EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000020709 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor 38A pseudogene
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 907 bases
Position: chrKQ029504.1:4391066-4391972
Accession: 105826822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000017750	PRP38	PF03371.15	1.5e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000028389	-	888	-	ENSPCOP00000017750	295 (aa)	-	A0A2K6FUT1

Gene Model

Click here to download ENSPCOG00000020709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000020709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000020709	-	76	81.385	ENSPCOG00000016387	-	100	76.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000020709	-	76	81.385	ENSG00000134748	PRPF38A	100	76.923	Homo_sapiens
ENSPCOG00000020709	-	73	71.493	ENSAPOG00000011652	prpf38a	100	66.990	Acanthochromis_polyacanthus
ENSPCOG00000020709	-	76	81.385	ENSAMEG00000009319	PRPF38A	100	76.923	Ailuropoda_melanoleuca
ENSPCOG00000020709	-	73	70.588	ENSACIG00000012292	prpf38a	100	65.574	Amphilophus_citrinellus
ENSPCOG00000020709	-	73	71.493	ENSAOCG00000018004	prpf38a	100	66.990	Amphiprion_ocellaris
ENSPCOG00000020709	-	73	71.493	ENSAPEG00000021414	prpf38a	100	66.990	Amphiprion_percula
ENSPCOG00000020709	-	63	81.183	ENSATEG00000004608	prpf38a	100	67.419	Anabas_testudineus
ENSPCOG00000020709	-	54	78.916	ENSAPLG00000005827	PRPF38A	99	73.684	Anas_platyrhynchos
ENSPCOG00000020709	-	76	77.489	ENSACAG00000008249	PRPF38A	100	73.718	Anolis_carolinensis
ENSPCOG00000020709	-	100	55.161	ENSANAG00000029204	-	100	55.484	Aotus_nancymaae
ENSPCOG00000020709	-	76	81.385	ENSANAG00000027839	PRPF38A	100	76.923	Aotus_nancymaae
ENSPCOG00000020709	-	73	72.851	ENSACLG00000021595	prpf38a	100	65.696	Astatotilapia_calliptera
ENSPCOG00000020709	-	73	71.041	ENSAMXG00000029274	prpf38a	100	65.815	Astyanax_mexicanus
ENSPCOG00000020709	-	76	81.385	ENSBTAG00000002720	PRPF38A	100	76.923	Bos_taurus
ENSPCOG00000020709	-	63	57.219	WBGene00008380	prp-38	77	45.594	Caenorhabditis_elegans
ENSPCOG00000020709	-	76	81.659	ENSCJAG00000021594	PRPF38A	100	76.923	Callithrix_jacchus
ENSPCOG00000020709	-	76	81.385	ENSCAFG00000003740	PRPF38A	100	76.923	Canis_familiaris
ENSPCOG00000020709	-	76	81.385	ENSCAFG00020010939	PRPF38A	100	76.923	Canis_lupus_dingo
ENSPCOG00000020709	-	76	81.385	ENSCHIG00000024730	PRPF38A	100	76.923	Capra_hircus
ENSPCOG00000020709	-	76	81.385	ENSTSYG00000009868	-	100	76.923	Carlito_syrichta
ENSPCOG00000020709	-	62	79.787	ENSTSYG00000031994	-	95	74.721	Carlito_syrichta
ENSPCOG00000020709	-	100	76.129	ENSCPOG00000005079	PRPF38A	100	76.923	Cavia_porcellus
ENSPCOG00000020709	-	76	81.385	ENSCCAG00000026502	PRPF38A	100	74.598	Cebus_capucinus
ENSPCOG00000020709	-	95	49.123	ENSCATG00000044190	-	100	52.614	Cercocebus_atys
ENSPCOG00000020709	-	76	81.385	ENSCATG00000032296	PRPF38A	100	76.923	Cercocebus_atys
ENSPCOG00000020709	-	76	81.385	ENSCLAG00000005816	PRPF38A	100	76.923	Chinchilla_lanigera
ENSPCOG00000020709	-	76	81.250	ENSCHOG00000008388	PRPF38A	77	81.250	Choloepus_hoffmanni
ENSPCOG00000020709	-	76	79.221	ENSCPBG00000014791	PRPF38A	100	75.000	Chrysemys_picta_bellii
ENSPCOG00000020709	-	68	64.500	ENSCSAVG00000009580	-	88	52.381	Ciona_savignyi
ENSPCOG00000020709	-	76	81.385	ENSCANG00000032608	PRPF38A	94	77.500	Colobus_angolensis_palliatus
ENSPCOG00000020709	-	76	70.563	ENSCGRG00001002557	-	91	68.421	Cricetulus_griseus_chok1gshd
ENSPCOG00000020709	-	76	80.952	ENSCGRG00001018502	-	100	76.603	Cricetulus_griseus_chok1gshd
ENSPCOG00000020709	-	76	80.952	ENSCGRG00000014868	Prpf38a	100	76.603	Cricetulus_griseus_crigri
ENSPCOG00000020709	-	73	71.041	ENSCSEG00000001269	prpf38a	94	69.565	Cynoglossus_semilaevis
ENSPCOG00000020709	-	73	75.113	ENSCVAG00000012305	prpf38a	100	67.314	Cyprinodon_variegatus
ENSPCOG00000020709	-	73	74.208	ENSDARG00000039213	prpf38a	100	65.815	Danio_rerio
ENSPCOG00000020709	-	76	81.385	ENSDNOG00000042326	PRPF38A	100	76.923	Dasypus_novemcinctus
ENSPCOG00000020709	-	86	69.380	ENSDORG00000025371	-	97	68.248	Dipodomys_ordii
ENSPCOG00000020709	-	76	65.801	ENSDORG00000023857	-	100	65.385	Dipodomys_ordii
ENSPCOG00000020709	-	86	69.380	ENSDORG00000023691	-	97	68.248	Dipodomys_ordii
ENSPCOG00000020709	-	67	64.975	FBgn0050342	Prp38	57	65.426	Drosophila_melanogaster
ENSPCOG00000020709	-	78	67.227	ENSEBUG00000012588	prpf38a	90	66.312	Eptatretus_burgeri
ENSPCOG00000020709	-	76	81.385	ENSEASG00005014427	PRPF38A	100	76.923	Equus_asinus_asinus
ENSPCOG00000020709	-	76	81.385	ENSECAG00000022628	PRPF38A	100	76.923	Equus_caballus
ENSPCOG00000020709	-	73	74.208	ENSELUG00000021094	prpf38a	100	66.990	Esox_lucius
ENSPCOG00000020709	-	76	81.385	ENSFCAG00000002518	PRPF38A	100	76.923	Felis_catus
ENSPCOG00000020709	-	99	69.667	ENSFALG00000003612	-	99	67.333	Ficedula_albicollis
ENSPCOG00000020709	-	62	76.842	ENSFALG00000005598	-	100	72.694	Ficedula_albicollis
ENSPCOG00000020709	-	100	76.699	ENSFDAG00000011287	PRPF38A	100	76.923	Fukomys_damarensis
ENSPCOG00000020709	-	64	79.255	ENSFHEG00000014317	prpf38a	94	70.397	Fundulus_heteroclitus
ENSPCOG00000020709	-	56	80.120	ENSGMOG00000011384	prpf38a	54	80.120	Gadus_morhua
ENSPCOG00000020709	-	76	78.788	ENSGALG00000010627	PRPF38A	100	74.679	Gallus_gallus
ENSPCOG00000020709	-	64	80.319	ENSGAFG00000012422	prpf38a	100	67.638	Gambusia_affinis
ENSPCOG00000020709	-	64	77.660	ENSGACG00000005423	prpf38a	100	65.916	Gasterosteus_aculeatus
ENSPCOG00000020709	-	76	79.654	ENSGAGG00000020547	PRPF38A	100	75.321	Gopherus_agassizii
ENSPCOG00000020709	-	76	81.385	ENSGGOG00000003940	PRPF38A	100	76.923	Gorilla_gorilla
ENSPCOG00000020709	-	64	77.778	ENSHBUG00000020572	prpf38a	80	77.660	Haplochromis_burtoni
ENSPCOG00000020709	-	100	68.525	ENSHGLG00000007918	-	100	70.492	Heterocephalus_glaber_female
ENSPCOG00000020709	-	76	81.385	ENSHGLG00000000475	PRPF38A	100	76.923	Heterocephalus_glaber_female
ENSPCOG00000020709	-	100	68.525	ENSHGLG00100003928	-	100	70.492	Heterocephalus_glaber_male
ENSPCOG00000020709	-	76	81.385	ENSHGLG00100008935	PRPF38A	100	76.923	Heterocephalus_glaber_male
ENSPCOG00000020709	-	70	72.642	ENSHCOG00000020781	prpf38a	84	60.662	Hippocampus_comes
ENSPCOG00000020709	-	76	70.690	ENSIPUG00000005757	prpf38a	91	69.149	Ictalurus_punctatus
ENSPCOG00000020709	-	76	81.385	ENSSTOG00000015610	PRPF38A	100	76.923	Ictidomys_tridecemlineatus
ENSPCOG00000020709	-	76	80.087	ENSJJAG00000015811	Prpf38a	100	75.641	Jaculus_jaculus
ENSPCOG00000020709	-	73	75.113	ENSKMAG00000006588	prpf38a	100	66.990	Kryptolebias_marmoratus
ENSPCOG00000020709	-	73	72.851	ENSLBEG00000020585	prpf38a	100	66.019	Labrus_bergylta
ENSPCOG00000020709	-	74	75.336	ENSLACG00000011495	PRPF38A	100	70.833	Latimeria_chalumnae
ENSPCOG00000020709	-	73	72.973	ENSLOCG00000006262	prpf38a	100	66.343	Lepisosteus_oculatus
ENSPCOG00000020709	-	76	81.385	ENSLAFG00000025862	PRPF38A	100	76.923	Loxodonta_africana
ENSPCOG00000020709	-	76	81.659	ENSMFAG00000039449	PRPF38A	100	76.923	Macaca_fascicularis
ENSPCOG00000020709	-	63	80.105	ENSMMUG00000014333	PRPF38A	98	75.368	Macaca_mulatta
ENSPCOG00000020709	-	95	49.474	ENSMNEG00000040242	-	100	52.941	Macaca_nemestrina
ENSPCOG00000020709	-	76	81.385	ENSMNEG00000031221	PRPF38A	100	76.923	Macaca_nemestrina
ENSPCOG00000020709	-	76	81.385	ENSMLEG00000041105	PRPF38A	100	76.923	Mandrillus_leucophaeus
ENSPCOG00000020709	-	73	71.041	ENSMAMG00000015431	prpf38a	100	66.990	Mastacembelus_armatus
ENSPCOG00000020709	-	73	72.851	ENSMZEG00005017838	prpf38a	100	65.696	Maylandia_zebra
ENSPCOG00000020709	-	76	78.788	ENSMGAG00000011176	PRPF38A	94	75.000	Meleagris_gallopavo
ENSPCOG00000020709	-	76	74.672	ENSMAUG00000018029	-	99	69.963	Mesocricetus_auratus
ENSPCOG00000020709	-	76	81.385	ENSMICG00000014193	PRPF38A	100	76.923	Microcebus_murinus
ENSPCOG00000020709	-	76	80.952	ENSMOCG00000013080	Prpf38a	100	76.603	Microtus_ochrogaster
ENSPCOG00000020709	-	74	72.889	ENSMMOG00000016972	prpf38a	100	66.558	Mola_mola
ENSPCOG00000020709	-	76	80.603	ENSMODG00000000644	PRPF38A	100	76.038	Monodelphis_domestica
ENSPCOG00000020709	-	73	71.041	ENSMALG00000019363	prpf38a	97	67.314	Monopterus_albus
ENSPCOG00000020709	-	76	79.654	MGP_CAROLIEiJ_G0026269	Prpf38a	100	75.641	Mus_caroli
ENSPCOG00000020709	-	76	79.654	ENSMUSG00000063800	Prpf38a	100	75.641	Mus_musculus
ENSPCOG00000020709	-	76	79.654	MGP_PahariEiJ_G0028602	Prpf38a	100	75.641	Mus_pahari
ENSPCOG00000020709	-	76	79.654	MGP_SPRETEiJ_G0027238	Prpf38a	93	82.979	Mus_spretus
ENSPCOG00000020709	-	76	81.385	ENSMPUG00000006896	PRPF38A	100	76.923	Mustela_putorius_furo
ENSPCOG00000020709	-	100	76.547	ENSNGAG00000011884	Prpf38a	100	76.873	Nannospalax_galili
ENSPCOG00000020709	-	73	71.946	ENSNBRG00000004013	prpf38a	98	65.033	Neolamprologus_brichardi
ENSPCOG00000020709	-	68	81.250	ENSNLEG00000017999	PRPF38A	93	76.471	Nomascus_leucogenys
ENSPCOG00000020709	-	100	56.026	ENSNLEG00000012592	-	100	57.003	Nomascus_leucogenys
ENSPCOG00000020709	-	95	48.797	ENSNLEG00000033398	-	94	48.077	Nomascus_leucogenys
ENSPCOG00000020709	-	76	77.489	ENSMEUG00000003860	PRPF38A	100	73.397	Notamacropus_eugenii
ENSPCOG00000020709	-	76	81.223	ENSOPRG00000008985	PRPF38A	98	80.508	Ochotona_princeps
ENSPCOG00000020709	-	76	81.385	ENSODEG00000005869	PRPF38A	100	76.923	Octodon_degus
ENSPCOG00000020709	-	73	73.303	ENSONIG00000007816	prpf38a	100	66.019	Oreochromis_niloticus
ENSPCOG00000020709	-	100	43.675	ENSOANG00000009541	-	100	49.045	Ornithorhynchus_anatinus
ENSPCOG00000020709	-	76	81.385	ENSOCUG00000000963	PRPF38A	100	76.923	Oryctolagus_cuniculus
ENSPCOG00000020709	-	73	71.946	ENSORLG00000013485	prpf38a	99	68.182	Oryzias_latipes
ENSPCOG00000020709	-	73	71.946	ENSORLG00020002130	prpf38a	99	67.857	Oryzias_latipes_hni
ENSPCOG00000020709	-	73	71.946	ENSORLG00015021393	prpf38a	99	67.532	Oryzias_latipes_hsok
ENSPCOG00000020709	-	73	71.493	ENSOMEG00000016333	prpf38a	100	67.314	Oryzias_melastigma
ENSPCOG00000020709	-	76	81.385	ENSOGAG00000005423	PRPF38A	100	76.923	Otolemur_garnettii
ENSPCOG00000020709	-	76	81.385	ENSOARG00000005373	PRPF38A	100	76.923	Ovis_aries
ENSPCOG00000020709	-	95	59.794	ENSPPAG00000033867	-	100	60.131	Pan_paniscus
ENSPCOG00000020709	-	76	81.385	ENSPPAG00000030905	PRPF38A	100	76.923	Pan_paniscus
ENSPCOG00000020709	-	76	81.385	ENSPPRG00000013268	PRPF38A	100	76.923	Panthera_pardus
ENSPCOG00000020709	-	76	81.385	ENSPTIG00000015419	PRPF38A	100	76.923	Panthera_tigris_altaica
ENSPCOG00000020709	-	76	81.659	ENSPTRG00000000739	PRPF38A	100	76.923	Pan_troglodytes
ENSPCOG00000020709	-	76	81.385	ENSPANG00000015483	PRPF38A	100	76.923	Papio_anubis
ENSPCOG00000020709	-	73	72.851	ENSPKIG00000011439	prpf38a	100	65.909	Paramormyrops_kingsleyae
ENSPCOG00000020709	-	76	79.221	ENSPSIG00000017487	PRPF38A	100	75.321	Pelodiscus_sinensis
ENSPCOG00000020709	-	72	74.654	ENSPMGG00000021352	prpf38a	99	65.333	Periophthalmus_magnuspinnatus
ENSPCOG00000020709	-	100	70.159	ENSPEMG00000011212	-	100	69.841	Peromyscus_maniculatus_bairdii
ENSPCOG00000020709	-	76	80.952	ENSPEMG00000023277	-	100	76.603	Peromyscus_maniculatus_bairdii
ENSPCOG00000020709	-	76	80.603	ENSPCIG00000022369	-	100	76.038	Phascolarctos_cinereus
ENSPCOG00000020709	-	64	80.319	ENSPFOG00000004248	prpf38a	100	67.638	Poecilia_formosa
ENSPCOG00000020709	-	64	80.319	ENSPLAG00000010328	prpf38a	100	67.638	Poecilia_latipinna
ENSPCOG00000020709	-	64	80.319	ENSPMEG00000011804	prpf38a	100	67.638	Poecilia_mexicana
ENSPCOG00000020709	-	64	79.787	ENSPREG00000002835	prpf38a	87	62.162	Poecilia_reticulata
ENSPCOG00000020709	-	76	71.610	ENSPPYG00000001348	PRPF38A	100	69.716	Pongo_abelii
ENSPCOG00000020709	-	76	80.519	ENSPCAG00000013328	PRPF38A	100	76.282	Procavia_capensis
ENSPCOG00000020709	-	76	81.385	ENSPVAG00000009803	PRPF38A	100	76.923	Pteropus_vampyrus
ENSPCOG00000020709	-	73	72.851	ENSPNYG00000005571	prpf38a	100	65.696	Pundamilia_nyererei
ENSPCOG00000020709	-	73	72.398	ENSPNAG00000010399	prpf38a	100	66.134	Pygocentrus_nattereri
ENSPCOG00000020709	-	76	80.519	ENSRNOG00000009451	Prpf38a	100	76.282	Rattus_norvegicus
ENSPCOG00000020709	-	76	81.385	ENSRBIG00000036442	PRPF38A	100	76.923	Rhinopithecus_bieti
ENSPCOG00000020709	-	100	50.641	ENSRROG00000034606	-	100	49.020	Rhinopithecus_roxellana
ENSPCOG00000020709	-	98	64.667	ENSRROG00000040003	-	90	64.964	Rhinopithecus_roxellana
ENSPCOG00000020709	-	76	81.385	ENSRROG00000032788	PRPF38A	100	76.923	Rhinopithecus_roxellana
ENSPCOG00000020709	-	76	81.385	ENSSBOG00000019515	PRPF38A	100	76.923	Saimiri_boliviensis_boliviensis
ENSPCOG00000020709	-	62	79.474	ENSSHAG00000006906	-	100	74.539	Sarcophilus_harrisii
ENSPCOG00000020709	-	82	63.454	ENSSHAG00000006029	-	87	60.949	Sarcophilus_harrisii
ENSPCOG00000020709	-	64	78.191	ENSSFOG00015013572	prpf38a	100	64.194	Scleropages_formosus
ENSPCOG00000020709	-	73	71.493	ENSSMAG00000015379	prpf38a	99	66.775	Scophthalmus_maximus
ENSPCOG00000020709	-	73	71.946	ENSSDUG00000001324	prpf38a	100	67.638	Seriola_dumerili
ENSPCOG00000020709	-	73	71.946	ENSSLDG00000014803	prpf38a	100	67.638	Seriola_lalandi_dorsalis
ENSPCOG00000020709	-	76	61.905	ENSSARG00000014458	PRPF38A	100	62.500	Sorex_araneus
ENSPCOG00000020709	-	76	78.788	ENSSPUG00000013259	PRPF38A	100	74.679	Sphenodon_punctatus
ENSPCOG00000020709	-	73	55.204	ENSSPAG00000010449	prpf38a	100	55.195	Stegastes_partitus
ENSPCOG00000020709	-	76	81.385	ENSSSCG00000028288	PRPF38A	100	76.923	Sus_scrofa
ENSPCOG00000020709	-	76	74.459	ENSTGUG00000008995	PRPF38A	100	71.474	Taeniopygia_guttata
ENSPCOG00000020709	-	73	71.493	ENSTRUG00000003374	prpf38a	80	69.732	Takifugu_rubripes
ENSPCOG00000020709	-	73	69.955	ENSTNIG00000005533	prpf38a	100	66.238	Tetraodon_nigroviridis
ENSPCOG00000020709	-	76	81.385	ENSTBEG00000000725	PRPF38A	100	76.603	Tupaia_belangeri
ENSPCOG00000020709	-	76	81.385	ENSTTRG00000016139	PRPF38A	100	76.923	Tursiops_truncatus
ENSPCOG00000020709	-	76	81.385	ENSUAMG00000000625	PRPF38A	100	76.923	Ursus_americanus
ENSPCOG00000020709	-	76	81.385	ENSUMAG00000022674	PRPF38A	100	76.923	Ursus_maritimus
ENSPCOG00000020709	-	76	80.952	ENSVPAG00000000907	PRPF38A	100	72.756	Vicugna_pacos
ENSPCOG00000020709	-	76	81.385	ENSVVUG00000004475	PRPF38A	100	76.923	Vulpes_vulpes
ENSPCOG00000020709	-	73	75.000	ENSXETG00000008060	prpf38a	100	70.192	Xenopus_tropicalis
ENSPCOG00000020709	-	64	78.421	ENSXCOG00000007393	prpf38a	100	65.902	Xiphophorus_couchianus
ENSPCOG00000020709	-	64	80.319	ENSXMAG00000026143	prpf38a	100	67.638	Xiphophorus_maculatus