EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000021451 (Gene tree)
Gene ID: 105824010
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 73613 bases
Position: chrKQ027134.1:95795-169407
Accession: 105824010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000019039	Ago_hook	PF10427.9	2.3e-22	1	1
ENSPCOP00000019038	Ago_hook	PF10427.9	2.7e-22	1	1
ENSPCOP00000019039	RRM_1	PF00076.22	0.00025	1	1
ENSPCOP00000019038	RRM_1	PF00076.22	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000029686	TNRC6C-202	7251	XM_012661341	ENSPCOP00000019039	1689 (aa)	XP_012516795	A0A2K6FYH9
ENSPCOT00000029685	TNRC6C-201	7359	XM_012661340	ENSPCOP00000019038	1725 (aa)	XP_012516794	A0A2K6FYH4

Gene Model

Click here to download ENSPCOG00000021451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000021451	TNRC6C	95	56.927	ENSPCOG00000010134	TNRC6A	83	51.399
ENSPCOG00000021451	TNRC6C	93	37.566	ENSPCOG00000020790	TNRC6B	81	40.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021451	TNRC6C	100	94.844	ENSG00000078687	TNRC6C	100	94.844	Homo_sapiens
ENSPCOG00000021451	TNRC6C	80	55.158	ENSAPOG00000019749	tnrc6c1	93	51.299	Acanthochromis_polyacanthus
ENSPCOG00000021451	TNRC6C	100	90.275	ENSAMEG00000013756	TNRC6C	96	90.160	Ailuropoda_melanoleuca
ENSPCOG00000021451	TNRC6C	94	49.671	ENSACIG00000008075	tnrc6c1	90	54.026	Amphilophus_citrinellus
ENSPCOG00000021451	TNRC6C	77	70.000	ENSAOCG00000023968	tnrc6c1	94	50.332	Amphiprion_ocellaris
ENSPCOG00000021451	TNRC6C	80	54.449	ENSAPEG00000009020	tnrc6c1	94	50.755	Amphiprion_percula
ENSPCOG00000021451	TNRC6C	100	87.450	ENSAPLG00000005456	TNRC6C	90	87.350	Anas_platyrhynchos
ENSPCOG00000021451	TNRC6C	100	88.079	ENSACAG00000016198	TNRC6C	88	88.021	Anolis_carolinensis
ENSPCOG00000021451	TNRC6C	100	94.139	ENSANAG00000021554	TNRC6C	100	94.435	Aotus_nancymaae
ENSPCOG00000021451	TNRC6C	100	49.530	ENSACLG00000000424	tnrc6c1	93	48.978	Astatotilapia_calliptera
ENSPCOG00000021451	TNRC6C	100	89.427	ENSBTAG00000018658	TNRC6C	100	89.722	Bos_taurus
ENSPCOG00000021451	TNRC6C	100	94.257	ENSCJAG00000019431	TNRC6C	100	94.257	Callithrix_jacchus
ENSPCOG00000021451	TNRC6C	100	92.357	ENSCAFG00000005224	TNRC6C	89	92.415	Canis_familiaris
ENSPCOG00000021451	TNRC6C	100	91.995	ENSCAFG00020006661	TNRC6C	100	91.307	Canis_lupus_dingo
ENSPCOG00000021451	TNRC6C	100	88.698	ENSCHIG00000026004	TNRC6C	100	87.294	Capra_hircus
ENSPCOG00000021451	TNRC6C	100	95.362	ENSTSYG00000005403	TNRC6C	100	95.362	Carlito_syrichta
ENSPCOG00000021451	TNRC6C	100	85.344	ENSCAPG00000007307	TNRC6C	89	85.504	Cavia_aperea
ENSPCOG00000021451	TNRC6C	100	90.764	ENSCPOG00000000467	TNRC6C	97	91.060	Cavia_porcellus
ENSPCOG00000021451	TNRC6C	100	94.725	ENSCCAG00000030524	TNRC6C	100	94.725	Cebus_capucinus
ENSPCOG00000021451	TNRC6C	100	94.783	ENSCATG00000033135	TNRC6C	100	94.783	Cercocebus_atys
ENSPCOG00000021451	TNRC6C	100	93.665	ENSCLAG00000011139	TNRC6C	89	93.665	Chinchilla_lanigera
ENSPCOG00000021451	TNRC6C	100	94.841	ENSCSAG00000005167	TNRC6C	89	94.841	Chlorocebus_sabaeus
ENSPCOG00000021451	TNRC6C	75	92.210	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSPCOG00000021451	TNRC6C	100	88.305	ENSCPBG00000027960	TNRC6C	100	88.482	Chrysemys_picta_bellii
ENSPCOG00000021451	TNRC6C	100	94.667	ENSCANG00000041771	TNRC6C	100	94.667	Colobus_angolensis_palliatus
ENSPCOG00000021451	TNRC6C	100	91.220	ENSCGRG00001022686	Tnrc6c	100	90.041	Cricetulus_griseus_chok1gshd
ENSPCOG00000021451	TNRC6C	100	91.652	ENSCGRG00000018041	Tnrc6c	100	90.041	Cricetulus_griseus_crigri
ENSPCOG00000021451	TNRC6C	100	48.033	ENSCSEG00000012744	tnrc6c1	90	48.614	Cynoglossus_semilaevis
ENSPCOG00000021451	TNRC6C	94	56.341	ENSDARG00000076847	tnrc6c1	96	55.595	Danio_rerio
ENSPCOG00000021451	TNRC6C	100	91.787	ENSDNOG00000003247	TNRC6C	91	91.845	Dasypus_novemcinctus
ENSPCOG00000021451	TNRC6C	100	87.110	ENSDORG00000004558	Tnrc6c	100	86.992	Dipodomys_ordii
ENSPCOG00000021451	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	87	83.217	Echinops_telfairi
ENSPCOG00000021451	TNRC6C	100	92.426	ENSEASG00005004799	TNRC6C	100	92.485	Equus_asinus_asinus
ENSPCOG00000021451	TNRC6C	100	92.526	ENSECAG00000012486	TNRC6C	90	92.485	Equus_caballus
ENSPCOG00000021451	TNRC6C	96	92.421	ENSEEUG00000010008	TNRC6C	93	92.421	Erinaceus_europaeus
ENSPCOG00000021451	TNRC6C	100	90.431	ENSFCAG00000028358	TNRC6C	100	90.490	Felis_catus
ENSPCOG00000021451	TNRC6C	100	87.578	ENSFALG00000000848	TNRC6C	100	86.897	Ficedula_albicollis
ENSPCOG00000021451	TNRC6C	100	92.422	ENSFDAG00000010368	TNRC6C	97	92.066	Fukomys_damarensis
ENSPCOG00000021451	TNRC6C	89	66.770	ENSFHEG00000002936	tnrc6c1	92	49.721	Fundulus_heteroclitus
ENSPCOG00000021451	TNRC6C	100	89.282	ENSGALG00000001725	TNRC6C	100	88.817	Gallus_gallus
ENSPCOG00000021451	TNRC6C	100	49.307	ENSGAFG00000019019	tnrc6c1	100	49.362	Gambusia_affinis
ENSPCOG00000021451	TNRC6C	80	53.923	ENSGACG00000012320	tnrc6c1	86	49.913	Gasterosteus_aculeatus
ENSPCOG00000021451	TNRC6C	100	87.977	ENSGAGG00000022043	TNRC6C	96	88.208	Gopherus_agassizii
ENSPCOG00000021451	TNRC6C	100	94.206	ENSGGOG00000011304	TNRC6C	100	94.148	Gorilla_gorilla
ENSPCOG00000021451	TNRC6C	100	49.638	ENSHBUG00000010846	tnrc6c1	100	48.255	Haplochromis_burtoni
ENSPCOG00000021451	TNRC6C	100	93.014	ENSHGLG00000004809	TNRC6C	89	93.014	Heterocephalus_glaber_female
ENSPCOG00000021451	TNRC6C	100	92.280	ENSHGLG00100012597	TNRC6C	89	92.339	Heterocephalus_glaber_male
ENSPCOG00000021451	TNRC6C	94	54.779	ENSIPUG00000000818	tnrc6c1	89	53.367	Ictalurus_punctatus
ENSPCOG00000021451	TNRC6C	100	91.780	ENSSTOG00000009101	TNRC6C	97	91.839	Ictidomys_tridecemlineatus
ENSPCOG00000021451	TNRC6C	100	89.747	ENSJJAG00000017055	Tnrc6c	89	89.452	Jaculus_jaculus
ENSPCOG00000021451	TNRC6C	94	50.722	ENSKMAG00000021023	tnrc6c1	97	50.857	Kryptolebias_marmoratus
ENSPCOG00000021451	TNRC6C	100	76.305	ENSLACG00000015283	TNRC6C	97	76.481	Latimeria_chalumnae
ENSPCOG00000021451	TNRC6C	99	57.366	ENSLOCG00000013377	tnrc6c1	87	58.385	Lepisosteus_oculatus
ENSPCOG00000021451	TNRC6C	100	91.397	ENSLAFG00000011122	TNRC6C	96	87.206	Loxodonta_africana
ENSPCOG00000021451	TNRC6C	100	94.899	ENSMFAG00000043943	TNRC6C	100	94.899	Macaca_fascicularis
ENSPCOG00000021451	TNRC6C	100	94.899	ENSMMUG00000011924	TNRC6C	100	94.790	Macaca_mulatta
ENSPCOG00000021451	TNRC6C	100	94.790	ENSMNEG00000030405	TNRC6C	100	94.790	Macaca_nemestrina
ENSPCOG00000021451	TNRC6C	100	94.841	ENSMLEG00000033436	TNRC6C	100	94.841	Mandrillus_leucophaeus
ENSPCOG00000021451	TNRC6C	94	55.045	ENSMAMG00000023613	tnrc6c1	100	50.668	Mastacembelus_armatus
ENSPCOG00000021451	TNRC6C	100	49.530	ENSMZEG00005010920	tnrc6c1	94	48.104	Maylandia_zebra
ENSPCOG00000021451	TNRC6C	100	80.813	ENSMGAG00000003906	TNRC6C	90	80.963	Meleagris_gallopavo
ENSPCOG00000021451	TNRC6C	100	90.748	ENSMAUG00000021618	Tnrc6c	100	90.689	Mesocricetus_auratus
ENSPCOG00000021451	TNRC6C	100	98.493	ENSMICG00000003952	TNRC6C	100	98.493	Microcebus_murinus
ENSPCOG00000021451	TNRC6C	100	92.836	ENSMOCG00000015879	Tnrc6c	97	92.777	Microtus_ochrogaster
ENSPCOG00000021451	TNRC6C	79	55.940	ENSMMOG00000005203	tnrc6c1	100	50.169	Mola_mola
ENSPCOG00000021451	TNRC6C	100	87.588	ENSMODG00000001785	TNRC6C	89	86.941	Monodelphis_domestica
ENSPCOG00000021451	TNRC6C	100	92.540	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	92.481	Mus_caroli
ENSPCOG00000021451	TNRC6C	100	92.126	ENSMUSG00000025571	Tnrc6c	97	92.066	Mus_musculus
ENSPCOG00000021451	TNRC6C	100	92.362	MGP_PahariEiJ_G0018593	Tnrc6c	97	92.303	Mus_pahari
ENSPCOG00000021451	TNRC6C	100	92.185	MGP_SPRETEiJ_G0018309	Tnrc6c	97	92.126	Mus_spretus
ENSPCOG00000021451	TNRC6C	100	89.809	ENSMPUG00000013348	TNRC6C	88	89.925	Mustela_putorius_furo
ENSPCOG00000021451	TNRC6C	100	83.210	ENSMLUG00000014431	TNRC6C	88	83.582	Myotis_lucifugus
ENSPCOG00000021451	TNRC6C	100	91.456	ENSNGAG00000012203	Tnrc6c	89	91.397	Nannospalax_galili
ENSPCOG00000021451	TNRC6C	100	50.139	ENSNBRG00000005344	tnrc6c1	94	49.750	Neolamprologus_brichardi
ENSPCOG00000021451	TNRC6C	100	91.979	ENSNLEG00000000047	TNRC6C	89	91.806	Nomascus_leucogenys
ENSPCOG00000021451	TNRC6C	97	82.061	ENSMEUG00000005104	TNRC6C	96	90.625	Notamacropus_eugenii
ENSPCOG00000021451	TNRC6C	100	92.895	ENSODEG00000012499	TNRC6C	100	93.073	Octodon_degus
ENSPCOG00000021451	TNRC6C	94	51.795	ENSONIG00000002210	tnrc6c1	100	51.136	Oreochromis_niloticus
ENSPCOG00000021451	TNRC6C	99	64.298	ENSOANG00000009758	-	84	66.584	Ornithorhynchus_anatinus
ENSPCOG00000021451	TNRC6C	84	81.442	ENSOCUG00000006122	TNRC6C	83	72.905	Oryctolagus_cuniculus
ENSPCOG00000021451	TNRC6C	91	49.969	ENSORLG00000009837	tnrc6c1	100	67.658	Oryzias_latipes
ENSPCOG00000021451	TNRC6C	92	50.000	ENSORLG00020016510	tnrc6c1	100	48.859	Oryzias_latipes_hni
ENSPCOG00000021451	TNRC6C	72	45.070	ENSORLG00015000171	tnrc6c1	98	44.229	Oryzias_latipes_hsok
ENSPCOG00000021451	TNRC6C	92	50.540	ENSOMEG00000000357	tnrc6c1	94	49.556	Oryzias_melastigma
ENSPCOG00000021451	TNRC6C	100	95.362	ENSOGAG00000007197	TNRC6C	100	95.014	Otolemur_garnettii
ENSPCOG00000021451	TNRC6C	96	85.896	ENSOARG00000006041	TNRC6C	87	86.072	Ovis_aries
ENSPCOG00000021451	TNRC6C	100	94.841	ENSPPAG00000027160	TNRC6C	100	94.841	Pan_paniscus
ENSPCOG00000021451	TNRC6C	100	90.431	ENSPPRG00000018881	TNRC6C	100	90.490	Panthera_pardus
ENSPCOG00000021451	TNRC6C	90	86.026	ENSPTIG00000008791	TNRC6C	69	76.194	Panthera_tigris_altaica
ENSPCOG00000021451	TNRC6C	100	94.841	ENSPTRG00000009699	TNRC6C	100	94.841	Pan_troglodytes
ENSPCOG00000021451	TNRC6C	100	94.612	ENSPANG00000019994	TNRC6C	100	94.612	Papio_anubis
ENSPCOG00000021451	TNRC6C	92	63.928	ENSPKIG00000005428	tnrc6c1	100	51.164	Paramormyrops_kingsleyae
ENSPCOG00000021451	TNRC6C	100	86.576	ENSPSIG00000018069	TNRC6C	97	86.280	Pelodiscus_sinensis
ENSPCOG00000021451	TNRC6C	74	57.928	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSPCOG00000021451	TNRC6C	100	91.868	ENSPEMG00000009785	Tnrc6c	100	88.568	Peromyscus_maniculatus_bairdii
ENSPCOG00000021451	TNRC6C	58	86.256	ENSPCIG00000017421	-	99	86.523	Phascolarctos_cinereus
ENSPCOG00000021451	TNRC6C	100	49.334	ENSPFOG00000012560	tnrc6c1	97	55.567	Poecilia_formosa
ENSPCOG00000021451	TNRC6C	100	50.309	ENSPLAG00000021055	tnrc6c1	97	50.961	Poecilia_latipinna
ENSPCOG00000021451	TNRC6C	100	95.072	ENSPPYG00000008679	TNRC6C	88	95.072	Pongo_abelii
ENSPCOG00000021451	TNRC6C	93	92.891	ENSPCAG00000012510	TNRC6C	91	92.891	Procavia_capensis
ENSPCOG00000021451	TNRC6C	96	89.593	ENSPVAG00000002008	TNRC6C	93	89.826	Pteropus_vampyrus
ENSPCOG00000021451	TNRC6C	100	49.140	ENSPNYG00000014477	tnrc6c1	100	48.093	Pundamilia_nyererei
ENSPCOG00000021451	TNRC6C	100	91.721	ENSRNOG00000022395	Tnrc6c	100	91.662	Rattus_norvegicus
ENSPCOG00000021451	TNRC6C	100	94.899	ENSRBIG00000027777	TNRC6C	100	94.899	Rhinopithecus_bieti
ENSPCOG00000021451	TNRC6C	100	94.957	ENSRROG00000042912	TNRC6C	100	94.957	Rhinopithecus_roxellana
ENSPCOG00000021451	TNRC6C	100	94.377	ENSSBOG00000023981	TNRC6C	100	94.377	Saimiri_boliviensis_boliviensis
ENSPCOG00000021451	TNRC6C	54	91.135	ENSSHAG00000018330	-	100	90.486	Sarcophilus_harrisii
ENSPCOG00000021451	TNRC6C	93	57.451	ENSSFOG00015006475	tnrc6c1	92	52.974	Scleropages_formosus
ENSPCOG00000021451	TNRC6C	69	56.917	ENSSFOG00015004735	-	99	61.518	Scleropages_formosus
ENSPCOG00000021451	TNRC6C	100	48.948	ENSSMAG00000012761	tnrc6c1	99	50.434	Scophthalmus_maximus
ENSPCOG00000021451	TNRC6C	94	51.648	ENSSDUG00000002366	tnrc6c1	93	51.484	Seriola_dumerili
ENSPCOG00000021451	TNRC6C	94	49.882	ENSSLDG00000025613	tnrc6c1	97	50.430	Seriola_lalandi_dorsalis
ENSPCOG00000021451	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	88	89.868	Sorex_araneus
ENSPCOG00000021451	TNRC6C	83	87.708	ENSSPUG00000007341	TNRC6C	91	87.153	Sphenodon_punctatus
ENSPCOG00000021451	TNRC6C	79	53.527	ENSSPAG00000014977	tnrc6c1	92	50.084	Stegastes_partitus
ENSPCOG00000021451	TNRC6C	97	91.180	ENSSSCG00000034373	TNRC6C	100	88.474	Sus_scrofa
ENSPCOG00000021451	TNRC6C	100	88.941	ENSTGUG00000007733	TNRC6C	97	88.823	Taeniopygia_guttata
ENSPCOG00000021451	TNRC6C	80	54.589	ENSTRUG00000011685	tnrc6c1	97	50.283	Takifugu_rubripes
ENSPCOG00000021451	TNRC6C	80	55.338	ENSTNIG00000005273	tnrc6c1	100	61.312	Tetraodon_nigroviridis
ENSPCOG00000021451	TNRC6C	64	91.016	ENSTBEG00000005046	TNRC6C	100	82.938	Tupaia_belangeri
ENSPCOG00000021451	TNRC6C	100	92.076	ENSTTRG00000010828	TNRC6C	97	92.135	Tursiops_truncatus
ENSPCOG00000021451	TNRC6C	100	90.155	ENSUMAG00000013614	TNRC6C	90	90.155	Ursus_maritimus
ENSPCOG00000021451	TNRC6C	52	82.460	ENSVPAG00000006765	-	99	82.474	Vicugna_pacos
ENSPCOG00000021451	TNRC6C	100	92.549	ENSVVUG00000015268	TNRC6C	100	92.608	Vulpes_vulpes
ENSPCOG00000021451	TNRC6C	100	75.382	ENSXETG00000019470	tnrc6c	100	75.044	Xenopus_tropicalis
ENSPCOG00000021451	TNRC6C	100	50.545	ENSXMAG00000025971	tnrc6c1	100	49.332	Xiphophorus_maculatus