EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000021656 (Gene tree)
Gene ID: 105808536
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 118135 bases
Position: chrKQ021258.1:3251090-3369224
Accession: 105808536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000019428	Upf2	PF04050.14	9.5e-33	1	1
ENSPCOP00000019428	MIF4G	PF02854.19	1.7e-80	1	3
ENSPCOP00000019428	MIF4G	PF02854.19	1.7e-80	2	3
ENSPCOP00000019428	MIF4G	PF02854.19	1.7e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000030078	UPF2-201	3705	XM_012642199	ENSPCOP00000019428	1234 (aa)	XP_012497653	A0A2K6FZM0

Gene Model

Click here to download ENSPCOG00000021656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021656	UPF2	100	95.512	ENSG00000151461	UPF2	99	95.433	Homo_sapiens
ENSPCOG00000021656	UPF2	100	78.766	ENSAPOG00000015837	UPF2	100	78.926	Acanthochromis_polyacanthus
ENSPCOG00000021656	UPF2	100	95.193	ENSAMEG00000004586	UPF2	99	95.114	Ailuropoda_melanoleuca
ENSPCOG00000021656	UPF2	100	80.312	ENSACIG00000018078	UPF2	100	80.000	Amphilophus_citrinellus
ENSPCOG00000021656	UPF2	100	81.165	ENSAOCG00000016766	UPF2	100	81.405	Amphiprion_ocellaris
ENSPCOG00000021656	UPF2	100	81.245	ENSAPEG00000019084	UPF2	100	81.484	Amphiprion_percula
ENSPCOG00000021656	UPF2	100	80.140	ENSATEG00000021677	UPF2	99	80.109	Anabas_testudineus
ENSPCOG00000021656	UPF2	100	86.204	ENSAPLG00000010287	UPF2	90	90.909	Anas_platyrhynchos
ENSPCOG00000021656	UPF2	100	89.283	ENSACAG00000009259	UPF2	99	88.968	Anolis_carolinensis
ENSPCOG00000021656	UPF2	100	84.827	ENSANAG00000028451	UPF2	99	83.884	Aotus_nancymaae
ENSPCOG00000021656	UPF2	100	78.594	ENSACLG00000012696	UPF2	99	80.234	Astatotilapia_calliptera
ENSPCOG00000021656	UPF2	100	95.035	ENSBTAG00000000288	UPF2	99	94.957	Bos_taurus
ENSPCOG00000021656	UPF2	100	97.120	ENSCJAG00000020685	UPF2	99	97.120	Callithrix_jacchus
ENSPCOG00000021656	UPF2	100	95.035	ENSCAFG00000004839	UPF2	99	94.957	Canis_familiaris
ENSPCOG00000021656	UPF2	100	96.403	ENSCAFG00020005882	UPF2	100	96.403	Canis_lupus_dingo
ENSPCOG00000021656	UPF2	100	95.114	ENSCHIG00000020359	UPF2	99	95.035	Capra_hircus
ENSPCOG00000021656	UPF2	100	97.819	ENSTSYG00000000935	UPF2	100	97.819	Carlito_syrichta
ENSPCOG00000021656	UPF2	91	83.391	ENSCAPG00000016658	UPF2	95	83.219	Cavia_aperea
ENSPCOG00000021656	UPF2	99	90.801	ENSCPOG00000008809	UPF2	99	91.753	Cavia_porcellus
ENSPCOG00000021656	UPF2	100	87.728	ENSCCAG00000035991	UPF2	99	89.818	Cebus_capucinus
ENSPCOG00000021656	UPF2	100	96.434	ENSCATG00000032679	UPF2	100	96.434	Cercocebus_atys
ENSPCOG00000021656	UPF2	100	94.484	ENSCLAG00000011434	UPF2	99	94.405	Chinchilla_lanigera
ENSPCOG00000021656	UPF2	100	95.827	ENSCSAG00000013372	UPF2	99	95.748	Chlorocebus_sabaeus
ENSPCOG00000021656	UPF2	87	98.884	ENSCHOG00000000422	UPF2	83	100.000	Choloepus_hoffmanni
ENSPCOG00000021656	UPF2	100	90.590	ENSCPBG00000027823	UPF2	100	89.283	Chrysemys_picta_bellii
ENSPCOG00000021656	UPF2	100	93.112	ENSCANG00000040396	UPF2	100	93.191	Colobus_angolensis_palliatus
ENSPCOG00000021656	UPF2	100	94.953	ENSCGRG00001019347	Upf2	99	94.874	Cricetulus_griseus_chok1gshd
ENSPCOG00000021656	UPF2	100	94.953	ENSCGRG00000017993	Upf2	99	94.874	Cricetulus_griseus_crigri
ENSPCOG00000021656	UPF2	91	80.509	ENSCSEG00000003520	UPF2	80	80.556	Cynoglossus_semilaevis
ENSPCOG00000021656	UPF2	99	80.016	ENSCVAG00000006167	UPF2	100	79.386	Cyprinodon_variegatus
ENSPCOG00000021656	UPF2	100	94.957	ENSDNOG00000018160	UPF2	99	94.878	Dasypus_novemcinctus
ENSPCOG00000021656	UPF2	100	94.795	ENSDORG00000002478	Upf2	99	94.716	Dipodomys_ordii
ENSPCOG00000021656	UPF2	88	36.548	FBgn0029992	Upf2	95	36.023	Drosophila_melanogaster
ENSPCOG00000021656	UPF2	60	100.000	ENSETEG00000011583	-	53	100.000	Echinops_telfairi
ENSPCOG00000021656	UPF2	66	72.483	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSPCOG00000021656	UPF2	100	95.193	ENSEASG00005019274	UPF2	99	97.083	Equus_asinus_asinus
ENSPCOG00000021656	UPF2	100	95.272	ENSECAG00000017022	UPF2	99	95.193	Equus_caballus
ENSPCOG00000021656	UPF2	81	81.155	ENSEEUG00000007819	UPF2	82	81.994	Erinaceus_europaeus
ENSPCOG00000021656	UPF2	100	79.734	ENSELUG00000012014	UPF2	99	79.576	Esox_lucius
ENSPCOG00000021656	UPF2	100	99.435	ENSFCAG00000005785	UPF2	99	94.878	Felis_catus
ENSPCOG00000021656	UPF2	100	89.992	ENSFALG00000001889	UPF2	98	90.229	Ficedula_albicollis
ENSPCOG00000021656	UPF2	100	94.558	ENSFDAG00000014348	UPF2	99	94.479	Fukomys_damarensis
ENSPCOG00000021656	UPF2	99	80.205	ENSFHEG00000009826	UPF2	99	79.590	Fundulus_heteroclitus
ENSPCOG00000021656	UPF2	91	81.369	ENSGMOG00000005557	UPF2	100	79.232	Gadus_morhua
ENSPCOG00000021656	UPF2	100	91.181	ENSGALG00000033772	UPF2	99	91.024	Gallus_gallus
ENSPCOG00000021656	UPF2	100	77.500	ENSGAFG00000020867	UPF2	99	78.906	Gambusia_affinis
ENSPCOG00000021656	UPF2	90	81.881	ENSGACG00000001080	UPF2	100	79.672	Gasterosteus_aculeatus
ENSPCOG00000021656	UPF2	100	89.835	ENSGAGG00000002700	UPF2	99	89.835	Gopherus_agassizii
ENSPCOG00000021656	UPF2	100	96.197	ENSGGOG00000001479	UPF2	100	96.197	Gorilla_gorilla
ENSPCOG00000021656	UPF2	100	78.594	ENSHBUG00000004249	UPF2	100	80.234	Haplochromis_burtoni
ENSPCOG00000021656	UPF2	100	94.563	ENSHGLG00000015176	-	99	94.484	Heterocephalus_glaber_female
ENSPCOG00000021656	UPF2	100	89.984	ENSHGLG00100010036	UPF2	100	90.773	Heterocephalus_glaber_male
ENSPCOG00000021656	UPF2	100	77.977	ENSHCOG00000004025	UPF2	99	78.288	Hippocampus_comes
ENSPCOG00000021656	UPF2	100	95.110	ENSSTOG00000013075	UPF2	99	95.032	Ictidomys_tridecemlineatus
ENSPCOG00000021656	UPF2	100	93.770	ENSJJAG00000004913	Upf2	99	93.691	Jaculus_jaculus
ENSPCOG00000021656	UPF2	99	79.137	ENSKMAG00000001071	UPF2	99	79.570	Kryptolebias_marmoratus
ENSPCOG00000021656	UPF2	100	81.245	ENSLBEG00000016394	-	100	81.979	Labrus_bergylta
ENSPCOG00000021656	UPF2	82	82.711	ENSLBEG00000000728	-	93	82.809	Labrus_bergylta
ENSPCOG00000021656	UPF2	99	78.667	ENSLACG00000015945	UPF2	94	93.750	Latimeria_chalumnae
ENSPCOG00000021656	UPF2	99	83.583	ENSLOCG00000015698	UPF2	99	83.820	Lepisosteus_oculatus
ENSPCOG00000021656	UPF2	100	96.096	ENSMFAG00000043865	UPF2	100	96.096	Macaca_fascicularis
ENSPCOG00000021656	UPF2	100	95.827	ENSMMUG00000008241	UPF2	99	95.748	Macaca_mulatta
ENSPCOG00000021656	UPF2	83	98.049	ENSMNEG00000008062	UPF2	100	98.049	Macaca_nemestrina
ENSPCOG00000021656	UPF2	100	96.434	ENSMLEG00000036120	UPF2	99	97.851	Mandrillus_leucophaeus
ENSPCOG00000021656	UPF2	100	81.006	ENSMAMG00000018276	UPF2	100	81.695	Mastacembelus_armatus
ENSPCOG00000021656	UPF2	100	78.594	ENSMZEG00005021595	UPF2	99	80.234	Maylandia_zebra
ENSPCOG00000021656	UPF2	99	89.835	ENSMGAG00000004573	UPF2	99	90.071	Meleagris_gallopavo
ENSPCOG00000021656	UPF2	100	92.114	ENSMAUG00000016512	Upf2	99	92.114	Mesocricetus_auratus
ENSPCOG00000021656	UPF2	100	96.515	ENSMICG00000001716	UPF2	100	96.515	Microcebus_murinus
ENSPCOG00000021656	UPF2	100	94.479	ENSMOCG00000008263	Upf2	99	94.322	Microtus_ochrogaster
ENSPCOG00000021656	UPF2	100	81.075	ENSMMOG00000006528	UPF2	100	81.190	Mola_mola
ENSPCOG00000021656	UPF2	100	92.120	ENSMODG00000016794	UPF2	99	92.356	Monodelphis_domestica
ENSPCOG00000021656	UPF2	100	79.984	ENSMALG00000002663	UPF2	100	80.349	Monopterus_albus
ENSPCOG00000021656	UPF2	100	94.558	MGP_CAROLIEiJ_G0023157	Upf2	99	95.009	Mus_caroli
ENSPCOG00000021656	UPF2	100	94.874	ENSMUSG00000043241	Upf2	99	94.716	Mus_musculus
ENSPCOG00000021656	UPF2	100	94.479	MGP_PahariEiJ_G0019217	Upf2	99	93.927	Mus_pahari
ENSPCOG00000021656	UPF2	100	95.110	MGP_SPRETEiJ_G0024075	Upf2	99	94.953	Mus_spretus
ENSPCOG00000021656	UPF2	100	95.114	ENSMPUG00000001064	UPF2	99	95.035	Mustela_putorius_furo
ENSPCOG00000021656	UPF2	100	94.658	ENSMLUG00000000228	UPF2	100	94.501	Myotis_lucifugus
ENSPCOG00000021656	UPF2	100	78.594	ENSNBRG00000013629	UPF2	99	80.234	Neolamprologus_brichardi
ENSPCOG00000021656	UPF2	100	97.040	ENSNLEG00000012058	UPF2	100	97.040	Nomascus_leucogenys
ENSPCOG00000021656	UPF2	57	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSPCOG00000021656	UPF2	81	100.000	ENSOPRG00000006801	-	82	100.000	Ochotona_princeps
ENSPCOG00000021656	UPF2	100	94.090	ENSODEG00000001290	UPF2	99	93.932	Octodon_degus
ENSPCOG00000021656	UPF2	100	78.672	ENSONIG00000017991	UPF2	99	80.312	Oreochromis_niloticus
ENSPCOG00000021656	UPF2	100	94.279	ENSOCUG00000006230	UPF2	100	94.122	Oryctolagus_cuniculus
ENSPCOG00000021656	UPF2	100	78.566	ENSORLG00000017189	UPF2	99	79.219	Oryzias_latipes
ENSPCOG00000021656	UPF2	100	78.566	ENSORLG00020005969	UPF2	99	79.219	Oryzias_latipes_hni
ENSPCOG00000021656	UPF2	100	78.566	ENSORLG00015005713	UPF2	99	79.219	Oryzias_latipes_hsok
ENSPCOG00000021656	UPF2	100	76.365	ENSOMEG00000023420	UPF2	98	76.153	Oryzias_melastigma
ENSPCOG00000021656	UPF2	100	96.060	ENSOGAG00000005796	UPF2	99	95.981	Otolemur_garnettii
ENSPCOG00000021656	UPF2	100	94.965	ENSOARG00000014587	UPF2	99	94.886	Ovis_aries
ENSPCOG00000021656	UPF2	100	95.483	ENSPPAG00000037953	UPF2	100	95.483	Pan_paniscus
ENSPCOG00000021656	UPF2	100	94.878	ENSPPRG00000000690	UPF2	99	94.878	Panthera_pardus
ENSPCOG00000021656	UPF2	100	94.878	ENSPTIG00000008867	UPF2	99	94.878	Panthera_tigris_altaica
ENSPCOG00000021656	UPF2	100	96.197	ENSPTRG00000002291	UPF2	100	96.197	Pan_troglodytes
ENSPCOG00000021656	UPF2	100	96.434	ENSPANG00000023399	UPF2	100	96.434	Papio_anubis
ENSPCOG00000021656	UPF2	61	91.235	ENSPSIG00000015158	UPF2	95	91.235	Pelodiscus_sinensis
ENSPCOG00000021656	UPF2	93	94.461	ENSPEMG00000015731	Upf2	99	94.461	Peromyscus_maniculatus_bairdii
ENSPCOG00000021656	UPF2	100	91.805	ENSPCIG00000006656	UPF2	100	92.041	Phascolarctos_cinereus
ENSPCOG00000021656	UPF2	100	77.535	ENSPFOG00000017118	UPF2	99	79.141	Poecilia_formosa
ENSPCOG00000021656	UPF2	100	77.578	ENSPLAG00000005094	UPF2	99	79.141	Poecilia_latipinna
ENSPCOG00000021656	UPF2	100	77.535	ENSPMEG00000017009	UPF2	99	79.141	Poecilia_mexicana
ENSPCOG00000021656	UPF2	65	94.964	ENSPPYG00000002089	-	99	94.724	Pongo_abelii
ENSPCOG00000021656	UPF2	100	79.984	ENSPCAG00000000684	UPF2	99	80.221	Procavia_capensis
ENSPCOG00000021656	UPF2	100	87.323	ENSPVAG00000017286	UPF2	99	87.008	Pteropus_vampyrus
ENSPCOG00000021656	UPF2	100	76.562	ENSPNYG00000017096	UPF2	100	77.812	Pundamilia_nyererei
ENSPCOG00000021656	UPF2	100	81.392	ENSPNAG00000009357	UPF2	100	79.780	Pygocentrus_nattereri
ENSPCOG00000021656	UPF2	100	88.295	ENSRNOG00000023593	Upf2	98	100.000	Rattus_norvegicus
ENSPCOG00000021656	UPF2	100	95.400	ENSRBIG00000037780	UPF2	100	95.400	Rhinopithecus_bieti
ENSPCOG00000021656	UPF2	100	96.355	ENSRROG00000043547	UPF2	100	96.355	Rhinopithecus_roxellana
ENSPCOG00000021656	UPF2	100	98.138	ENSSBOG00000020012	UPF2	99	98.138	Saimiri_boliviensis_boliviensis
ENSPCOG00000021656	UPF2	100	79.079	ENSSFOG00015023788	upf2	100	79.173	Scleropages_formosus
ENSPCOG00000021656	UPF2	90	79.879	ENSSMAG00000007637	UPF2	100	77.674	Scophthalmus_maximus
ENSPCOG00000021656	UPF2	100	81.899	ENSSDUG00000017244	UPF2	100	82.206	Seriola_dumerili
ENSPCOG00000021656	UPF2	100	81.767	ENSSLDG00000016866	UPF2	100	82.131	Seriola_lalandi_dorsalis
ENSPCOG00000021656	UPF2	100	92.829	ENSSARG00000008615	UPF2	99	92.829	Sorex_araneus
ENSPCOG00000021656	UPF2	100	87.045	ENSSPUG00000014544	UPF2	99	86.840	Sphenodon_punctatus
ENSPCOG00000021656	UPF2	67	94.810	ENSSSCG00000011117	-	99	94.579	Sus_scrofa
ENSPCOG00000021656	UPF2	99	90.773	ENSTGUG00000002163	-	100	90.379	Taeniopygia_guttata
ENSPCOG00000021656	UPF2	100	77.804	ENSTNIG00000004453	UPF2	93	85.311	Tetraodon_nigroviridis
ENSPCOG00000021656	UPF2	93	87.288	ENSTBEG00000012679	UPF2	93	87.542	Tupaia_belangeri
ENSPCOG00000021656	UPF2	100	94.799	ENSTTRG00000016388	UPF2	99	94.720	Tursiops_truncatus
ENSPCOG00000021656	UPF2	100	95.462	ENSUAMG00000023560	UPF2	100	97.824	Ursus_americanus
ENSPCOG00000021656	UPF2	100	95.351	ENSUMAG00000012953	UPF2	95	95.193	Ursus_maritimus
ENSPCOG00000021656	UPF2	87	96.774	ENSVPAG00000006763	UPF2	83	96.774	Vicugna_pacos
ENSPCOG00000021656	UPF2	100	94.957	ENSVVUG00000006166	UPF2	99	94.878	Vulpes_vulpes
ENSPCOG00000021656	UPF2	100	82.293	ENSXETG00000033103	UPF2	94	92.000	Xenopus_tropicalis
ENSPCOG00000021656	UPF2	100	77.031	ENSXCOG00000011604	UPF2	100	78.828	Xiphophorus_couchianus
ENSPCOG00000021656	UPF2	100	77.422	ENSXMAG00000017209	UPF2	99	78.828	Xiphophorus_maculatus