EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000021795 (Gene tree)
Gene ID: 105821098
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 53694 bases
Position: chrKQ025513.1:6969618-7023311
Accession: 105821098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000019678	zf-CCCH	PF00642.24	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000030328	RC3H1-201	3187	XM_012657724	ENSPCOP00000019678	975 (aa)	XP_012513178	A0A2K6G0C7

Gene Model

Click here to download ENSPCOG00000021795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021795	RC3H1	96	96.902	ENSG00000135870	RC3H1	83	96.902	Homo_sapiens
ENSPCOG00000021795	RC3H1	96	96.150	ENSAMEG00000015657	RC3H1	83	96.150	Ailuropoda_melanoleuca
ENSPCOG00000021795	RC3H1	96	86.196	ENSAPLG00000005341	RC3H1	83	85.549	Anas_platyrhynchos
ENSPCOG00000021795	RC3H1	96	83.175	ENSACAG00000015271	RC3H1	82	82.609	Anolis_carolinensis
ENSPCOG00000021795	RC3H1	96	96.795	ENSANAG00000036716	RC3H1	83	96.795	Aotus_nancymaae
ENSPCOG00000021795	RC3H1	96	95.085	ENSBTAG00000052708	RC3H1	82	95.085	Bos_taurus
ENSPCOG00000021795	RC3H1	96	96.368	ENSCJAG00000009106	RC3H1	83	96.368	Callithrix_jacchus
ENSPCOG00000021795	RC3H1	96	96.471	ENSCAFG00000014434	RC3H1	83	96.471	Canis_familiaris
ENSPCOG00000021795	RC3H1	96	96.368	ENSCAFG00020017112	RC3H1	83	96.368	Canis_lupus_dingo
ENSPCOG00000021795	RC3H1	96	95.615	ENSCHIG00000002873	RC3H1	82	95.615	Capra_hircus
ENSPCOG00000021795	RC3H1	96	94.011	ENSTSYG00000003913	RC3H1	83	94.011	Carlito_syrichta
ENSPCOG00000021795	RC3H1	96	90.171	ENSCPOG00000004349	RC3H1	82	89.850	Cavia_porcellus
ENSPCOG00000021795	RC3H1	96	93.803	ENSCCAG00000025652	RC3H1	80	96.226	Cebus_capucinus
ENSPCOG00000021795	RC3H1	96	96.902	ENSCATG00000033497	RC3H1	83	96.902	Cercocebus_atys
ENSPCOG00000021795	RC3H1	96	94.338	ENSCLAG00000011267	RC3H1	83	94.338	Chinchilla_lanigera
ENSPCOG00000021795	RC3H1	91	96.963	ENSCSAG00000011823	RC3H1	69	96.963	Chlorocebus_sabaeus
ENSPCOG00000021795	RC3H1	96	87.686	ENSCPBG00000014670	RC3H1	83	87.049	Chrysemys_picta_bellii
ENSPCOG00000021795	RC3H1	96	97.012	ENSCANG00000032120	RC3H1	83	97.012	Colobus_angolensis_palliatus
ENSPCOG00000021795	RC3H1	96	93.262	ENSCGRG00001020812	Rc3h1	83	92.727	Cricetulus_griseus_chok1gshd
ENSPCOG00000021795	RC3H1	96	93.262	ENSCGRG00000011952	Rc3h1	83	92.727	Cricetulus_griseus_crigri
ENSPCOG00000021795	RC3H1	64	95.820	ENSDNOG00000011494	RC3H1	99	95.820	Dasypus_novemcinctus
ENSPCOG00000021795	RC3H1	96	95.187	ENSDORG00000004855	Rc3h1	83	95.080	Dipodomys_ordii
ENSPCOG00000021795	RC3H1	82	96.084	ENSETEG00000012064	RC3H1	76	96.084	Echinops_telfairi
ENSPCOG00000021795	RC3H1	96	94.973	ENSEASG00005017000	RC3H1	82	94.973	Equus_asinus_asinus
ENSPCOG00000021795	RC3H1	96	94.866	ENSECAG00000021208	RC3H1	82	94.866	Equus_caballus
ENSPCOG00000021795	RC3H1	79	100.000	ENSEEUG00000014861	RC3H1	78	100.000	Erinaceus_europaeus
ENSPCOG00000021795	RC3H1	96	96.581	ENSFCAG00000014924	RC3H1	83	96.581	Felis_catus
ENSPCOG00000021795	RC3H1	96	85.005	ENSFALG00000002947	RC3H1	83	83.615	Ficedula_albicollis
ENSPCOG00000021795	RC3H1	96	94.444	ENSFDAG00000013303	RC3H1	83	94.444	Fukomys_damarensis
ENSPCOG00000021795	RC3H1	96	85.472	ENSGALG00000004587	RC3H1	79	90.256	Gallus_gallus
ENSPCOG00000021795	RC3H1	96	85.563	ENSGAGG00000018194	RC3H1	82	85.350	Gopherus_agassizii
ENSPCOG00000021795	RC3H1	96	88.617	ENSGGOG00000005735	RC3H1	82	88.617	Gorilla_gorilla
ENSPCOG00000021795	RC3H1	86	86.873	ENSHGLG00000004183	-	92	86.873	Heterocephalus_glaber_female
ENSPCOG00000021795	RC3H1	96	93.910	ENSHGLG00100008577	RC3H1	83	93.910	Heterocephalus_glaber_male
ENSPCOG00000021795	RC3H1	96	96.047	ENSSTOG00000016033	RC3H1	83	96.047	Ictidomys_tridecemlineatus
ENSPCOG00000021795	RC3H1	96	94.011	ENSJJAG00000018915	Rc3h1	83	93.583	Jaculus_jaculus
ENSPCOG00000021795	RC3H1	96	70.798	ENSLACG00000016186	RC3H1	82	70.378	Latimeria_chalumnae
ENSPCOG00000021795	RC3H1	92	97.111	ENSLAFG00000004367	RC3H1	82	97.111	Loxodonta_africana
ENSPCOG00000021795	RC3H1	96	96.795	ENSMFAG00000033725	RC3H1	83	96.795	Macaca_fascicularis
ENSPCOG00000021795	RC3H1	96	96.688	ENSMMUG00000000630	RC3H1	83	96.688	Macaca_mulatta
ENSPCOG00000021795	RC3H1	96	96.902	ENSMNEG00000035968	RC3H1	83	96.902	Macaca_nemestrina
ENSPCOG00000021795	RC3H1	96	96.795	ENSMLEG00000037455	RC3H1	83	96.795	Mandrillus_leucophaeus
ENSPCOG00000021795	RC3H1	82	93.333	ENSMAUG00000020864	Rc3h1	81	92.704	Mesocricetus_auratus
ENSPCOG00000021795	RC3H1	96	98.289	ENSMICG00000003000	RC3H1	83	98.289	Microcebus_murinus
ENSPCOG00000021795	RC3H1	96	92.193	ENSMOCG00000016587	Rc3h1	87	91.765	Microtus_ochrogaster
ENSPCOG00000021795	RC3H1	96	90.608	ENSMODG00000004289	RC3H1	83	90.715	Monodelphis_domestica
ENSPCOG00000021795	RC3H1	96	92.299	MGP_CAROLIEiJ_G0014756	Rc3h1	83	91.765	Mus_caroli
ENSPCOG00000021795	RC3H1	96	92.193	ENSMUSG00000040423	Rc3h1	83	91.658	Mus_musculus
ENSPCOG00000021795	RC3H1	96	91.872	MGP_PahariEiJ_G0027992	Rc3h1	83	91.337	Mus_pahari
ENSPCOG00000021795	RC3H1	96	91.979	MGP_SPRETEiJ_G0015563	Rc3h1	83	91.444	Mus_spretus
ENSPCOG00000021795	RC3H1	96	95.406	ENSMPUG00000004747	RC3H1	83	95.401	Mustela_putorius_furo
ENSPCOG00000021795	RC3H1	96	95.080	ENSMLUG00000011127	RC3H1	82	95.080	Myotis_lucifugus
ENSPCOG00000021795	RC3H1	96	95.080	ENSNGAG00000011135	Rc3h1	83	94.545	Nannospalax_galili
ENSPCOG00000021795	RC3H1	96	97.009	ENSNLEG00000015327	RC3H1	83	97.009	Nomascus_leucogenys
ENSPCOG00000021795	RC3H1	96	88.223	ENSOPRG00000013068	RC3H1	82	87.794	Ochotona_princeps
ENSPCOG00000021795	RC3H1	96	93.803	ENSODEG00000014185	RC3H1	83	93.803	Octodon_degus
ENSPCOG00000021795	RC3H1	96	89.451	ENSOANG00000000924	RC3H1	83	89.662	Ornithorhynchus_anatinus
ENSPCOG00000021795	RC3H1	94	95.756	ENSOCUG00000004930	RC3H1	81	95.756	Oryctolagus_cuniculus
ENSPCOG00000021795	RC3H1	100	89.007	ENSOGAG00000004044	RC3H1	89	89.007	Otolemur_garnettii
ENSPCOG00000021795	RC3H1	96	95.546	ENSOARG00000013011	RC3H1	83	95.546	Ovis_aries
ENSPCOG00000021795	RC3H1	96	96.905	ENSPPAG00000039253	RC3H1	83	96.905	Pan_paniscus
ENSPCOG00000021795	RC3H1	96	95.936	ENSPPRG00000009007	RC3H1	82	95.936	Panthera_pardus
ENSPCOG00000021795	RC3H1	96	96.383	ENSPTIG00000015326	RC3H1	83	96.383	Panthera_tigris_altaica
ENSPCOG00000021795	RC3H1	96	96.905	ENSPTRG00000001702	RC3H1	83	96.905	Pan_troglodytes
ENSPCOG00000021795	RC3H1	96	96.795	ENSPANG00000008886	RC3H1	83	96.795	Papio_anubis
ENSPCOG00000021795	RC3H1	96	86.850	ENSPSIG00000016181	RC3H1	83	86.744	Pelodiscus_sinensis
ENSPCOG00000021795	RC3H1	96	92.620	ENSPEMG00000011966	Rc3h1	83	91.979	Peromyscus_maniculatus_bairdii
ENSPCOG00000021795	RC3H1	61	92.243	ENSPCIG00000002058	RC3H1	74	91.400	Phascolarctos_cinereus
ENSPCOG00000021795	RC3H1	96	92.842	ENSPPYG00000000490	RC3H1	80	95.991	Pongo_abelii
ENSPCOG00000021795	RC3H1	94	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSPCOG00000021795	RC3H1	93	100.000	ENSPVAG00000007593	RC3H1	89	85.882	Pteropus_vampyrus
ENSPCOG00000021795	RC3H1	97	55.911	ENSPNAG00000023439	rc3h1a	54	94.737	Pygocentrus_nattereri
ENSPCOG00000021795	RC3H1	96	96.798	ENSRBIG00000037743	RC3H1	83	96.798	Rhinopithecus_bieti
ENSPCOG00000021795	RC3H1	96	96.688	ENSRROG00000036546	RC3H1	83	96.688	Rhinopithecus_roxellana
ENSPCOG00000021795	RC3H1	96	85.517	ENSSBOG00000010664	RC3H1	88	89.850	Saimiri_boliviensis_boliviensis
ENSPCOG00000021795	RC3H1	96	89.552	ENSSHAG00000007589	RC3H1	83	89.659	Sarcophilus_harrisii
ENSPCOG00000021795	RC3H1	81	93.117	ENSSARG00000004660	RC3H1	68	93.117	Sorex_araneus
ENSPCOG00000021795	RC3H1	96	81.674	ENSSPUG00000018472	RC3H1	82	80.806	Sphenodon_punctatus
ENSPCOG00000021795	RC3H1	96	97.112	ENSSSCG00000015498	RC3H1	83	97.112	Sus_scrofa
ENSPCOG00000021795	RC3H1	96	85.881	ENSTGUG00000004090	RC3H1	83	85.016	Taeniopygia_guttata
ENSPCOG00000021795	RC3H1	88	88.966	ENSTBEG00000005015	RC3H1	76	88.966	Tupaia_belangeri
ENSPCOG00000021795	RC3H1	96	95.949	ENSTTRG00000008572	RC3H1	83	95.949	Tursiops_truncatus
ENSPCOG00000021795	RC3H1	96	95.401	ENSUAMG00000019525	RC3H1	82	95.401	Ursus_americanus
ENSPCOG00000021795	RC3H1	96	96.047	ENSUMAG00000020087	RC3H1	83	96.047	Ursus_maritimus
ENSPCOG00000021795	RC3H1	86	98.785	ENSVPAG00000002591	RC3H1	74	98.785	Vicugna_pacos
ENSPCOG00000021795	RC3H1	96	96.060	ENSVVUG00000014201	RC3H1	83	96.060	Vulpes_vulpes
ENSPCOG00000021795	RC3H1	96	75.105	ENSXETG00000020030	rc3h1	82	74.234	Xenopus_tropicalis