EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000021874 (Gene tree)
Gene ID: 105809480
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 155794 bases
Position: chrKQ021458.1:1779360-1935153
Accession: 105809480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000019837	La	PF05383.17	4.3e-22	1	1
ENSPCOP00000019840	La	PF05383.17	4.9e-22	1	1
ENSPCOP00000019839	La	PF05383.17	9.7e-22	1	1
ENSPCOP00000019838	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000030490	LARP1B-203	1557	XM_012643299	ENSPCOP00000019839	518 (aa)	XP_012498753	A0A2K6G0T0
ENSPCOT00000030491	LARP1B-204	1065	XM_012643302	ENSPCOP00000019840	354 (aa)	XP_012498756	A0A2K6G0V2
ENSPCOT00000030489	LARP1B-202	2439	-	ENSPCOP00000019838	813 (aa)	-	A0A2K6G0T5
ENSPCOT00000030488	LARP1B-201	2631	XM_012643301	ENSPCOP00000019837	335 (aa)	XP_012498755	A0A2K6G0Q4

Gene Model

Click here to download ENSPCOG00000021874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000021874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000021874	LARP1B	99	53.656	ENSPCOG00000016949	LARP1	96	53.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000021874	LARP1B	99	93.793	ENSG00000138709	LARP1B	100	92.537	Homo_sapiens
ENSPCOG00000021874	LARP1B	96	69.748	ENSAPOG00000020101	larp1b	74	67.742	Acanthochromis_polyacanthus
ENSPCOG00000021874	LARP1B	100	94.328	ENSAMEG00000002748	LARP1B	100	94.328	Ailuropoda_melanoleuca
ENSPCOG00000021874	LARP1B	95	68.421	ENSACIG00000023890	larp1b	72	65.323	Amphilophus_citrinellus
ENSPCOG00000021874	LARP1B	86	74.359	ENSAOCG00000014268	larp1b	73	74.359	Amphiprion_ocellaris
ENSPCOG00000021874	LARP1B	97	67.742	ENSAPEG00000004126	larp1b	83	47.174	Amphiprion_percula
ENSPCOG00000021874	LARP1B	98	63.571	ENSATEG00000017849	larp1b	76	60.000	Anabas_testudineus
ENSPCOG00000021874	LARP1B	96	71.774	ENSAPLG00000010129	LARP1B	86	77.679	Anas_platyrhynchos
ENSPCOG00000021874	LARP1B	92	83.696	ENSACAG00000011338	LARP1B	75	93.750	Anolis_carolinensis
ENSPCOG00000021874	LARP1B	98	83.529	ENSANAG00000034618	LARP1B	96	80.363	Aotus_nancymaae
ENSPCOG00000021874	LARP1B	96	62.500	ENSACLG00000011948	larp1b	82	45.874	Astatotilapia_calliptera
ENSPCOG00000021874	LARP1B	74	56.763	ENSAMXG00000006805	larp1b	81	46.409	Astyanax_mexicanus
ENSPCOG00000021874	LARP1B	99	95.205	ENSBTAG00000012135	LARP1B	99	90.000	Bos_taurus
ENSPCOG00000021874	LARP1B	100	93.731	ENSCJAG00000003338	LARP1B	100	93.731	Callithrix_jacchus
ENSPCOG00000021874	LARP1B	99	93.836	ENSCAFG00000003831	LARP1B	89	93.793	Canis_familiaris
ENSPCOG00000021874	LARP1B	100	94.627	ENSCAFG00020018899	LARP1B	100	94.627	Canis_lupus_dingo
ENSPCOG00000021874	LARP1B	99	94.521	ENSCHIG00000023144	LARP1B	100	91.369	Capra_hircus
ENSPCOG00000021874	LARP1B	98	87.195	ENSTSYG00000002037	-	99	83.898	Carlito_syrichta
ENSPCOG00000021874	LARP1B	76	94.643	ENSCPOG00000034668	-	93	94.643	Cavia_porcellus
ENSPCOG00000021874	LARP1B	99	93.713	ENSCCAG00000021948	LARP1B	99	93.713	Cebus_capucinus
ENSPCOG00000021874	LARP1B	99	93.793	ENSCATG00000013541	LARP1B	100	90.149	Cercocebus_atys
ENSPCOG00000021874	LARP1B	100	87.761	ENSCLAG00000006448	-	100	87.761	Chinchilla_lanigera
ENSPCOG00000021874	LARP1B	99	94.483	ENSCSAG00000003582	LARP1B	89	94.483	Chlorocebus_sabaeus
ENSPCOG00000021874	LARP1B	98	80.747	ENSCHOG00000005354	LARP1B	100	74.011	Choloepus_hoffmanni
ENSPCOG00000021874	LARP1B	99	78.027	ENSCPBG00000017480	LARP1B	77	78.125	Chrysemys_picta_bellii
ENSPCOG00000021874	LARP1B	99	94.483	ENSCANG00000026958	LARP1B	100	82.852	Colobus_angolensis_palliatus
ENSPCOG00000021874	LARP1B	100	92.239	ENSCGRG00001004660	-	100	92.239	Cricetulus_griseus_chok1gshd
ENSPCOG00000021874	LARP1B	100	91.940	ENSCGRG00000001914	-	100	91.940	Cricetulus_griseus_crigri
ENSPCOG00000021874	LARP1B	95	69.369	ENSCSEG00000013519	larp1b	85	43.640	Cynoglossus_semilaevis
ENSPCOG00000021874	LARP1B	96	68.067	ENSCVAG00000005046	larp1b	75	60.284	Cyprinodon_variegatus
ENSPCOG00000021874	LARP1B	97	62.903	ENSDARG00000061169	larp1b	76	62.903	Danio_rerio
ENSPCOG00000021874	LARP1B	98	92.378	ENSDNOG00000018765	-	100	90.607	Dasypus_novemcinctus
ENSPCOG00000021874	LARP1B	87	89.076	ENSETEG00000012497	LARP1B	77	89.076	Echinops_telfairi
ENSPCOG00000021874	LARP1B	93	66.346	ENSEBUG00000003668	larp1b	86	66.346	Eptatretus_burgeri
ENSPCOG00000021874	LARP1B	99	94.611	ENSEASG00005018106	LARP1B	99	94.611	Equus_asinus_asinus
ENSPCOG00000021874	LARP1B	98	94.817	ENSECAG00000001088	LARP1B	72	90.569	Equus_caballus
ENSPCOG00000021874	LARP1B	54	75.862	ENSELUG00000023774	larp1b	68	65.854	Esox_lucius
ENSPCOG00000021874	LARP1B	100	94.030	ENSFCAG00000014650	-	100	94.030	Felis_catus
ENSPCOG00000021874	LARP1B	99	68.605	ENSFALG00000008098	LARP1B	96	63.448	Ficedula_albicollis
ENSPCOG00000021874	LARP1B	97	67.188	ENSFHEG00000010264	larp1b	71	67.188	Fundulus_heteroclitus
ENSPCOG00000021874	LARP1B	81	73.585	ENSGMOG00000005207	larp1b	53	73.214	Gadus_morhua
ENSPCOG00000021874	LARP1B	96	72.500	ENSGALG00000010207	LARP1B	75	72.500	Gallus_gallus
ENSPCOG00000021874	LARP1B	90	66.667	ENSGAFG00000012012	larp1b	85	59.864	Gambusia_affinis
ENSPCOG00000021874	LARP1B	96	69.492	ENSGACG00000004609	larp1b	73	69.492	Gasterosteus_aculeatus
ENSPCOG00000021874	LARP1B	100	77.463	ENSGAGG00000017209	LARP1B	76	77.563	Gopherus_agassizii
ENSPCOG00000021874	LARP1B	99	93.793	ENSGGOG00000015900	LARP1B	100	92.537	Gorilla_gorilla
ENSPCOG00000021874	LARP1B	96	62.500	ENSHBUG00000009730	larp1b	72	61.594	Haplochromis_burtoni
ENSPCOG00000021874	LARP1B	98	75.000	ENSHGLG00000013922	-	97	73.939	Heterocephalus_glaber_female
ENSPCOG00000021874	LARP1B	100	86.136	ENSHGLG00000006728	-	99	86.431	Heterocephalus_glaber_female
ENSPCOG00000021874	LARP1B	100	86.866	ENSHGLG00100014041	-	99	86.486	Heterocephalus_glaber_male
ENSPCOG00000021874	LARP1B	98	75.000	ENSHGLG00100016491	-	97	73.939	Heterocephalus_glaber_male
ENSPCOG00000021874	LARP1B	72	66.942	ENSHCOG00000000918	larp1b	82	66.942	Hippocampus_comes
ENSPCOG00000021874	LARP1B	85	47.286	ENSIPUG00000012138	larp1b	71	59.859	Ictalurus_punctatus
ENSPCOG00000021874	LARP1B	91	67.974	ENSSTOG00000033183	-	97	67.114	Ictidomys_tridecemlineatus
ENSPCOG00000021874	LARP1B	99	80.665	ENSSTOG00000021917	-	94	81.873	Ictidomys_tridecemlineatus
ENSPCOG00000021874	LARP1B	93	76.038	ENSSTOG00000034510	-	89	73.574	Ictidomys_tridecemlineatus
ENSPCOG00000021874	LARP1B	100	90.179	ENSSTOG00000008596	-	100	90.179	Ictidomys_tridecemlineatus
ENSPCOG00000021874	LARP1B	99	88.922	ENSJJAG00000022360	Larp1b	99	88.922	Jaculus_jaculus
ENSPCOG00000021874	LARP1B	94	71.560	ENSKMAG00000011589	larp1b	74	70.796	Kryptolebias_marmoratus
ENSPCOG00000021874	LARP1B	96	67.797	ENSLBEG00000005655	larp1b	85	45.675	Labrus_bergylta
ENSPCOG00000021874	LARP1B	98	72.320	ENSLACG00000015247	LARP1B	99	70.588	Latimeria_chalumnae
ENSPCOG00000021874	LARP1B	97	72.868	ENSLOCG00000010684	larp1b	82	72.868	Lepisosteus_oculatus
ENSPCOG00000021874	LARP1B	99	94.643	ENSLAFG00000008473	-	99	95.152	Loxodonta_africana
ENSPCOG00000021874	LARP1B	69	90.345	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSPCOG00000021874	LARP1B	99	95.172	ENSMFAG00000002218	LARP1B	100	93.731	Macaca_fascicularis
ENSPCOG00000021874	LARP1B	99	95.172	ENSMMUG00000021347	LARP1B	100	93.731	Macaca_mulatta
ENSPCOG00000021874	LARP1B	90	95.172	ENSMNEG00000030406	LARP1B	88	95.172	Macaca_nemestrina
ENSPCOG00000021874	LARP1B	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSPCOG00000021874	LARP1B	99	95.172	ENSMLEG00000009306	LARP1B	89	95.172	Mandrillus_leucophaeus
ENSPCOG00000021874	LARP1B	98	60.870	ENSMAMG00000000081	larp1b	74	60.870	Mastacembelus_armatus
ENSPCOG00000021874	LARP1B	72	67.544	ENSMZEG00005002545	larp1b	92	54.957	Maylandia_zebra
ENSPCOG00000021874	LARP1B	93	80.645	ENSMGAG00000004809	LARP1B	86	80.645	Meleagris_gallopavo
ENSPCOG00000021874	LARP1B	100	91.343	ENSMAUG00000007879	-	100	91.343	Mesocricetus_auratus
ENSPCOG00000021874	LARP1B	100	98.507	ENSMICG00000036111	LARP1B	100	98.507	Microcebus_murinus
ENSPCOG00000021874	LARP1B	99	81.690	ENSMICG00000037883	-	97	81.408	Microcebus_murinus
ENSPCOG00000021874	LARP1B	98	73.333	ENSMICG00000028052	-	99	73.715	Microcebus_murinus
ENSPCOG00000021874	LARP1B	79	94.297	ENSMOCG00000001490	Larp1b	95	94.297	Microtus_ochrogaster
ENSPCOG00000021874	LARP1B	99	90.278	ENSMODG00000012300	LARP1B	72	90.278	Monodelphis_domestica
ENSPCOG00000021874	LARP1B	99	60.811	ENSMALG00000003638	larp1b	76	60.811	Monopterus_albus
ENSPCOG00000021874	LARP1B	100	90.149	MGP_CAROLIEiJ_G0024962	Larp1b	100	90.149	Mus_caroli
ENSPCOG00000021874	LARP1B	100	91.343	ENSMUSG00000025762	Larp1b	100	91.343	Mus_musculus
ENSPCOG00000021874	LARP1B	100	91.045	MGP_PahariEiJ_G0026403	Larp1b	100	91.045	Mus_pahari
ENSPCOG00000021874	LARP1B	100	91.343	MGP_SPRETEiJ_G0025897	Larp1b	100	91.343	Mus_spretus
ENSPCOG00000021874	LARP1B	98	95.122	ENSMPUG00000017365	LARP1B	72	92.466	Mustela_putorius_furo
ENSPCOG00000021874	LARP1B	95	96.429	ENSMLUG00000010229	LARP1B	86	96.429	Myotis_lucifugus
ENSPCOG00000021874	LARP1B	75	50.373	ENSNBRG00000023846	larp1b	77	50.549	Neolamprologus_brichardi
ENSPCOG00000021874	LARP1B	99	94.483	ENSNLEG00000013819	LARP1B	100	92.836	Nomascus_leucogenys
ENSPCOG00000021874	LARP1B	85	90.972	ENSMEUG00000010308	LARP1B	77	90.972	Notamacropus_eugenii
ENSPCOG00000021874	LARP1B	98	82.192	ENSOPRG00000005478	LARP1B	87	82.192	Ochotona_princeps
ENSPCOG00000021874	LARP1B	100	87.463	ENSODEG00000001292	-	100	87.463	Octodon_degus
ENSPCOG00000021874	LARP1B	95	66.667	ENSONIG00000012386	larp1b	83	66.667	Oreochromis_niloticus
ENSPCOG00000021874	LARP1B	98	95.427	ENSOCUG00000013330	LARP1B	87	90.269	Oryctolagus_cuniculus
ENSPCOG00000021874	LARP1B	98	60.870	ENSORLG00000017954	larp1b	74	58.333	Oryzias_latipes
ENSPCOG00000021874	LARP1B	98	57.639	ENSORLG00020013081	larp1b	74	57.639	Oryzias_latipes_hni
ENSPCOG00000021874	LARP1B	98	58.333	ENSORLG00015009580	larp1b	74	58.333	Oryzias_latipes_hsok
ENSPCOG00000021874	LARP1B	97	63.636	ENSOMEG00000004210	larp1b	73	63.636	Oryzias_melastigma
ENSPCOG00000021874	LARP1B	98	93.617	ENSOGAG00000005771	LARP1B	86	95.192	Otolemur_garnettii
ENSPCOG00000021874	LARP1B	99	93.793	ENSOARG00000015300	LARP1B	89	93.793	Ovis_aries
ENSPCOG00000021874	LARP1B	99	93.793	ENSPPAG00000030439	LARP1B	100	92.239	Pan_paniscus
ENSPCOG00000021874	LARP1B	100	94.030	ENSPPRG00000002743	-	100	94.030	Panthera_pardus
ENSPCOG00000021874	LARP1B	100	94.030	ENSPTIG00000011225	LARP1B	100	94.030	Panthera_tigris_altaica
ENSPCOG00000021874	LARP1B	100	91.940	ENSPTRG00000016437	LARP1B	100	91.940	Pan_troglodytes
ENSPCOG00000021874	LARP1B	99	95.172	ENSPANG00000012488	LARP1B	100	93.433	Papio_anubis
ENSPCOG00000021874	LARP1B	88	64.957	ENSPKIG00000014360	larp1b	88	42.754	Paramormyrops_kingsleyae
ENSPCOG00000021874	LARP1B	98	77.432	ENSPSIG00000012885	LARP1B	82	79.310	Pelodiscus_sinensis
ENSPCOG00000021874	LARP1B	76	59.859	ENSPMGG00000007207	larp1b	71	59.859	Periophthalmus_magnuspinnatus
ENSPCOG00000021874	LARP1B	93	71.111	ENSPMAG00000002700	larp1b	97	42.585	Petromyzon_marinus
ENSPCOG00000021874	LARP1B	99	87.413	ENSPCIG00000026516	LARP1B	92	85.057	Phascolarctos_cinereus
ENSPCOG00000021874	LARP1B	97	68.293	ENSPFOG00000019519	larp1b	73	68.293	Poecilia_formosa
ENSPCOG00000021874	LARP1B	97	53.172	ENSPFOG00000022837	-	77	52.799	Poecilia_formosa
ENSPCOG00000021874	LARP1B	97	68.293	ENSPLAG00000007115	larp1b	82	46.868	Poecilia_latipinna
ENSPCOG00000021874	LARP1B	97	68.293	ENSPMEG00000001224	larp1b	71	68.293	Poecilia_mexicana
ENSPCOG00000021874	LARP1B	83	52.805	ENSPREG00000005955	-	95	53.465	Poecilia_reticulata
ENSPCOG00000021874	LARP1B	98	90.214	ENSPCAG00000007546	LARP1B	89	86.677	Procavia_capensis
ENSPCOG00000021874	LARP1B	99	86.898	ENSPVAG00000005373	LARP1B	89	86.957	Pteropus_vampyrus
ENSPCOG00000021874	LARP1B	72	67.544	ENSPNYG00000017357	larp1b	81	66.129	Pundamilia_nyererei
ENSPCOG00000021874	LARP1B	95	73.333	ENSPNAG00000008823	larp1b	82	61.644	Pygocentrus_nattereri
ENSPCOG00000021874	LARP1B	100	93.433	ENSRNOG00000038366	Larp1b	100	93.433	Rattus_norvegicus
ENSPCOG00000021874	LARP1B	100	91.343	ENSRBIG00000039982	-	100	91.343	Rhinopithecus_bieti
ENSPCOG00000021874	LARP1B	100	83.881	ENSRBIG00000038568	-	92	83.881	Rhinopithecus_bieti
ENSPCOG00000021874	LARP1B	100	74.328	ENSRROG00000038525	-	96	74.328	Rhinopithecus_roxellana
ENSPCOG00000021874	LARP1B	100	93.731	ENSRROG00000030771	LARP1B	100	93.731	Rhinopithecus_roxellana
ENSPCOG00000021874	LARP1B	98	90.274	ENSSHAG00000014474	LARP1B	100	87.761	Sarcophilus_harrisii
ENSPCOG00000021874	LARP1B	96	69.828	ENSSMAG00000006347	larp1b	83	58.667	Scophthalmus_maximus
ENSPCOG00000021874	LARP1B	96	66.406	ENSSDUG00000004182	larp1b	73	64.493	Seriola_dumerili
ENSPCOG00000021874	LARP1B	76	47.632	ENSSLDG00000014613	larp1b	74	45.310	Seriola_lalandi_dorsalis
ENSPCOG00000021874	LARP1B	98	76.218	ENSSPUG00000011837	LARP1B	97	57.439	Sphenodon_punctatus
ENSPCOG00000021874	LARP1B	96	68.908	ENSSPAG00000017772	larp1b	72	68.908	Stegastes_partitus
ENSPCOG00000021874	LARP1B	73	56.790	ENSSSCG00000040491	-	89	61.233	Sus_scrofa
ENSPCOG00000021874	LARP1B	98	92.988	ENSSSCG00000034280	LARP1B	99	88.632	Sus_scrofa
ENSPCOG00000021874	LARP1B	90	69.517	ENSTGUG00000002098	-	87	63.166	Taeniopygia_guttata
ENSPCOG00000021874	LARP1B	97	67.742	ENSTRUG00000005612	larp1b	72	67.742	Takifugu_rubripes
ENSPCOG00000021874	LARP1B	95	71.930	ENSTNIG00000012398	larp1b	83	71.930	Tetraodon_nigroviridis
ENSPCOG00000021874	LARP1B	81	92.381	ENSTBEG00000004177	LARP1B	73	86.667	Tupaia_belangeri
ENSPCOG00000021874	LARP1B	96	90.411	ENSTTRG00000012984	LARP1B	85	90.411	Tursiops_truncatus
ENSPCOG00000021874	LARP1B	100	83.881	ENSUAMG00000016938	-	91	97.041	Ursus_americanus
ENSPCOG00000021874	LARP1B	98	93.902	ENSUMAG00000007373	LARP1B	87	91.781	Ursus_maritimus
ENSPCOG00000021874	LARP1B	99	90.647	ENSVPAG00000007223	LARP1B	89	90.647	Vicugna_pacos
ENSPCOG00000021874	LARP1B	99	93.836	ENSVVUG00000011307	LARP1B	100	93.333	Vulpes_vulpes
ENSPCOG00000021874	LARP1B	96	71.930	ENSXETG00000022512	larp1b	75	71.930	Xenopus_tropicalis
ENSPCOG00000021874	LARP1B	69	66.667	ENSXCOG00000004435	larp1b	57	68.908	Xiphophorus_couchianus
ENSPCOG00000021874	LARP1B	96	68.908	ENSXMAG00000008150	larp1b	71	68.908	Xiphophorus_maculatus