EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000020952 (Gene tree)
Gene ID: 105819441
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 25344 bases
Position: chrKQ024647.1:1650410-1675753
Accession: 105819441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000018201	ResIII	PF04851.15	1.2e-07	1	1
ENSPCOP00000018202	ResIII	PF04851.15	1.2e-07	1	1
ENSPCOP00000018200	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000028842	CHD3-202	6021	XM_012655683	ENSPCOP00000018201	2006 (aa)	XP_012511137	A0A2K6FW20
ENSPCOT00000028843	CHD3-203	5991	XM_012655681	ENSPCOP00000018202	1996 (aa)	XP_012511135	A0A2K6FW42
ENSPCOT00000028841	CHD3-201	7342	XM_012655680	ENSPCOP00000018200	2054 (aa)	XP_012511134	A0A2K6FW53

Gene Model

Click here to download ENSPCOG00000020952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000020952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000020952	CHD3	92	68.812	ENSPCOG00000022930	CHD5	97	68.554
ENSPCOG00000020952	CHD3	89	70.831	ENSPCOG00000018635	-	96	70.160

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000020952	CHD3	100	98.979	ENSG00000170004	CHD3	100	98.302	Homo_sapiens
ENSPCOG00000020952	CHD3	83	76.569	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSPCOG00000020952	CHD3	68	97.070	ENSAMEG00000003025	-	100	97.141	Ailuropoda_melanoleuca
ENSPCOG00000020952	CHD3	80	87.791	ENSACIG00000019671	chd3	98	87.791	Amphilophus_citrinellus
ENSPCOG00000020952	CHD3	89	80.412	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSPCOG00000020952	CHD3	89	80.069	ENSAPEG00000006341	chd3	95	77.599	Amphiprion_percula
ENSPCOG00000020952	CHD3	97	73.161	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSPCOG00000020952	CHD3	97	85.105	ENSACAG00000004276	CHD3	95	84.623	Anolis_carolinensis
ENSPCOG00000020952	CHD3	100	95.618	ENSANAG00000034323	CHD3	99	98.775	Aotus_nancymaae
ENSPCOG00000020952	CHD3	88	80.707	ENSACLG00000009222	chd3	99	74.817	Astatotilapia_calliptera
ENSPCOG00000020952	CHD3	100	97.714	ENSBTAG00000014377	CHD3	99	97.714	Bos_taurus
ENSPCOG00000020952	CHD3	100	98.832	ENSCJAG00000014766	CHD3	99	98.832	Callithrix_jacchus
ENSPCOG00000020952	CHD3	100	97.101	ENSCAFG00000016859	CHD3	100	97.101	Canis_familiaris
ENSPCOG00000020952	CHD3	94	97.870	ENSCAFG00020007422	CHD3	100	98.036	Canis_lupus_dingo
ENSPCOG00000020952	CHD3	99	98.072	ENSCHIG00000016737	CHD3	99	98.171	Capra_hircus
ENSPCOG00000020952	CHD3	100	98.102	ENSTSYG00000035658	CHD3	100	98.102	Carlito_syrichta
ENSPCOG00000020952	CHD3	99	94.483	ENSCAPG00000014864	CHD3	99	94.483	Cavia_aperea
ENSPCOG00000020952	CHD3	99	96.991	ENSCPOG00000022653	CHD3	99	96.991	Cavia_porcellus
ENSPCOG00000020952	CHD3	100	98.687	ENSCCAG00000034792	CHD3	100	98.002	Cebus_capucinus
ENSPCOG00000020952	CHD3	100	98.930	ENSCATG00000041717	CHD3	100	98.302	Cercocebus_atys
ENSPCOG00000020952	CHD3	99	98.171	ENSCLAG00000010523	CHD3	100	98.293	Chinchilla_lanigera
ENSPCOG00000020952	CHD3	99	98.680	ENSCSAG00000011122	CHD3	99	98.730	Chlorocebus_sabaeus
ENSPCOG00000020952	CHD3	89	83.595	ENSCPBG00000011966	CHD3	99	87.926	Chrysemys_picta_bellii
ENSPCOG00000020952	CHD3	100	98.152	ENSCANG00000037641	CHD3	100	98.152	Colobus_angolensis_palliatus
ENSPCOG00000020952	CHD3	99	97.207	ENSCGRG00001011306	Chd3	100	97.466	Cricetulus_griseus_chok1gshd
ENSPCOG00000020952	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSPCOG00000020952	CHD3	86	85.776	ENSCSEG00000004489	chd3	99	76.288	Cynoglossus_semilaevis
ENSPCOG00000020952	CHD3	86	82.661	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSPCOG00000020952	CHD3	88	82.215	ENSDARG00000021405	chd3	99	76.527	Danio_rerio
ENSPCOG00000020952	CHD3	99	83.612	ENSDNOG00000047846	CHD3	98	83.055	Dasypus_novemcinctus
ENSPCOG00000020952	CHD3	99	97.612	ENSDORG00000010713	Chd3	100	97.827	Dipodomys_ordii
ENSPCOG00000020952	CHD3	97	91.909	ENSETEG00000017733	CHD3	100	91.956	Echinops_telfairi
ENSPCOG00000020952	CHD3	54	78.193	ENSEBUG00000008310	chd3	99	70.708	Eptatretus_burgeri
ENSPCOG00000020952	CHD3	92	98.255	ENSEASG00005019360	CHD3	100	98.309	Equus_asinus_asinus
ENSPCOG00000020952	CHD3	92	98.310	ENSECAG00000010051	CHD3	100	98.363	Equus_caballus
ENSPCOG00000020952	CHD3	91	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSPCOG00000020952	CHD3	82	76.572	ENSELUG00000019499	chd3	99	77.381	Esox_lucius
ENSPCOG00000020952	CHD3	100	97.763	ENSFCAG00000009629	CHD3	99	97.763	Felis_catus
ENSPCOG00000020952	CHD3	99	94.962	ENSFDAG00000008220	CHD3	99	95.783	Fukomys_damarensis
ENSPCOG00000020952	CHD3	87	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSPCOG00000020952	CHD3	58	74.915	ENSGAFG00000004055	chd3	99	76.581	Gambusia_affinis
ENSPCOG00000020952	CHD3	97	70.755	ENSGACG00000019275	chd3	100	70.926	Gasterosteus_aculeatus
ENSPCOG00000020952	CHD3	75	86.106	ENSGAGG00000013164	CHD3	98	87.373	Gopherus_agassizii
ENSPCOG00000020952	CHD3	100	98.152	ENSGGOG00000013496	CHD3	100	98.152	Gorilla_gorilla
ENSPCOG00000020952	CHD3	100	97.611	ENSHGLG00000012017	CHD3	100	98.050	Heterocephalus_glaber_female
ENSPCOG00000020952	CHD3	88	91.027	ENSHGLG00100013902	CHD3	99	91.159	Heterocephalus_glaber_male
ENSPCOG00000020952	CHD3	93	72.976	ENSHCOG00000010170	chd3	96	73.574	Hippocampus_comes
ENSPCOG00000020952	CHD3	85	78.738	ENSIPUG00000003271	chd3	96	80.989	Ictalurus_punctatus
ENSPCOG00000020952	CHD3	99	98.578	ENSSTOG00000025907	CHD3	100	98.655	Ictidomys_tridecemlineatus
ENSPCOG00000020952	CHD3	100	96.296	ENSJJAG00000017633	Chd3	100	97.310	Jaculus_jaculus
ENSPCOG00000020952	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	75.590	Kryptolebias_marmoratus
ENSPCOG00000020952	CHD3	93	70.250	ENSLBEG00000028485	chd3	94	71.527	Labrus_bergylta
ENSPCOG00000020952	CHD3	95	73.981	ENSLACG00000008031	CHD3	99	74.623	Latimeria_chalumnae
ENSPCOG00000020952	CHD3	97	76.935	ENSLOCG00000013965	chd3	97	77.123	Lepisosteus_oculatus
ENSPCOG00000020952	CHD3	95	94.174	ENSLAFG00000000572	CHD3	100	94.224	Loxodonta_africana
ENSPCOG00000020952	CHD3	100	98.252	ENSMFAG00000020113	CHD3	100	98.252	Macaca_fascicularis
ENSPCOG00000020952	CHD3	100	95.904	ENSMMUG00000022221	CHD3	100	95.904	Macaca_mulatta
ENSPCOG00000020952	CHD3	100	98.252	ENSMNEG00000001728	CHD3	100	98.252	Macaca_nemestrina
ENSPCOG00000020952	CHD3	100	98.302	ENSMLEG00000032249	CHD3	100	98.302	Mandrillus_leucophaeus
ENSPCOG00000020952	CHD3	85	75.465	ENSMAMG00000000564	chd3	99	77.321	Mastacembelus_armatus
ENSPCOG00000020952	CHD3	99	96.753	ENSMAUG00000013873	Chd3	99	94.204	Mesocricetus_auratus
ENSPCOG00000020952	CHD3	100	99.611	ENSMICG00000008741	CHD3	99	99.611	Microcebus_murinus
ENSPCOG00000020952	CHD3	98	97.303	ENSMOCG00000004848	Chd3	100	97.564	Microtus_ochrogaster
ENSPCOG00000020952	CHD3	94	74.049	ENSMMOG00000012699	chd3	99	74.173	Mola_mola
ENSPCOG00000020952	CHD3	92	92.589	ENSMODG00000007509	CHD3	100	94.444	Monodelphis_domestica
ENSPCOG00000020952	CHD3	100	96.715	MGP_CAROLIEiJ_G0016564	Chd3	100	97.349	Mus_caroli
ENSPCOG00000020952	CHD3	100	96.864	ENSMUSG00000018474	Chd3	99	97.508	Mus_musculus
ENSPCOG00000020952	CHD3	100	96.864	MGP_PahariEiJ_G0017695	Chd3	100	97.560	Mus_pahari
ENSPCOG00000020952	CHD3	100	96.814	MGP_SPRETEiJ_G0017400	Chd3	100	97.508	Mus_spretus
ENSPCOG00000020952	CHD3	86	97.900	ENSMPUG00000008861	CHD3	100	97.900	Mustela_putorius_furo
ENSPCOG00000020952	CHD3	100	96.355	ENSMLUG00000014643	-	100	96.355	Myotis_lucifugus
ENSPCOG00000020952	CHD3	99	97.376	ENSNGAG00000000773	Chd3	99	97.376	Nannospalax_galili
ENSPCOG00000020952	CHD3	85	75.543	ENSNBRG00000000636	chd3	97	76.635	Neolamprologus_brichardi
ENSPCOG00000020952	CHD3	99	94.221	ENSNLEG00000009770	CHD3	100	95.693	Nomascus_leucogenys
ENSPCOG00000020952	CHD3	85	90.959	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSPCOG00000020952	CHD3	94	96.531	ENSOPRG00000011069	CHD3	100	96.583	Ochotona_princeps
ENSPCOG00000020952	CHD3	99	97.285	ENSODEG00000017785	CHD3	100	97.285	Octodon_degus
ENSPCOG00000020952	CHD3	95	74.974	ENSONIG00000009292	chd3	100	75.206	Oreochromis_niloticus
ENSPCOG00000020952	CHD3	98	93.438	ENSOCUG00000029299	CHD3	100	93.289	Oryctolagus_cuniculus
ENSPCOG00000020952	CHD3	82	70.705	ENSORLG00000007107	chd3	93	71.973	Oryzias_latipes
ENSPCOG00000020952	CHD3	57	73.016	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSPCOG00000020952	CHD3	69	80.385	ENSOMEG00000013691	chd3	99	78.380	Oryzias_melastigma
ENSPCOG00000020952	CHD3	99	98.629	ENSOGAG00000003216	CHD3	99	98.679	Otolemur_garnettii
ENSPCOG00000020952	CHD3	99	94.953	ENSOARG00000017855	CHD3	99	95.738	Ovis_aries
ENSPCOG00000020952	CHD3	100	95.963	ENSPPAG00000032886	CHD3	100	95.963	Pan_paniscus
ENSPCOG00000020952	CHD3	99	97.967	ENSPPRG00000000626	CHD3	100	97.726	Panthera_pardus
ENSPCOG00000020952	CHD3	100	99.075	ENSPTRG00000008714	CHD3	100	98.352	Pan_troglodytes
ENSPCOG00000020952	CHD3	100	98.302	ENSPANG00000023938	CHD3	100	98.302	Papio_anubis
ENSPCOG00000020952	CHD3	94	79.257	ENSPKIG00000006305	chd3	99	79.593	Paramormyrops_kingsleyae
ENSPCOG00000020952	CHD3	54	90.693	ENSPSIG00000010177	CHD3	98	90.967	Pelodiscus_sinensis
ENSPCOG00000020952	CHD3	99	97.156	ENSPEMG00000014262	Chd3	99	97.157	Peromyscus_maniculatus_bairdii
ENSPCOG00000020952	CHD3	99	92.444	ENSPCIG00000005442	CHD3	98	95.547	Phascolarctos_cinereus
ENSPCOG00000020952	CHD3	93	71.755	ENSPFOG00000012464	chd3	87	79.730	Poecilia_formosa
ENSPCOG00000020952	CHD3	86	83.871	ENSPLAG00000002887	chd3	96	83.871	Poecilia_latipinna
ENSPCOG00000020952	CHD3	53	81.490	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSPCOG00000020952	CHD3	89	84.133	ENSPREG00000011044	chd3	99	78.071	Poecilia_reticulata
ENSPCOG00000020952	CHD3	100	93.694	ENSPPYG00000007940	CHD3	98	95.907	Pongo_abelii
ENSPCOG00000020952	CHD3	95	97.577	ENSPCAG00000004350	CHD3	96	97.649	Procavia_capensis
ENSPCOG00000020952	CHD3	86	97.112	ENSPVAG00000016344	CHD3	87	97.260	Pteropus_vampyrus
ENSPCOG00000020952	CHD3	92	78.520	ENSPNAG00000020393	chd3	98	81.682	Pygocentrus_nattereri
ENSPCOG00000020952	CHD3	92	96.734	ENSRNOG00000009722	Chd3	100	96.786	Rattus_norvegicus
ENSPCOG00000020952	CHD3	100	95.067	ENSRBIG00000033562	CHD3	100	95.067	Rhinopithecus_bieti
ENSPCOG00000020952	CHD3	100	96.653	ENSRROG00000029554	CHD3	98	99.069	Rhinopithecus_roxellana
ENSPCOG00000020952	CHD3	100	98.102	ENSSBOG00000020719	CHD3	100	98.102	Saimiri_boliviensis_boliviensis
ENSPCOG00000020952	CHD3	98	92.963	ENSSHAG00000014412	CHD3	100	94.704	Sarcophilus_harrisii
ENSPCOG00000020952	CHD3	87	79.886	ENSSFOG00015023123	chd3	98	74.837	Scleropages_formosus
ENSPCOG00000020952	CHD3	79	91.304	ENSSMAG00000006451	chd3	94	87.209	Scophthalmus_maximus
ENSPCOG00000020952	CHD3	55	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSPCOG00000020952	CHD3	89	80.069	ENSSPAG00000013694	chd3	98	80.115	Stegastes_partitus
ENSPCOG00000020952	CHD3	99	98.024	ENSSSCG00000021363	CHD3	100	98.146	Sus_scrofa
ENSPCOG00000020952	CHD3	76	74.474	ENSTRUG00000014990	chd3	89	76.137	Takifugu_rubripes
ENSPCOG00000020952	CHD3	96	72.764	ENSTNIG00000012998	chd3	99	73.137	Tetraodon_nigroviridis
ENSPCOG00000020952	CHD3	63	97.608	ENSTBEG00000011454	-	71	97.608	Tupaia_belangeri
ENSPCOG00000020952	CHD3	98	98.765	ENSTTRG00000010295	CHD3	97	98.765	Tursiops_truncatus
ENSPCOG00000020952	CHD3	92	96.844	ENSUAMG00000005475	CHD3	99	96.897	Ursus_americanus
ENSPCOG00000020952	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSPCOG00000020952	CHD3	95	98.039	ENSVVUG00000028011	CHD3	99	97.922	Vulpes_vulpes
ENSPCOG00000020952	CHD3	97	72.709	ENSXETG00000012991	chd3	97	71.471	Xenopus_tropicalis
ENSPCOG00000020952	CHD3	51	83.089	ENSXCOG00000000809	chd3	96	83.202	Xiphophorus_couchianus
ENSPCOG00000020952	CHD3	78	86.705	ENSXMAG00000016035	chd3	99	86.705	Xiphophorus_maculatus