EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000021564 (Gene tree)
Gene ID: 105814399
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 2413 bases
Position: chrKQ022624.1:2896434-2898846
Accession: 105814399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000019229	Exo_endo_phos	PF03372.23	5.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000029878	APEX1-202	45	-	ENSPCOP00000019230	14 (aa)	-	A0A2K6FZ22
ENSPCOT00000029877	APEX1-201	1304	XM_012649353	ENSPCOP00000019229	318 (aa)	XP_012504807	A0A2K6FZ11

Gene Model

Click here to download ENSPCOG00000021564's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021564's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021564	APEX1	100	95.283	ENSG00000100823	APEX1	100	95.283	Homo_sapiens
ENSPCOG00000021564	APEX1	88	69.176	ENSAPOG00000017002	apex1	98	66.221	Acanthochromis_polyacanthus
ENSPCOG00000021564	APEX1	100	97.170	ENSAMEG00000005418	APEX1	100	97.170	Ailuropoda_melanoleuca
ENSPCOG00000021564	APEX1	87	70.504	ENSACIG00000010653	apex1	97	69.550	Amphilophus_citrinellus
ENSPCOG00000021564	APEX1	88	68.817	ENSAOCG00000009649	apex1	99	64.557	Amphiprion_ocellaris
ENSPCOG00000021564	APEX1	88	68.817	ENSAPEG00000021453	apex1	99	64.557	Amphiprion_percula
ENSPCOG00000021564	APEX1	99	66.772	ENSATEG00000002883	apex1	97	67.405	Anabas_testudineus
ENSPCOG00000021564	APEX1	100	70.497	ENSACAG00000008099	APEX1	100	70.497	Anolis_carolinensis
ENSPCOG00000021564	APEX1	100	96.226	ENSANAG00000030117	APEX1	100	96.226	Aotus_nancymaae
ENSPCOG00000021564	APEX1	87	70.652	ENSACLG00000018441	apex1	99	65.615	Astatotilapia_calliptera
ENSPCOG00000021564	APEX1	100	65.938	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSPCOG00000021564	APEX1	100	95.597	ENSBTAG00000002745	APEX1	100	95.597	Bos_taurus
ENSPCOG00000021564	APEX1	80	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSPCOG00000021564	APEX1	100	96.226	ENSCJAG00000009726	APEX1	100	96.226	Callithrix_jacchus
ENSPCOG00000021564	APEX1	100	95.283	ENSCAFG00000032033	APEX1	100	95.283	Canis_familiaris
ENSPCOG00000021564	APEX1	54	91.279	ENSCAFG00020023002	-	96	91.279	Canis_lupus_dingo
ENSPCOG00000021564	APEX1	100	95.283	ENSCAFG00020014377	-	100	95.283	Canis_lupus_dingo
ENSPCOG00000021564	APEX1	98	75.962	ENSCHIG00000014537	-	99	75.962	Capra_hircus
ENSPCOG00000021564	APEX1	100	94.969	ENSCHIG00000007298	-	100	94.969	Capra_hircus
ENSPCOG00000021564	APEX1	100	95.597	ENSTSYG00000034813	APEX1	100	95.597	Carlito_syrichta
ENSPCOG00000021564	APEX1	85	88.930	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSPCOG00000021564	APEX1	100	95.283	ENSCPOG00000030909	APEX1	100	95.283	Cavia_porcellus
ENSPCOG00000021564	APEX1	100	96.226	ENSCCAG00000033056	-	100	96.226	Cebus_capucinus
ENSPCOG00000021564	APEX1	100	82.390	ENSCCAG00000031931	-	100	82.390	Cebus_capucinus
ENSPCOG00000021564	APEX1	100	95.283	ENSCATG00000015580	APEX1	100	95.283	Cercocebus_atys
ENSPCOG00000021564	APEX1	100	95.597	ENSCLAG00000001002	APEX1	100	95.597	Chinchilla_lanigera
ENSPCOG00000021564	APEX1	100	94.969	ENSCSAG00000016670	-	100	94.969	Chlorocebus_sabaeus
ENSPCOG00000021564	APEX1	100	94.969	ENSCSAG00000016685	-	100	94.969	Chlorocebus_sabaeus
ENSPCOG00000021564	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSPCOG00000021564	APEX1	91	54.915	ENSCING00000008137	-	94	54.915	Ciona_intestinalis
ENSPCOG00000021564	APEX1	90	48.000	ENSCSAVG00000007144	-	100	52.896	Ciona_savignyi
ENSPCOG00000021564	APEX1	100	95.283	ENSCANG00000030726	APEX1	100	95.283	Colobus_angolensis_palliatus
ENSPCOG00000021564	APEX1	100	91.509	ENSCGRG00001017046	Apex1	100	91.509	Cricetulus_griseus_chok1gshd
ENSPCOG00000021564	APEX1	100	91.509	ENSCGRG00000008984	Apex1	100	91.509	Cricetulus_griseus_crigri
ENSPCOG00000021564	APEX1	99	65.300	ENSCSEG00000017499	apex1	99	65.300	Cynoglossus_semilaevis
ENSPCOG00000021564	APEX1	88	70.968	ENSCVAG00000022075	apex1	99	65.823	Cyprinodon_variegatus
ENSPCOG00000021564	APEX1	100	65.723	ENSDARG00000045843	apex1	100	65.409	Danio_rerio
ENSPCOG00000021564	APEX1	100	91.509	ENSDNOG00000042234	APEX1	95	91.509	Dasypus_novemcinctus
ENSPCOG00000021564	APEX1	100	95.912	ENSDORG00000001616	Apex1	100	95.912	Dipodomys_ordii
ENSPCOG00000021564	APEX1	100	94.025	ENSETEG00000004855	-	100	94.025	Echinops_telfairi
ENSPCOG00000021564	APEX1	75	64.017	ENSEBUG00000000622	-	92	64.017	Eptatretus_burgeri
ENSPCOG00000021564	APEX1	100	97.799	ENSEASG00005017489	APEX1	74	97.799	Equus_asinus_asinus
ENSPCOG00000021564	APEX1	100	97.799	ENSECAG00000022325	APEX1	82	97.799	Equus_caballus
ENSPCOG00000021564	APEX1	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSPCOG00000021564	APEX1	100	64.465	ENSELUG00000021706	apex1	100	65.625	Esox_lucius
ENSPCOG00000021564	APEX1	100	97.170	ENSFCAG00000030869	APEX1	100	97.170	Felis_catus
ENSPCOG00000021564	APEX1	100	94.654	ENSFDAG00000006120	APEX1	100	94.654	Fukomys_damarensis
ENSPCOG00000021564	APEX1	99	67.089	ENSFHEG00000009031	apex1	83	67.089	Fundulus_heteroclitus
ENSPCOG00000021564	APEX1	99	61.442	ENSGMOG00000007943	apex1	99	61.442	Gadus_morhua
ENSPCOG00000021564	APEX1	99	67.405	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSPCOG00000021564	APEX1	99	64.557	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSPCOG00000021564	APEX1	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSPCOG00000021564	APEX1	100	95.597	ENSGGOG00000002128	APEX1	100	95.597	Gorilla_gorilla
ENSPCOG00000021564	APEX1	99	64.873	ENSHBUG00000005894	apex1	99	65.506	Haplochromis_burtoni
ENSPCOG00000021564	APEX1	100	95.597	ENSHGLG00000002848	APEX1	100	95.597	Heterocephalus_glaber_female
ENSPCOG00000021564	APEX1	100	95.597	ENSHGLG00100017878	APEX1	100	95.597	Heterocephalus_glaber_male
ENSPCOG00000021564	APEX1	99	65.723	ENSHCOG00000009961	apex1	99	65.723	Hippocampus_comes
ENSPCOG00000021564	APEX1	100	68.339	ENSIPUG00000005799	apex1	100	68.339	Ictalurus_punctatus
ENSPCOG00000021564	APEX1	100	95.597	ENSSTOG00000010096	APEX1	100	95.597	Ictidomys_tridecemlineatus
ENSPCOG00000021564	APEX1	100	85.220	ENSJJAG00000003660	-	100	85.220	Jaculus_jaculus
ENSPCOG00000021564	APEX1	100	94.969	ENSJJAG00000012067	-	100	94.969	Jaculus_jaculus
ENSPCOG00000021564	APEX1	100	81.761	ENSJJAG00000020465	-	96	85.906	Jaculus_jaculus
ENSPCOG00000021564	APEX1	88	70.968	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSPCOG00000021564	APEX1	99	63.291	ENSLBEG00000010248	apex1	99	63.291	Labrus_bergylta
ENSPCOG00000021564	APEX1	100	66.875	ENSLACG00000008617	APEX1	100	66.875	Latimeria_chalumnae
ENSPCOG00000021564	APEX1	100	65.217	ENSLOCG00000015516	apex1	99	65.217	Lepisosteus_oculatus
ENSPCOG00000021564	APEX1	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSPCOG00000021564	APEX1	100	95.283	ENSMFAG00000002565	APEX1	100	95.283	Macaca_fascicularis
ENSPCOG00000021564	APEX1	100	95.283	ENSMMUG00000048039	APEX1	100	95.283	Macaca_mulatta
ENSPCOG00000021564	APEX1	100	95.283	ENSMNEG00000036944	APEX1	100	95.283	Macaca_nemestrina
ENSPCOG00000021564	APEX1	100	95.283	ENSMLEG00000042125	APEX1	100	95.283	Mandrillus_leucophaeus
ENSPCOG00000021564	APEX1	88	70.968	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSPCOG00000021564	APEX1	87	70.652	ENSMZEG00005014187	apex1	99	65.615	Maylandia_zebra
ENSPCOG00000021564	APEX1	100	92.453	ENSMAUG00000013994	Apex1	100	92.453	Mesocricetus_auratus
ENSPCOG00000021564	APEX1	100	99.371	ENSMICG00000043554	APEX1	100	99.371	Microcebus_murinus
ENSPCOG00000021564	APEX1	100	92.453	ENSMOCG00000013721	Apex1	100	92.453	Microtus_ochrogaster
ENSPCOG00000021564	APEX1	88	67.143	ENSMMOG00000010031	apex1	97	63.009	Mola_mola
ENSPCOG00000021564	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	85.093	Monodelphis_domestica
ENSPCOG00000021564	APEX1	88	63.799	ENSMALG00000011699	apex1	79	62.457	Monopterus_albus
ENSPCOG00000021564	APEX1	99	94.637	MGP_CAROLIEiJ_G0019209	Apex1	99	94.637	Mus_caroli
ENSPCOG00000021564	APEX1	100	95.283	ENSMUSG00000035960	Apex1	100	95.283	Mus_musculus
ENSPCOG00000021564	APEX1	100	94.654	MGP_PahariEiJ_G0030232	Apex1	100	94.654	Mus_pahari
ENSPCOG00000021564	APEX1	100	95.283	MGP_SPRETEiJ_G0020101	Apex1	100	95.283	Mus_spretus
ENSPCOG00000021564	APEX1	100	95.312	ENSMLUG00000028957	APEX1	100	95.312	Myotis_lucifugus
ENSPCOG00000021564	APEX1	100	94.340	ENSNGAG00000002725	-	100	94.340	Nannospalax_galili
ENSPCOG00000021564	APEX1	100	70.755	ENSNGAG00000021748	-	99	70.755	Nannospalax_galili
ENSPCOG00000021564	APEX1	87	70.290	ENSNBRG00000005334	apex1	91	65.300	Neolamprologus_brichardi
ENSPCOG00000021564	APEX1	100	95.912	ENSNLEG00000010839	APEX1	100	95.912	Nomascus_leucogenys
ENSPCOG00000021564	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	86.478	Notamacropus_eugenii
ENSPCOG00000021564	APEX1	100	94.654	ENSOPRG00000014029	APEX1	100	94.654	Ochotona_princeps
ENSPCOG00000021564	APEX1	97	76.375	ENSODEG00000004777	-	99	76.375	Octodon_degus
ENSPCOG00000021564	APEX1	100	95.912	ENSODEG00000001703	-	100	95.912	Octodon_degus
ENSPCOG00000021564	APEX1	100	72.222	ENSODEG00000006583	-	100	72.222	Octodon_degus
ENSPCOG00000021564	APEX1	87	70.863	ENSONIG00000012089	apex1	99	65.931	Oreochromis_niloticus
ENSPCOG00000021564	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	78.395	Ornithorhynchus_anatinus
ENSPCOG00000021564	APEX1	100	95.597	ENSOCUG00000005022	APEX1	100	95.597	Oryctolagus_cuniculus
ENSPCOG00000021564	APEX1	99	66.667	ENSORLG00000012378	apex1	99	66.667	Oryzias_latipes
ENSPCOG00000021564	APEX1	99	66.667	ENSORLG00020021371	apex1	99	66.667	Oryzias_latipes_hni
ENSPCOG00000021564	APEX1	99	66.667	ENSORLG00015020089	apex1	99	66.667	Oryzias_latipes_hsok
ENSPCOG00000021564	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSPCOG00000021564	APEX1	100	97.484	ENSOGAG00000013335	-	100	97.484	Otolemur_garnettii
ENSPCOG00000021564	APEX1	98	86.538	ENSOGAG00000029355	-	100	86.538	Otolemur_garnettii
ENSPCOG00000021564	APEX1	97	91.234	ENSOARG00000001876	-	100	91.234	Ovis_aries
ENSPCOG00000021564	APEX1	99	80.063	ENSOARG00000014424	-	100	80.063	Ovis_aries
ENSPCOG00000021564	APEX1	100	94.025	ENSOARG00000019740	-	100	94.025	Ovis_aries
ENSPCOG00000021564	APEX1	100	95.597	ENSPPAG00000038760	APEX1	100	95.597	Pan_paniscus
ENSPCOG00000021564	APEX1	100	96.855	ENSPPRG00000011794	APEX1	100	96.855	Panthera_pardus
ENSPCOG00000021564	APEX1	100	97.170	ENSPTIG00000014829	APEX1	100	97.170	Panthera_tigris_altaica
ENSPCOG00000021564	APEX1	100	95.597	ENSPTRG00000006093	APEX1	100	95.597	Pan_troglodytes
ENSPCOG00000021564	APEX1	100	95.283	ENSPANG00000022757	APEX1	100	95.283	Papio_anubis
ENSPCOG00000021564	APEX1	87	68.592	ENSPKIG00000003504	apex1	100	64.174	Paramormyrops_kingsleyae
ENSPCOG00000021564	APEX1	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSPCOG00000021564	APEX1	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSPCOG00000021564	APEX1	94	65.000	ENSPMAG00000007275	-	99	65.000	Petromyzon_marinus
ENSPCOG00000021564	APEX1	100	83.386	ENSPCIG00000023274	APEX1	100	85.358	Phascolarctos_cinereus
ENSPCOG00000021564	APEX1	99	67.405	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSPCOG00000021564	APEX1	99	67.089	ENSPLAG00000012779	apex1	99	67.089	Poecilia_latipinna
ENSPCOG00000021564	APEX1	99	67.405	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSPCOG00000021564	APEX1	99	67.089	ENSPREG00000014298	apex1	99	67.089	Poecilia_reticulata
ENSPCOG00000021564	APEX1	100	95.283	ENSPPYG00000005565	APEX1	100	95.283	Pongo_abelii
ENSPCOG00000021564	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSPCOG00000021564	APEX1	100	95.625	ENSPVAG00000010736	APEX1	100	95.625	Pteropus_vampyrus
ENSPCOG00000021564	APEX1	87	70.652	ENSPNYG00000023940	apex1	99	65.615	Pundamilia_nyererei
ENSPCOG00000021564	APEX1	93	64.865	ENSPNAG00000020897	apex1	96	64.746	Pygocentrus_nattereri
ENSPCOG00000021564	APEX1	100	94.340	ENSRNOG00000009663	Apex1	100	94.340	Rattus_norvegicus
ENSPCOG00000021564	APEX1	100	95.283	ENSRBIG00000038325	APEX1	99	95.283	Rhinopithecus_bieti
ENSPCOG00000021564	APEX1	100	81.132	ENSSBOG00000031372	-	100	81.132	Saimiri_boliviensis_boliviensis
ENSPCOG00000021564	APEX1	100	95.912	ENSSBOG00000018921	-	100	95.912	Saimiri_boliviensis_boliviensis
ENSPCOG00000021564	APEX1	100	82.407	ENSSHAG00000013524	APEX1	100	83.436	Sarcophilus_harrisii
ENSPCOG00000021564	APEX1	100	62.264	ENSSFOG00015001948	apex1	100	61.950	Scleropages_formosus
ENSPCOG00000021564	APEX1	87	68.705	ENSSMAG00000013348	apex1	99	64.669	Scophthalmus_maximus
ENSPCOG00000021564	APEX1	99	64.873	ENSSDUG00000016377	apex1	99	64.873	Seriola_dumerili
ENSPCOG00000021564	APEX1	99	65.190	ENSSLDG00000023005	apex1	99	65.190	Seriola_lalandi_dorsalis
ENSPCOG00000021564	APEX1	90	72.982	ENSSPUG00000000531	APEX1	95	72.982	Sphenodon_punctatus
ENSPCOG00000021564	APEX1	99	64.557	ENSSPAG00000000458	apex1	96	67.577	Stegastes_partitus
ENSPCOG00000021564	APEX1	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSPCOG00000021564	APEX1	96	55.806	ENSSSCG00000039705	-	99	57.947	Sus_scrofa
ENSPCOG00000021564	APEX1	74	58.898	ENSTGUG00000014378	APEX1	100	58.898	Taeniopygia_guttata
ENSPCOG00000021564	APEX1	87	66.906	ENSTRUG00000004268	apex1	95	62.975	Takifugu_rubripes
ENSPCOG00000021564	APEX1	99	63.924	ENSTNIG00000005778	apex1	99	63.924	Tetraodon_nigroviridis
ENSPCOG00000021564	APEX1	100	92.138	ENSTBEG00000006405	APEX1	100	92.138	Tupaia_belangeri
ENSPCOG00000021564	APEX1	74	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSPCOG00000021564	APEX1	100	96.855	ENSUAMG00000010457	APEX1	100	96.855	Ursus_americanus
ENSPCOG00000021564	APEX1	100	96.855	ENSUMAG00000009178	APEX1	100	96.855	Ursus_maritimus
ENSPCOG00000021564	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSPCOG00000021564	APEX1	100	95.912	ENSVVUG00000009010	APEX1	100	95.912	Vulpes_vulpes
ENSPCOG00000021564	APEX1	100	67.188	ENSXETG00000024773	apex1	100	67.188	Xenopus_tropicalis
ENSPCOG00000021564	APEX1	88	72.043	ENSXCOG00000015233	apex1	99	67.089	Xiphophorus_couchianus
ENSPCOG00000021564	APEX1	88	72.043	ENSXMAG00000006195	apex1	99	67.089	Xiphophorus_maculatus