EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCOG00000022255 (Gene tree)
Gene ID: 105806560
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Minus strand
Length: 12913 bases
Position: chrKQ017625.1:2842490-2855402
Accession: 105806560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000020561	zf-C2H2	PF00096.26	1e-12	1	2
ENSPCOP00000020561	zf-C2H2	PF00096.26	1e-12	2	2
ENSPCOP00000020561	zf-met	PF12874.7	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000031217	PRDM12-201	1101	XM_012639701	ENSPCOP00000020561	366 (aa)	XP_012495155	A0A2K6G2W0

Gene Model

Click here to download ENSPCOG00000022255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000022255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCOG00000022255	PRDM12	68	47.273	ENSPCOG00000022828	PRDM5	93	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000022255	PRDM12	100	98.638	ENSG00000130711	PRDM12	100	98.638	Homo_sapiens
ENSPCOG00000022255	PRDM12	99	62.895	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSPCOG00000022255	PRDM12	99	75.130	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSPCOG00000022255	PRDM12	88	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSPCOG00000022255	PRDM12	99	75.452	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSPCOG00000022255	PRDM12	90	79.827	ENSACIG00000019578	prdm12b	93	79.943	Amphilophus_citrinellus
ENSPCOG00000022255	PRDM12	99	76.440	ENSAOCG00000015040	prdm12b	92	80.286	Amphiprion_ocellaris
ENSPCOG00000022255	PRDM12	100	72.135	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSPCOG00000022255	PRDM12	99	77.045	ENSAPEG00000015092	prdm12b	92	80.980	Amphiprion_percula
ENSPCOG00000022255	PRDM12	99	74.805	ENSATEG00000014595	-	96	82.371	Anabas_testudineus
ENSPCOG00000022255	PRDM12	93	99.412	ENSANAG00000020616	PRDM12	100	99.412	Aotus_nancymaae
ENSPCOG00000022255	PRDM12	99	77.989	ENSACLG00000011876	prdm12b	92	82.440	Astatotilapia_calliptera
ENSPCOG00000022255	PRDM12	89	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSPCOG00000022255	PRDM12	99	83.019	ENSAMXG00000033665	prdm12b	90	88.623	Astyanax_mexicanus
ENSPCOG00000022255	PRDM12	99	78.082	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSPCOG00000022255	PRDM12	100	98.087	ENSBTAG00000023797	PRDM12	100	98.087	Bos_taurus
ENSPCOG00000022255	PRDM12	100	97.541	ENSCJAG00000020540	PRDM12	100	97.541	Callithrix_jacchus
ENSPCOG00000022255	PRDM12	88	98.142	ENSCAFG00000023076	PRDM12	99	98.142	Canis_familiaris
ENSPCOG00000022255	PRDM12	100	99.180	ENSCAFG00020024046	PRDM12	100	99.180	Canis_lupus_dingo
ENSPCOG00000022255	PRDM12	100	98.634	ENSCHIG00000025005	PRDM12	100	98.634	Capra_hircus
ENSPCOG00000022255	PRDM12	93	92.353	ENSCPOG00000005901	PRDM12	95	98.083	Cavia_porcellus
ENSPCOG00000022255	PRDM12	100	98.361	ENSCCAG00000037485	PRDM12	100	98.361	Cebus_capucinus
ENSPCOG00000022255	PRDM12	100	98.361	ENSCATG00000020327	PRDM12	100	98.361	Cercocebus_atys
ENSPCOG00000022255	PRDM12	91	97.904	ENSCLAG00000005499	PRDM12	92	97.904	Chinchilla_lanigera
ENSPCOG00000022255	PRDM12	100	98.634	ENSCSAG00000014756	PRDM12	100	98.634	Chlorocebus_sabaeus
ENSPCOG00000022255	PRDM12	100	89.344	ENSCPBG00000022628	PRDM12	94	93.413	Chrysemys_picta_bellii
ENSPCOG00000022255	PRDM12	100	98.907	ENSCGRG00001015005	Prdm12	100	98.907	Cricetulus_griseus_chok1gshd
ENSPCOG00000022255	PRDM12	99	72.821	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSPCOG00000022255	PRDM12	99	77.333	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSPCOG00000022255	PRDM12	99	81.217	ENSDARG00000007430	prdm12b	93	86.257	Danio_rerio
ENSPCOG00000022255	PRDM12	99	97.814	ENSDNOG00000042302	PRDM12	99	97.814	Dasypus_novemcinctus
ENSPCOG00000022255	PRDM12	88	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSPCOG00000022255	PRDM12	100	98.087	ENSEASG00005008472	PRDM12	100	98.087	Equus_asinus_asinus
ENSPCOG00000022255	PRDM12	100	97.814	ENSECAG00000005933	PRDM12	100	97.814	Equus_caballus
ENSPCOG00000022255	PRDM12	99	79.420	ENSELUG00000009905	prdm12b	91	85.417	Esox_lucius
ENSPCOG00000022255	PRDM12	99	75.881	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSPCOG00000022255	PRDM12	100	98.907	ENSFCAG00000043086	PRDM12	100	98.907	Felis_catus
ENSPCOG00000022255	PRDM12	100	89.617	ENSFALG00000001445	PRDM12	84	93.713	Ficedula_albicollis
ENSPCOG00000022255	PRDM12	99	76.190	ENSFHEG00000003944	prdm12b	92	81.686	Fundulus_heteroclitus
ENSPCOG00000022255	PRDM12	99	73.402	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSPCOG00000022255	PRDM12	91	82.282	ENSGMOG00000011797	prdm12b	94	82.282	Gadus_morhua
ENSPCOG00000022255	PRDM12	100	89.617	ENSGALG00000003895	PRDM12	94	93.713	Gallus_gallus
ENSPCOG00000022255	PRDM12	100	77.600	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSPCOG00000022255	PRDM12	100	77.926	ENSGACG00000016713	prdm12b	91	83.432	Gasterosteus_aculeatus
ENSPCOG00000022255	PRDM12	100	89.617	ENSGAGG00000014083	PRDM12	94	93.713	Gopherus_agassizii
ENSPCOG00000022255	PRDM12	100	98.634	ENSGGOG00000010568	PRDM12	100	98.634	Gorilla_gorilla
ENSPCOG00000022255	PRDM12	99	76.517	ENSHBUG00000022878	prdm12b	93	80.692	Haplochromis_burtoni
ENSPCOG00000022255	PRDM12	89	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSPCOG00000022255	PRDM12	100	96.721	ENSHGLG00000013939	PRDM12	100	96.721	Heterocephalus_glaber_female
ENSPCOG00000022255	PRDM12	89	81.287	ENSHCOG00000003663	prdm12b	89	80.516	Hippocampus_comes
ENSPCOG00000022255	PRDM12	99	72.849	ENSHCOG00000021167	-	95	76.176	Hippocampus_comes
ENSPCOG00000022255	PRDM12	99	75.881	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSPCOG00000022255	PRDM12	99	82.210	ENSIPUG00000017053	prdm12b	91	87.425	Ictalurus_punctatus
ENSPCOG00000022255	PRDM12	99	94.766	ENSSTOG00000005986	PRDM12	87	99.401	Ictidomys_tridecemlineatus
ENSPCOG00000022255	PRDM12	90	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSPCOG00000022255	PRDM12	89	78.492	ENSKMAG00000016921	prdm12b	89	78.771	Kryptolebias_marmoratus
ENSPCOG00000022255	PRDM12	99	75.881	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSPCOG00000022255	PRDM12	99	74.935	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSPCOG00000022255	PRDM12	99	77.249	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSPCOG00000022255	PRDM12	99	86.575	ENSLACG00000017560	PRDM12	94	90.390	Latimeria_chalumnae
ENSPCOG00000022255	PRDM12	99	81.132	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSPCOG00000022255	PRDM12	91	98.235	ENSLAFG00000006979	PRDM12	91	98.235	Loxodonta_africana
ENSPCOG00000022255	PRDM12	100	96.458	ENSMFAG00000040322	PRDM12	100	96.458	Macaca_fascicularis
ENSPCOG00000022255	PRDM12	100	98.361	ENSMNEG00000037234	PRDM12	100	98.361	Macaca_nemestrina
ENSPCOG00000022255	PRDM12	89	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSPCOG00000022255	PRDM12	99	75.844	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSPCOG00000022255	PRDM12	89	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSPCOG00000022255	PRDM12	93	93.567	ENSMGAG00000005438	PRDM12	94	93.713	Meleagris_gallopavo
ENSPCOG00000022255	PRDM12	100	96.995	ENSMAUG00000013040	Prdm12	100	96.995	Mesocricetus_auratus
ENSPCOG00000022255	PRDM12	100	98.087	ENSMICG00000015480	PRDM12	100	98.087	Microcebus_murinus
ENSPCOG00000022255	PRDM12	98	95.531	ENSMOCG00000021026	Prdm12	93	98.827	Microtus_ochrogaster
ENSPCOG00000022255	PRDM12	100	91.530	ENSMODG00000012108	PRDM12	94	95.808	Monodelphis_domestica
ENSPCOG00000022255	PRDM12	99	65.699	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSPCOG00000022255	PRDM12	100	98.361	MGP_CAROLIEiJ_G0023414	Prdm12	100	98.361	Mus_caroli
ENSPCOG00000022255	PRDM12	100	98.361	ENSMUSG00000079466	Prdm12	100	98.361	Mus_musculus
ENSPCOG00000022255	PRDM12	100	98.361	MGP_PahariEiJ_G0024871	Prdm12	100	98.361	Mus_pahari
ENSPCOG00000022255	PRDM12	100	98.361	MGP_SPRETEiJ_G0024331	Prdm12	100	98.361	Mus_spretus
ENSPCOG00000022255	PRDM12	100	94.809	ENSNGAG00000018480	Prdm12	100	94.809	Nannospalax_galili
ENSPCOG00000022255	PRDM12	99	72.340	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSPCOG00000022255	PRDM12	99	75.393	ENSNBRG00000006727	prdm12b	93	80.000	Neolamprologus_brichardi
ENSPCOG00000022255	PRDM12	100	81.421	ENSMEUG00000003828	PRDM12	94	84.731	Notamacropus_eugenii
ENSPCOG00000022255	PRDM12	90	98.788	ENSOPRG00000008680	PRDM12	100	98.788	Ochotona_princeps
ENSPCOG00000022255	PRDM12	94	98.251	ENSODEG00000016282	PRDM12	64	98.251	Octodon_degus
ENSPCOG00000022255	PRDM12	63	89.520	ENSOANG00000001043	PRDM12	91	96.954	Ornithorhynchus_anatinus
ENSPCOG00000022255	PRDM12	86	93.610	ENSOCUG00000008241	PRDM12	98	94.754	Oryctolagus_cuniculus
ENSPCOG00000022255	PRDM12	99	72.564	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSPCOG00000022255	PRDM12	100	75.718	ENSORLG00000007114	prdm12b	92	80.980	Oryzias_latipes
ENSPCOG00000022255	PRDM12	90	80.692	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSPCOG00000022255	PRDM12	99	72.379	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSPCOG00000022255	PRDM12	99	72.564	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSPCOG00000022255	PRDM12	90	80.403	ENSORLG00015007621	prdm12b	92	80.747	Oryzias_latipes_hsok
ENSPCOG00000022255	PRDM12	99	74.036	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSPCOG00000022255	PRDM12	100	75.389	ENSOMEG00000004134	prdm12b	91	80.286	Oryzias_melastigma
ENSPCOG00000022255	PRDM12	91	100.000	ENSOGAG00000007557	PRDM12	100	100.000	Otolemur_garnettii
ENSPCOG00000022255	PRDM12	78	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSPCOG00000022255	PRDM12	100	87.193	ENSPPRG00000023024	PRDM12	92	87.193	Panthera_pardus
ENSPCOG00000022255	PRDM12	100	98.907	ENSPTRG00000021475	PRDM12	100	98.907	Pan_troglodytes
ENSPCOG00000022255	PRDM12	100	98.907	ENSPTRG00000043324	-	100	98.907	Pan_troglodytes
ENSPCOG00000022255	PRDM12	100	98.361	ENSPANG00000025967	PRDM12	100	98.361	Papio_anubis
ENSPCOG00000022255	PRDM12	99	80.526	ENSPKIG00000007228	prdm12b	94	85.632	Paramormyrops_kingsleyae
ENSPCOG00000022255	PRDM12	93	78.348	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSPCOG00000022255	PRDM12	100	88.798	ENSPSIG00000006739	PRDM12	94	92.814	Pelodiscus_sinensis
ENSPCOG00000022255	PRDM12	99	73.107	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSPCOG00000022255	PRDM12	100	77.333	ENSPMGG00000008867	prdm12b	92	82.507	Periophthalmus_magnuspinnatus
ENSPCOG00000022255	PRDM12	91	99.096	ENSPEMG00000009969	Prdm12	98	93.855	Peromyscus_maniculatus_bairdii
ENSPCOG00000022255	PRDM12	100	91.803	ENSPCIG00000024119	PRDM12	94	96.108	Phascolarctos_cinereus
ENSPCOG00000022255	PRDM12	99	77.719	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSPCOG00000022255	PRDM12	90	83.333	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSPCOG00000022255	PRDM12	97	77.174	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSPCOG00000022255	PRDM12	96	73.352	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSPCOG00000022255	PRDM12	100	77.225	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSPCOG00000022255	PRDM12	96	96.866	ENSPPYG00000019694	PRDM12	100	96.866	Pongo_abelii
ENSPCOG00000022255	PRDM12	100	98.634	ENSPVAG00000001511	PRDM12	100	98.634	Pteropus_vampyrus
ENSPCOG00000022255	PRDM12	99	75.853	ENSPNYG00000009607	prdm12b	93	79.943	Pundamilia_nyererei
ENSPCOG00000022255	PRDM12	89	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSPCOG00000022255	PRDM12	99	74.799	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSPCOG00000022255	PRDM12	99	82.842	ENSPNAG00000024532	prdm12b	91	88.922	Pygocentrus_nattereri
ENSPCOG00000022255	PRDM12	100	98.361	ENSRNOG00000009218	Prdm12	100	98.361	Rattus_norvegicus
ENSPCOG00000022255	PRDM12	87	99.369	ENSRBIG00000042712	PRDM12	91	96.960	Rhinopithecus_bieti
ENSPCOG00000022255	PRDM12	88	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSPCOG00000022255	PRDM12	100	91.008	ENSSHAG00000015972	PRDM12	94	95.224	Sarcophilus_harrisii
ENSPCOG00000022255	PRDM12	99	74.550	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSPCOG00000022255	PRDM12	93	81.395	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSPCOG00000022255	PRDM12	99	75.258	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSPCOG00000022255	PRDM12	99	78.261	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSPCOG00000022255	PRDM12	99	75.584	ENSSLDG00000009557	prdm12b	90	81.924	Seriola_lalandi_dorsalis
ENSPCOG00000022255	PRDM12	100	89.071	ENSSPUG00000013424	PRDM12	94	93.114	Sphenodon_punctatus
ENSPCOG00000022255	PRDM12	99	65.803	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSPCOG00000022255	PRDM12	99	75.979	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSPCOG00000022255	PRDM12	100	99.180	ENSSSCG00000005703	PRDM12	100	99.180	Sus_scrofa
ENSPCOG00000022255	PRDM12	99	75.067	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSPCOG00000022255	PRDM12	99	76.842	ENSTRUG00000018659	prdm12b	92	82.405	Takifugu_rubripes
ENSPCOG00000022255	PRDM12	99	77.165	ENSTNIG00000009020	prdm12b	91	83.481	Tetraodon_nigroviridis
ENSPCOG00000022255	PRDM12	99	75.202	ENSTNIG00000005859	-	92	80.909	Tetraodon_nigroviridis
ENSPCOG00000022255	PRDM12	95	98.854	ENSUAMG00000009653	PRDM12	97	98.854	Ursus_americanus
ENSPCOG00000022255	PRDM12	91	100.000	ENSVVUG00000027662	PRDM12	79	100.000	Vulpes_vulpes
ENSPCOG00000022255	PRDM12	100	78.016	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSPCOG00000022255	PRDM12	99	74.479	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSPCOG00000022255	PRDM12	99	77.600	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus