EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCOG00000022473 (Gene tree)
Gene ID: 105821482
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Propithecus_coquereli
Status: putative
Strand: Plus strand
Length: 58848 bases
Position: chrKQ014762.1:378417-437264
Accession: 105821482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCOP00000021001	SRP54	PF00448.22	2e-78	1	1
ENSPCOP00000021002	SRP54	PF00448.22	2.3e-78	1	1
ENSPCOP00000021002	SRP54_N	PF02881.19	1.8e-20	1	1
ENSPCOP00000021001	SRP54_N	PF02881.19	1.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCOT00000031660	SRP54-203	993	XM_012658166	ENSPCOP00000021003	235 (aa)	XP_012513620	A0A2K6G452
ENSPCOT00000031659	SRP54-202	1500	XM_012658187	ENSPCOP00000021002	499 (aa)	XP_012513641	A0A2K6G446
ENSPCOT00000031658	SRP54-201	1533	-	ENSPCOP00000021001	510 (aa)	-	A0A2K6G448

Gene Model

Click here to download ENSPCOG00000022473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCOG00000022473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCOG00000022473	SRP54	100	98.020	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPCOG00000022473	SRP54	100	93.861	ENSAPOG00000011314	srp54	100	93.861	Acanthochromis_polyacanthus
ENSPCOG00000022473	SRP54	100	98.020	ENSAMEG00000015544	SRP54	100	98.020	Ailuropoda_melanoleuca
ENSPCOG00000022473	SRP54	89	92.444	ENSACIG00000022831	srp54	97	92.444	Amphilophus_citrinellus
ENSPCOG00000022473	SRP54	100	93.861	ENSAOCG00000019401	srp54	100	93.861	Amphiprion_ocellaris
ENSPCOG00000022473	SRP54	100	93.861	ENSAPEG00000001977	srp54	100	93.861	Amphiprion_percula
ENSPCOG00000022473	SRP54	100	94.257	ENSATEG00000013877	srp54	100	94.257	Anabas_testudineus
ENSPCOG00000022473	SRP54	97	96.806	ENSAPLG00000010125	SRP54	100	96.806	Anas_platyrhynchos
ENSPCOG00000022473	SRP54	86	93.333	ENSACAG00000010631	-	100	93.333	Anolis_carolinensis
ENSPCOG00000022473	SRP54	100	96.634	ENSACAG00000002103	-	100	96.634	Anolis_carolinensis
ENSPCOG00000022473	SRP54	66	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSPCOG00000022473	SRP54	100	98.020	ENSANAG00000022133	SRP54	100	98.020	Aotus_nancymaae
ENSPCOG00000022473	SRP54	100	94.059	ENSACLG00000015866	srp54	100	94.059	Astatotilapia_calliptera
ENSPCOG00000022473	SRP54	100	93.663	ENSAMXG00000032669	SRP54	100	93.663	Astyanax_mexicanus
ENSPCOG00000022473	SRP54	100	98.020	ENSBTAG00000019085	SRP54	100	98.020	Bos_taurus
ENSPCOG00000022473	SRP54	98	70.341	WBGene00009012	F21D5.7	100	70.341	Caenorhabditis_elegans
ENSPCOG00000022473	SRP54	100	98.020	ENSCJAG00000006581	SRP54	100	98.020	Callithrix_jacchus
ENSPCOG00000022473	SRP54	100	98.020	ENSCAFG00000013331	SRP54	100	98.020	Canis_familiaris
ENSPCOG00000022473	SRP54	100	98.020	ENSCAFG00020023427	SRP54	100	98.020	Canis_lupus_dingo
ENSPCOG00000022473	SRP54	100	98.020	ENSCHIG00000026345	SRP54	100	98.020	Capra_hircus
ENSPCOG00000022473	SRP54	100	97.822	ENSTSYG00000002680	-	100	97.822	Carlito_syrichta
ENSPCOG00000022473	SRP54	94	87.660	ENSTSYG00000035333	-	97	85.306	Carlito_syrichta
ENSPCOG00000022473	SRP54	94	63.747	ENSCAPG00000008780	SRP54	100	63.747	Cavia_aperea
ENSPCOG00000022473	SRP54	100	97.624	ENSCPOG00000003691	SRP54	100	97.624	Cavia_porcellus
ENSPCOG00000022473	SRP54	83	97.852	ENSCCAG00000024179	SRP54	100	97.852	Cebus_capucinus
ENSPCOG00000022473	SRP54	100	98.020	ENSCATG00000034083	SRP54	100	98.020	Cercocebus_atys
ENSPCOG00000022473	SRP54	100	98.020	ENSCLAG00000015076	SRP54	100	98.020	Chinchilla_lanigera
ENSPCOG00000022473	SRP54	100	98.020	ENSCSAG00000015575	SRP54	100	98.020	Chlorocebus_sabaeus
ENSPCOG00000022473	SRP54	95	85.892	ENSCHOG00000008986	SRP54	100	85.892	Choloepus_hoffmanni
ENSPCOG00000022473	SRP54	100	97.228	ENSCPBG00000026195	SRP54	100	97.228	Chrysemys_picta_bellii
ENSPCOG00000022473	SRP54	100	80.000	ENSCING00000007380	-	100	80.000	Ciona_intestinalis
ENSPCOG00000022473	SRP54	100	98.020	ENSCANG00000028532	SRP54	100	98.020	Colobus_angolensis_palliatus
ENSPCOG00000022473	SRP54	100	97.624	ENSCGRG00001009525	-	100	97.624	Cricetulus_griseus_chok1gshd
ENSPCOG00000022473	SRP54	76	96.891	ENSCGRG00000009453	-	89	96.891	Cricetulus_griseus_crigri
ENSPCOG00000022473	SRP54	100	93.069	ENSCSEG00000012392	srp54	100	93.069	Cynoglossus_semilaevis
ENSPCOG00000022473	SRP54	100	93.861	ENSCVAG00000010395	srp54	100	93.861	Cyprinodon_variegatus
ENSPCOG00000022473	SRP54	100	94.059	ENSDARG00000098367	srp54	100	94.059	Danio_rerio
ENSPCOG00000022473	SRP54	100	98.020	ENSDNOG00000032525	SRP54	100	98.020	Dasypus_novemcinctus
ENSPCOG00000022473	SRP54	89	85.202	ENSDORG00000005159	-	97	85.202	Dipodomys_ordii
ENSPCOG00000022473	SRP54	96	76.337	FBgn0010747	Srp54k	98	75.952	Drosophila_melanogaster
ENSPCOG00000022473	SRP54	100	96.832	ENSETEG00000016307	-	100	96.832	Echinops_telfairi
ENSPCOG00000022473	SRP54	83	57.212	ENSETEG00000012102	-	99	57.212	Echinops_telfairi
ENSPCOG00000022473	SRP54	100	85.743	ENSEBUG00000009437	-	100	85.743	Eptatretus_burgeri
ENSPCOG00000022473	SRP54	100	98.020	ENSEASG00005002057	SRP54	100	98.020	Equus_asinus_asinus
ENSPCOG00000022473	SRP54	99	97.796	ENSECAG00000018042	SRP54	98	97.796	Equus_caballus
ENSPCOG00000022473	SRP54	100	81.386	ENSEEUG00000001511	SRP54	100	81.386	Erinaceus_europaeus
ENSPCOG00000022473	SRP54	100	93.267	ENSELUG00000003395	srp54	100	93.267	Esox_lucius
ENSPCOG00000022473	SRP54	100	97.822	ENSFCAG00000032033	SRP54	100	97.822	Felis_catus
ENSPCOG00000022473	SRP54	100	96.832	ENSFALG00000005995	SRP54	100	96.832	Ficedula_albicollis
ENSPCOG00000022473	SRP54	100	98.020	ENSFDAG00000016767	SRP54	100	98.020	Fukomys_damarensis
ENSPCOG00000022473	SRP54	100	93.465	ENSFHEG00000004263	srp54	100	93.465	Fundulus_heteroclitus
ENSPCOG00000022473	SRP54	95	88.100	ENSGMOG00000011391	srp54	100	88.100	Gadus_morhua
ENSPCOG00000022473	SRP54	100	96.832	ENSGALG00000023135	SRP54	100	96.832	Gallus_gallus
ENSPCOG00000022473	SRP54	100	94.059	ENSGAFG00000011586	srp54	100	94.059	Gambusia_affinis
ENSPCOG00000022473	SRP54	100	93.465	ENSGACG00000004181	srp54	100	93.465	Gasterosteus_aculeatus
ENSPCOG00000022473	SRP54	100	97.228	ENSGAGG00000014766	SRP54	100	97.228	Gopherus_agassizii
ENSPCOG00000022473	SRP54	100	98.020	ENSGGOG00000002926	SRP54	100	98.020	Gorilla_gorilla
ENSPCOG00000022473	SRP54	100	94.059	ENSHBUG00000005678	srp54	100	94.059	Haplochromis_burtoni
ENSPCOG00000022473	SRP54	100	98.020	ENSHGLG00000002850	SRP54	100	98.020	Heterocephalus_glaber_female
ENSPCOG00000022473	SRP54	100	67.787	ENSHGLG00100007281	-	100	67.787	Heterocephalus_glaber_male
ENSPCOG00000022473	SRP54	100	98.020	ENSHGLG00100005263	SRP54	100	98.020	Heterocephalus_glaber_male
ENSPCOG00000022473	SRP54	100	92.277	ENSHCOG00000021127	srp54	100	92.277	Hippocampus_comes
ENSPCOG00000022473	SRP54	100	93.465	ENSIPUG00000001420	srp54	100	93.465	Ictalurus_punctatus
ENSPCOG00000022473	SRP54	100	98.020	ENSSTOG00000016023	SRP54	100	98.020	Ictidomys_tridecemlineatus
ENSPCOG00000022473	SRP54	100	92.871	ENSJJAG00000013417	-	100	92.871	Jaculus_jaculus
ENSPCOG00000022473	SRP54	87	75.744	ENSJJAG00000016404	-	100	75.744	Jaculus_jaculus
ENSPCOG00000022473	SRP54	100	93.465	ENSKMAG00000007707	srp54	100	93.465	Kryptolebias_marmoratus
ENSPCOG00000022473	SRP54	100	93.861	ENSLBEG00000018690	srp54	100	93.861	Labrus_bergylta
ENSPCOG00000022473	SRP54	100	93.861	ENSLBEG00000021122	srp54	100	93.861	Labrus_bergylta
ENSPCOG00000022473	SRP54	100	94.059	ENSLACG00000017890	SRP54	100	94.059	Latimeria_chalumnae
ENSPCOG00000022473	SRP54	100	94.851	ENSLOCG00000009440	srp54	100	94.851	Lepisosteus_oculatus
ENSPCOG00000022473	SRP54	100	98.020	ENSLAFG00000012007	SRP54	100	98.020	Loxodonta_africana
ENSPCOG00000022473	SRP54	100	98.020	ENSMFAG00000044371	SRP54	100	98.020	Macaca_fascicularis
ENSPCOG00000022473	SRP54	100	98.020	ENSMMUG00000015073	FAM177A1	100	98.020	Macaca_mulatta
ENSPCOG00000022473	SRP54	100	98.020	ENSMNEG00000006947	SRP54	100	98.020	Macaca_nemestrina
ENSPCOG00000022473	SRP54	100	98.020	ENSMLEG00000042251	SRP54	100	98.020	Mandrillus_leucophaeus
ENSPCOG00000022473	SRP54	100	94.059	ENSMAMG00000004803	srp54	100	94.059	Mastacembelus_armatus
ENSPCOG00000022473	SRP54	100	94.059	ENSMZEG00005027528	srp54	100	94.059	Maylandia_zebra
ENSPCOG00000022473	SRP54	100	92.110	ENSMGAG00000012481	SRP54	100	92.110	Meleagris_gallopavo
ENSPCOG00000022473	SRP54	100	97.822	ENSMAUG00000014447	-	100	97.822	Mesocricetus_auratus
ENSPCOG00000022473	SRP54	100	98.020	ENSMICG00000010270	SRP54	100	98.020	Microcebus_murinus
ENSPCOG00000022473	SRP54	87	97.506	ENSMOCG00000000948	-	100	97.506	Microtus_ochrogaster
ENSPCOG00000022473	SRP54	89	91.964	ENSMMOG00000020303	srp54	98	91.964	Mola_mola
ENSPCOG00000022473	SRP54	100	97.822	ENSMODG00000012925	-	100	97.822	Monodelphis_domestica
ENSPCOG00000022473	SRP54	100	97.822	ENSMODG00000023150	-	100	97.822	Monodelphis_domestica
ENSPCOG00000022473	SRP54	89	92.428	ENSMALG00000009163	srp54	99	92.428	Monopterus_albus
ENSPCOG00000022473	SRP54	100	97.822	MGP_CAROLIEiJ_G0017754	-	100	97.822	Mus_caroli
ENSPCOG00000022473	SRP54	100	97.030	ENSMUSG00000079108	Srp54c	100	97.030	Mus_musculus
ENSPCOG00000022473	SRP54	100	97.822	ENSMUSG00000073079	Srp54a	100	97.822	Mus_musculus
ENSPCOG00000022473	SRP54	100	97.822	ENSMUSG00000112449	Srp54b	100	97.822	Mus_musculus
ENSPCOG00000022473	SRP54	100	97.822	MGP_PahariEiJ_G0029510	-	100	97.822	Mus_pahari
ENSPCOG00000022473	SRP54	100	98.020	ENSMPUG00000016302	SRP54	100	98.020	Mustela_putorius_furo
ENSPCOG00000022473	SRP54	100	97.426	ENSMLUG00000008958	SRP54	100	97.426	Myotis_lucifugus
ENSPCOG00000022473	SRP54	100	87.921	ENSNGAG00000019806	-	100	87.921	Nannospalax_galili
ENSPCOG00000022473	SRP54	87	93.424	ENSNBRG00000006000	srp54	100	93.424	Neolamprologus_brichardi
ENSPCOG00000022473	SRP54	100	98.020	ENSNLEG00000003496	SRP54	100	98.020	Nomascus_leucogenys
ENSPCOG00000022473	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPCOG00000022473	SRP54	57	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPCOG00000022473	SRP54	100	98.020	ENSODEG00000004865	SRP54	100	98.020	Octodon_degus
ENSPCOG00000022473	SRP54	100	94.059	ENSONIG00000011768	srp54	100	94.059	Oreochromis_niloticus
ENSPCOG00000022473	SRP54	100	98.020	ENSOANG00000014051	SRP54	100	98.020	Ornithorhynchus_anatinus
ENSPCOG00000022473	SRP54	100	97.426	ENSOCUG00000007838	SRP54	100	97.426	Oryctolagus_cuniculus
ENSPCOG00000022473	SRP54	100	93.861	ENSORLG00000010027	srp54	100	93.861	Oryzias_latipes
ENSPCOG00000022473	SRP54	100	93.861	ENSORLG00020001878	srp54	100	93.861	Oryzias_latipes_hni
ENSPCOG00000022473	SRP54	100	93.861	ENSORLG00015021866	srp54	100	93.861	Oryzias_latipes_hsok
ENSPCOG00000022473	SRP54	100	93.663	ENSOMEG00000020952	srp54	100	93.663	Oryzias_melastigma
ENSPCOG00000022473	SRP54	100	98.020	ENSOGAG00000012188	SRP54	100	98.020	Otolemur_garnettii
ENSPCOG00000022473	SRP54	100	98.020	ENSOARG00000007160	SRP54	100	98.020	Ovis_aries
ENSPCOG00000022473	SRP54	100	98.020	ENSPPAG00000017434	SRP54	100	98.020	Pan_paniscus
ENSPCOG00000022473	SRP54	100	96.832	ENSPPRG00000014047	SRP54	100	96.832	Panthera_pardus
ENSPCOG00000022473	SRP54	100	97.822	ENSPTIG00000000744	SRP54	96	97.822	Panthera_tigris_altaica
ENSPCOG00000022473	SRP54	100	98.020	ENSPTRG00000006259	FAM177A1	100	98.020	Pan_troglodytes
ENSPCOG00000022473	SRP54	100	98.020	ENSPANG00000023853	SRP54	100	98.020	Papio_anubis
ENSPCOG00000022473	SRP54	100	93.663	ENSPKIG00000001953	srp54	100	93.663	Paramormyrops_kingsleyae
ENSPCOG00000022473	SRP54	100	97.030	ENSPSIG00000006476	SRP54	100	97.030	Pelodiscus_sinensis
ENSPCOG00000022473	SRP54	91	90.889	ENSPMGG00000004127	srp54	99	90.889	Periophthalmus_magnuspinnatus
ENSPCOG00000022473	SRP54	100	84.950	ENSPEMG00000019634	-	100	84.950	Peromyscus_maniculatus_bairdii
ENSPCOG00000022473	SRP54	100	86.931	ENSPMAG00000006078	-	100	86.931	Petromyzon_marinus
ENSPCOG00000022473	SRP54	100	97.822	ENSPCIG00000016175	SRP54	100	97.822	Phascolarctos_cinereus
ENSPCOG00000022473	SRP54	100	94.059	ENSPFOG00000008870	srp54	100	94.059	Poecilia_formosa
ENSPCOG00000022473	SRP54	100	94.059	ENSPLAG00000009889	srp54	100	94.059	Poecilia_latipinna
ENSPCOG00000022473	SRP54	100	94.059	ENSPMEG00000008601	srp54	100	94.059	Poecilia_mexicana
ENSPCOG00000022473	SRP54	100	94.059	ENSPREG00000004505	srp54	100	94.059	Poecilia_reticulata
ENSPCOG00000022473	SRP54	100	92.871	ENSPPYG00000005739	SRP54	100	92.871	Pongo_abelii
ENSPCOG00000022473	SRP54	100	93.861	ENSPCAG00000006268	SRP54	100	93.861	Procavia_capensis
ENSPCOG00000022473	SRP54	64	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSPCOG00000022473	SRP54	100	94.059	ENSPNYG00000009717	srp54	100	94.059	Pundamilia_nyererei
ENSPCOG00000022473	SRP54	100	93.861	ENSPNAG00000008544	srp54	100	93.861	Pygocentrus_nattereri
ENSPCOG00000022473	SRP54	100	97.624	ENSRNOG00000032776	Srp54a	100	97.624	Rattus_norvegicus
ENSPCOG00000022473	SRP54	100	98.020	ENSRROG00000041292	SRP54	100	98.020	Rhinopithecus_roxellana
ENSPCOG00000022473	SRP54	86	51.927	YPR088C	SRP54	95	47.318	Saccharomyces_cerevisiae
ENSPCOG00000022473	SRP54	96	96.964	ENSSBOG00000035145	SRP54	100	97.895	Saimiri_boliviensis_boliviensis
ENSPCOG00000022473	SRP54	69	100.000	ENSSHAG00000000671	SRP54	100	100.000	Sarcophilus_harrisii
ENSPCOG00000022473	SRP54	100	94.257	ENSSFOG00015013920	srp54	100	94.257	Scleropages_formosus
ENSPCOG00000022473	SRP54	100	88.037	ENSSMAG00000002441	srp54	100	88.037	Scophthalmus_maximus
ENSPCOG00000022473	SRP54	100	93.663	ENSSDUG00000018586	srp54	100	93.663	Seriola_dumerili
ENSPCOG00000022473	SRP54	100	93.465	ENSSLDG00000010476	srp54	100	93.465	Seriola_lalandi_dorsalis
ENSPCOG00000022473	SRP54	100	98.020	ENSSARG00000002744	SRP54	100	98.020	Sorex_araneus
ENSPCOG00000022473	SRP54	100	97.228	ENSSPUG00000013101	SRP54	100	97.228	Sphenodon_punctatus
ENSPCOG00000022473	SRP54	100	93.861	ENSSPAG00000002354	srp54	100	93.861	Stegastes_partitus
ENSPCOG00000022473	SRP54	100	98.020	ENSSSCG00000001955	SRP54	100	98.020	Sus_scrofa
ENSPCOG00000022473	SRP54	97	96.806	ENSTGUG00000011945	-	100	96.806	Taeniopygia_guttata
ENSPCOG00000022473	SRP54	100	93.069	ENSTRUG00000007057	srp54	100	93.069	Takifugu_rubripes
ENSPCOG00000022473	SRP54	100	92.673	ENSTNIG00000002589	srp54	100	92.673	Tetraodon_nigroviridis
ENSPCOG00000022473	SRP54	89	89.286	ENSTBEG00000011409	SRP54	100	89.286	Tupaia_belangeri
ENSPCOG00000022473	SRP54	100	87.921	ENSTTRG00000000928	SRP54	100	87.921	Tursiops_truncatus
ENSPCOG00000022473	SRP54	52	96.198	ENSUAMG00000012385	SRP54	100	96.198	Ursus_americanus
ENSPCOG00000022473	SRP54	100	98.020	ENSUMAG00000011234	SRP54	100	98.020	Ursus_maritimus
ENSPCOG00000022473	SRP54	94	97.684	ENSVPAG00000005668	SRP54	100	97.684	Vicugna_pacos
ENSPCOG00000022473	SRP54	100	98.020	ENSVVUG00000019962	SRP54	100	98.020	Vulpes_vulpes
ENSPCOG00000022473	SRP54	100	80.315	ENSXETG00000012290	srp54	100	80.315	Xenopus_tropicalis
ENSPCOG00000022473	SRP54	88	93.694	ENSXCOG00000004658	srp54	96	93.694	Xiphophorus_couchianus
ENSPCOG00000022473	SRP54	100	94.059	ENSXMAG00000018315	srp54	100	94.059	Xiphophorus_maculatus