	RBM42	70	98.806	Ailuropoda_melanoleuca
ENSPCOG00000020672	RBM42	81	98.799	ENSANAG00000027537	RBM42	97	76.279	Aotus_nancymaae
ENSPCOG00000020672	RBM42	81	97.598	ENSBTAG00000013440	RBM42	70	97.598	Bos_taurus
ENSPCOG00000020672	RBM42	81	96.697	ENSCJAG00000010220	RBM42	97	76.279	Callithrix_jacchus
ENSPCOG00000020672	RBM42	81	90.361	ENSCAFG00020018628	RBM42	82	82.934	Canis_lupus_dingo
ENSPCOG00000020672	RBM42	81	97.289	ENSCHIG00000009518	RBM42	70	96.997	Capra_hircus
ENSPCOG00000020672	RBM42	81	98.503	ENSTSYG00000014688	RBM42	97	74.246	Carlito_syrichta
ENSPCOG00000020672	RBM42	81	97.898	ENSCAPG00000009566	RBM42	86	97.898	Cavia_aperea
ENSPCOG00000020672	RBM42	81	97.898	ENSCPOG00000012365	RBM42	69	97.898	Cavia_porcellus
ENSPCOG00000020672	RBM42	81	99.099	ENSCCAG00000034440	RBM42	97	76.279	Cebus_capucinus
ENSPCOG00000020672	RBM42	81	98.799	ENSCATG00000041924	RBM42	97	75.638	Cercocebus_atys
ENSPCOG00000020672	RBM42	81	97.598	ENSCLAG00000012865	RBM42	69	97.598	Chinchilla_lanigera
ENSPCOG00000020672	RBM42	75	98.377	ENSCSAG00000004422	RBM42	68	98.377	Chlorocebus_sabaeus
ENSPCOG00000020672	RBM42	81	98.498	ENSCANG00000030272	RBM42	81	98.684	Colobus_angolensis_palliatus
ENSPCOG00000020672	RBM42	81	99.099	ENSCGRG00001018540	Rbm42	70	99.099	Cricetulus_griseus_chok1gshd
ENSPCOG00000020672	RBM42	81	98.214	ENSDNOG00000037397	RBM42	70	98.214	Dasypus_novemcinctus
ENSPCOG00000020672	RBM42	81	98.198	ENSDORG00000013001	Rbm42	70	98.198	Dipodomys_ordii
ENSPCOG00000020672	RBM42	66	80.741	ENSETEG00000007878	RBM42	59	77.778	Echinops_telfairi
ENSPCOG00000020672	RBM42	75	98.701	ENSEASG00005001074	RBM42	69	98.701	Equus_asinus_asinus
ENSPCOG00000020672	RBM42	75	98.701	ENSECAG00000018215	RBM42	69	98.701	Equus_caballus
ENSPCOG00000020672	RBM42	81	99.099	ENSFCAG00000006376	RBM42	97	76.279	Felis_catus
ENSPCOG00000020672	RBM42	81	96.418	ENSFDAG00000007440	RBM42	70	96.418	Fukomys_damarensis
ENSPCOG00000020672	RBM42	81	99.099	ENSGGOG00000009972	RBM42	97	75.870	Gorilla_gorilla
ENSPCOG00000020672	RBM42	81	97.598	ENSHGLG00000008418	RBM42	70	97.598	Heterocephalus_glaber_female
ENSPCOG00000020672	RBM42	81	97.598	ENSHGLG00100018667	RBM42	70	97.598	Heterocephalus_glaber_male
ENSPCOG00000020672	RBM42	81	96.997	ENSSTOG00000013050	RBM42	68	98.701	Ictidomys_tridecemlineatus
ENSPCOG00000020672	RBM42	81	97.898	ENSJJAG00000010421	Rbm42	70	97.898	Jaculus_jaculus
ENSPCOG00000020672	RBM42	81	95.495	ENSLAFG00000014993	RBM42	69	95.495	Loxodonta_africana
ENSPCOG00000020672	RBM42	81	98.799	ENSMFAG00000002758	RBM42	97	75.638	Macaca_fascicularis
ENSPCOG00000020672	RBM42	81	98.799	ENSMMUG00000018954	RBM42	73	97.024	Macaca_mulatta
ENSPCOG00000020672	RBM42	81	98.799	ENSMNEG00000030009	RBM42	97	75.638	Macaca_nemestrina
ENSPCOG00000020672	RBM42	81	98.799	ENSMLEG00000036119	RBM42	97	80.387	Mandrillus_leucophaeus
ENSPCOG00000020672	RBM42	81	99.099	ENSMICG00000009880	RBM42	97	76.279	Microcebus_murinus
ENSPCOG00000020672	RBM42	81	98.498	ENSMOCG00000000405	Rbm42	70	98.498	Microtus_ochrogaster
ENSPCOG00000020672	RBM42	81	99.099	MGP_CAROLIEiJ_G0029536	Rbm42	70	99.099	Mus_caroli
ENSPCOG00000020672	RBM42	81	99.099	ENSMUSG00000036733	Rbm42	70	99.099	Mus_musculus
ENSPCOG00000020672	RBM42	81	99.099	MGP_PahariEiJ_G0012770	Rbm42	70	99.099	Mus_pahari
ENSPCOG00000020672	RBM42	81	99.099	MGP_SPRETEiJ_G0030632	Rbm42	70	99.099	Mus_spretus
ENSPCOG00000020672	RBM42	75	99.026	ENSMPUG00000006288	RBM42	69	99.026	Mustela_putorius_furo
ENSPCOG00000020672	RBM42	81	98.799	ENSMLUG00000011334	RBM42	70	98.799	Myotis_lucifugus
ENSPCOG00000020672	RBM42	81	99.399	ENSNGAG00000019698	Rbm42	70	99.399	Nannospalax_galili
ENSPCOG00000020672	RBM42	81	98.799	ENSNLEG00000011272	-	98	89.062	Nomascus_leucogenys
ENSPCOG00000020672	RBM42	81	88.323	ENSMEUG00000016300	RBM42	71	86.471	Notamacropus_eugenii
ENSPCOG00000020672	RBM42	81	95.495	ENSOPRG00000001229	RBM42	70	92.793	Ochotona_princeps
ENSPCOG00000020672	RBM42	81	97.598	ENSODEG00000013705	RBM42	69	97.598	Octodon_degus
ENSPCOG00000020672	RBM42	75	97.727	ENSOCUG00000003337	RBM42	68	97.727	Oryctolagus_cuniculus
ENSPCOG00000020672	RBM42	81	97.898	ENSOGAG00000004144	RBM42	70	97.898	Otolemur_garnettii
ENSPCOG00000020672	RBM42	81	86.103	ENSOARG00000004926	RBM42	68	90.361	Ovis_aries
ENSPCOG00000020672	RBM42	81	99.099	ENSPPAG00000037315	RBM42	97	81.068	Pan_paniscus
ENSPCOG00000020672	RBM42	81	99.099	ENSPPRG00000016784	RBM42	97	76.279	Panthera_pardus
ENSPCOG00000020672	RBM42	81	98.498	ENSPTIG00000019270	RBM42	97	75.814	Panthera_tigris_altaica
ENSPCOG00000020672	RBM42	81	99.099	ENSPTRG00000010852	RBM42	97	75.870	Pan_troglodytes
ENSPCOG00000020672	RBM42	81	98.799	ENSPANG00000017032	RBM42	97	80.387	Papio_anubis
ENSPCOG00000020672	RBM42	81	99.399	ENSPEMG00000012065	Rbm42	70	99.399	Peromyscus_maniculatus_bairdii
ENSPCOG00000020672	RBM42	81	98.507	ENSPPYG00000009871	RBM42	69	98.507	Pongo_abelii
ENSPCOG00000020672	RBM42	81	96.084	ENSPCAG00000013053	RBM42	69	93.373	Procavia_capensis
ENSPCOG00000020672	RBM42	81	98.799	ENSPVAG00000012815	RBM42	70	98.799	Pteropus_vampyrus
ENSPCOG00000020672	RBM42	81	99.099	ENSRNOG00000024278	Rbm42	70	99.099	Rattus_norvegicus
ENSPCOG00000020672	RBM42	81	98.799	ENSRBIG00000007566	RBM42	97	75.638	Rhinopithecus_bieti
ENSPCOG00000020672	RBM42	81	98.799	ENSRROG00000042313	RBM42	97	76.047	Rhinopithecus_roxellana
ENSPCOG00000020672	RBM42	81	99.099	ENSSBOG00000030666	RBM42	82	99.099	Saimiri_boliviensis_boliviensis
ENSPCOG00000020672	RBM42	81	98.498	ENSSARG00000010724	RBM42	69	98.498	Sorex_araneus
ENSPCOG00000020672	RBM42	81	97.898	ENSSSCG00000002905	RBM42	97	75.581	Sus_scrofa
ENSPCOG00000020672	RBM42	81	99.099	ENSUAMG00000020711	RBM42	70	99.099	Ursus_americanus
ENSPCOG00000020672	RBM42	81	99.099	ENSUMAG00000020223	RBM42	70	99.099	Ursus_maritimus
ENSPCOG00000020672	RBM42	81	96.997	ENSVVUG00000015117	RBM42	69	98.701	Vulpes_vulpes