EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000021311 (Gene tree)
Gene ID: 105815697
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 27701 bases
Position: chrKQ023081.1:2811918-2839618
Accession: 105815697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000018816	PWI	PF01480.17	6.7e-30	1	1
ENSPCOP00000018815	PWI	PF01480.17	7.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000029461	SRRM1-202	2595	XM_012650919	ENSPCOP00000018816	864 (aa)	XP_012506373	A0A2K6FXW3
ENSPCOT00000029460	SRRM1-201	2742	XM_012650917	ENSPCOP00000018815	913 (aa)	XP_012506371	A0A2K6FXY3

Gene Model

Click here to download ENSPCOG00000021311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021311	SRRM1	100	98.468	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPCOG00000021311	SRRM1	100	98.031	ENSAMEG00000010075	SRRM1	100	98.031	Ailuropoda_melanoleuca
ENSPCOG00000021311	SRRM1	100	97.280	ENSANAG00000035606	SRRM1	100	97.280	Aotus_nancymaae
ENSPCOG00000021311	SRRM1	100	96.518	ENSBTAG00000013772	SRRM1	100	96.518	Bos_taurus
ENSPCOG00000021311	SRRM1	100	97.374	ENSCJAG00000020822	SRRM1	100	97.374	Callithrix_jacchus
ENSPCOG00000021311	SRRM1	100	97.803	ENSCAFG00020020948	SRRM1	100	97.803	Canis_lupus_dingo
ENSPCOG00000021311	SRRM1	100	93.697	ENSCHIG00000014656	SRRM1	100	93.697	Capra_hircus
ENSPCOG00000021311	SRRM1	100	98.031	ENSTSYG00000006782	SRRM1	100	98.031	Carlito_syrichta
ENSPCOG00000021311	SRRM1	99	93.969	ENSCAPG00000011473	SRRM1	100	93.969	Cavia_aperea
ENSPCOG00000021311	SRRM1	100	97.593	ENSCCAG00000029474	SRRM1	100	97.593	Cebus_capucinus
ENSPCOG00000021311	SRRM1	100	97.388	ENSCATG00000031303	SRRM1	100	97.388	Cercocebus_atys
ENSPCOG00000021311	SRRM1	100	96.083	ENSCLAG00000014592	SRRM1	100	96.083	Chinchilla_lanigera
ENSPCOG00000021311	SRRM1	72	98.592	ENSCHOG00000000027	SRRM1	71	98.592	Choloepus_hoffmanni
ENSPCOG00000021311	SRRM1	100	98.249	ENSCANG00000028271	SRRM1	100	98.249	Colobus_angolensis_palliatus
ENSPCOG00000021311	SRRM1	50	92.081	ENSDNOG00000049141	SRRM1	51	94.595	Dasypus_novemcinctus
ENSPCOG00000021311	SRRM1	100	96.627	ENSEASG00005004270	SRRM1	100	96.627	Equus_asinus_asinus
ENSPCOG00000021311	SRRM1	100	96.736	ENSECAG00000026981	SRRM1	100	96.736	Equus_caballus
ENSPCOG00000021311	SRRM1	100	98.031	ENSFCAG00000000678	-	100	98.031	Felis_catus
ENSPCOG00000021311	SRRM1	100	96.844	ENSFDAG00000009903	SRRM1	100	96.844	Fukomys_damarensis
ENSPCOG00000021311	SRRM1	100	98.359	ENSGGOG00000005209	SRRM1	100	98.359	Gorilla_gorilla
ENSPCOG00000021311	SRRM1	82	71.429	ENSHGLG00000013761	-	55	91.935	Heterocephalus_glaber_female
ENSPCOG00000021311	SRRM1	100	96.953	ENSHGLG00000017105	SRRM1	100	96.953	Heterocephalus_glaber_female
ENSPCOG00000021311	SRRM1	99	94.973	ENSHGLG00100016772	SRRM1	99	94.973	Heterocephalus_glaber_male
ENSPCOG00000021311	SRRM1	100	98.041	ENSSTOG00000014640	SRRM1	100	98.041	Ictidomys_tridecemlineatus
ENSPCOG00000021311	SRRM1	100	94.174	ENSLAFG00000013830	SRRM1	100	94.174	Loxodonta_africana
ENSPCOG00000021311	SRRM1	100	97.606	ENSMFAG00000025726	SRRM1	100	97.606	Macaca_fascicularis
ENSPCOG00000021311	SRRM1	99	97.268	ENSMMUG00000006645	SRRM1	99	97.268	Macaca_mulatta
ENSPCOG00000021311	SRRM1	100	97.497	ENSMNEG00000039415	SRRM1	100	97.497	Macaca_nemestrina
ENSPCOG00000021311	SRRM1	54	97.206	ENSMLEG00000038030	-	100	91.028	Mandrillus_leucophaeus
ENSPCOG00000021311	SRRM1	100	98.844	ENSMICG00000006553	SRRM1	100	98.844	Microcebus_murinus
ENSPCOG00000021311	SRRM1	100	98.468	ENSNLEG00000008966	SRRM1	100	98.468	Nomascus_leucogenys
ENSPCOG00000021311	SRRM1	72	95.000	ENSMEUG00000014704	SRRM1	70	94.737	Notamacropus_eugenii
ENSPCOG00000021311	SRRM1	100	96.838	ENSOCUG00000008438	SRRM1	100	96.838	Oryctolagus_cuniculus
ENSPCOG00000021311	SRRM1	100	97.171	ENSOGAG00000010210	SRRM1	100	97.171	Otolemur_garnettii
ENSPCOG00000021311	SRRM1	92	96.820	ENSOARG00000006453	SRRM1	99	96.820	Ovis_aries
ENSPCOG00000021311	SRRM1	100	98.359	ENSPPAG00000043918	SRRM1	100	98.359	Pan_paniscus
ENSPCOG00000021311	SRRM1	100	98.031	ENSPPRG00000002509	SRRM1	100	98.031	Panthera_pardus
ENSPCOG00000021311	SRRM1	100	94.337	ENSPTIG00000008778	-	100	94.337	Panthera_tigris_altaica
ENSPCOG00000021311	SRRM1	100	97.933	ENSPTRG00000000349	SRRM1	100	97.933	Pan_troglodytes
ENSPCOG00000021311	SRRM1	100	96.192	ENSPANG00000010194	SRRM1	100	96.192	Papio_anubis
ENSPCOG00000021311	SRRM1	52	88.285	ENSPCIG00000009214	SRRM1	60	84.061	Phascolarctos_cinereus
ENSPCOG00000021311	SRRM1	100	98.142	ENSPPYG00000001716	SRRM1	100	98.142	Pongo_abelii
ENSPCOG00000021311	SRRM1	58	98.446	ENSPCAG00000015138	SRRM1	54	94.822	Procavia_capensis
ENSPCOG00000021311	SRRM1	100	97.812	ENSPVAG00000005836	SRRM1	100	97.812	Pteropus_vampyrus
ENSPCOG00000021311	SRRM1	100	98.140	ENSRROG00000035151	SRRM1	100	98.140	Rhinopithecus_roxellana
ENSPCOG00000021311	SRRM1	100	96.499	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPCOG00000021311	SRRM1	58	94.426	ENSSARG00000013718	SRRM1	51	98.000	Sorex_araneus
ENSPCOG00000021311	SRRM1	99	97.149	ENSSSCG00000032947	SRRM1	100	97.045	Sus_scrofa
ENSPCOG00000021311	SRRM1	100	97.812	ENSTBEG00000000100	SRRM1	100	97.812	Tupaia_belangeri
ENSPCOG00000021311	SRRM1	99	97.133	ENSTTRG00000009365	SRRM1	100	97.133	Tursiops_truncatus
ENSPCOG00000021311	SRRM1	88	96.305	ENSUMAG00000013121	SRRM1	95	96.305	Ursus_maritimus
ENSPCOG00000021311	SRRM1	96	90.091	ENSVPAG00000007698	SRRM1	100	90.091	Vicugna_pacos
ENSPCOG00000021311	SRRM1	100	95.376	ENSVVUG00000026966	SRRM1	100	95.376	Vulpes_vulpes